| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126454589
Identifier: 126454589
GI number: 126454589
Start: 403591
End: 404583
Strand: Direct
Name: 126454589
Synonym: BURPS1106A_0438
Alternate gene names: NA
Gene position: 403591-404583 (Clockwise)
Preceding gene: 126451796
Following gene: 126453469
Centisome position: 10.12
GC content: 69.39
Gene sequence:
>993_bases ATGAAACTTGCTTCGCTCAAGGACGGCACGCGCGACGGCCAACTGATCGTCGTCTCGCGCGACCTGCACACGGCGGCGAT CGCCGACGCGATCGCGCCGACGCTGCAGCGCGTGCTCGACGACTGGGCGTTCTACGCGCCGCAGCTGCGCGACCTGTACG ACGCACTGAACCACGGCCGCGCGCGCAACGCGTTCGCGTTCGAGCCCGCCGATTGCATGGCGCCGCTGCCGCGCGCGTTC CAGTGGGCGGACGGCTCCGCGTACGTGAACCACGTCGAGCTCGTGCGCCGCGCGCGCGGCGCCGAGATGCCGCCCGAGTT CTGGACCGATCCGCTGATGTACCAGGGCGGCAGCGACGATTTCCTCGGCCCGCGCGACGACATCGTCTGCGCATCGGAGG CGTGGGGCATCGATTTCGAGGCGGAAGTCGCGGTGATCACGGCCGACGTGCCGATGGGCGCCGCGCCCGACGAGGCGCTG AAAGCGGTGCGGCTCGTCACGCTCGTGAACGACGTGTCGCTGCGCAACCTGATTCCCGCCGAGCTCGCGAAGGGCTTCGG CTTCTTCCAGAGCAAGCCGGCGAGCGCGTTCGCGCCGGTGGCCGTGACGCCCGACGAGCTCGGCGAGCACTGGCGCGAAG GCCGCCTGCATCGCCCGATGCTCGTCCACTGGAACGGCAAGAAGGTCGGTCAGCCGGATGCGGGCGTCGACATGGTGTTT CACTTCGGTCAACTGATCGCGCACGCGGCGAAGACGCGCAACGTGCGCGCGGGCTCGATCGTCGGCTCGGGCACGGTGTC GAACAAGGATGCGAAGCGCGGCTACTGCTGCATCGCCGAGAAGCGCTGCCTCGAGACGATCGAGCACGGCGCGCCGCAGA CCGAGTTCATGCGCTACGGCGACAGGGTGAAGATCGAGATGGTCGACGAGGCGGGGAAGTCGATCTTCGGCGCGATCGAG CAGGCGGTCGCGCCGCTGGACGCCGCCGCTTGA
Upstream 100 bases:
>100_bases GGAAGAATGGGGAGGGGGCGGCTCGCGGCGCGGGCCGCCGTGCGGATTCACCATCGTAAAATAGATTCCTTCCATCGTCA CTACAACGGCTCATTTCCCT
Downstream 100 bases:
>100_bases CACGGCCATGCGAACGGGCGGCCACGCGGCGGCCGTGCGGCGGCCGTGCGGGCGCGCACGCAAGCGTGCGGCGCCGCCCG GGCCGGATTGCCCGCCGGGC
Product: fumarylacetoacetate hydrolase family protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Hydroxylase; 2-Keto-4-Pentenoate Hydratase; Fumarylacetoacetase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate Hydrolase Domain-Containing; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKLASLKDGTRDGQLIVVSRDLHTAAIADAIAPTLQRVLDDWAFYAPQLRDLYDALNHGRARNAFAFEPADCMAPLPRAF QWADGSAYVNHVELVRRARGAEMPPEFWTDPLMYQGGSDDFLGPRDDIVCASEAWGIDFEAEVAVITADVPMGAAPDEAL KAVRLVTLVNDVSLRNLIPAELAKGFGFFQSKPASAFAPVAVTPDELGEHWREGRLHRPMLVHWNGKKVGQPDAGVDMVF HFGQLIAHAAKTRNVRAGSIVGSGTVSNKDAKRGYCCIAEKRCLETIEHGAPQTEFMRYGDRVKIEMVDEAGKSIFGAIE QAVAPLDAAA
Sequences:
>Translated_330_residues MKLASLKDGTRDGQLIVVSRDLHTAAIADAIAPTLQRVLDDWAFYAPQLRDLYDALNHGRARNAFAFEPADCMAPLPRAF QWADGSAYVNHVELVRRARGAEMPPEFWTDPLMYQGGSDDFLGPRDDIVCASEAWGIDFEAEVAVITADVPMGAAPDEAL KAVRLVTLVNDVSLRNLIPAELAKGFGFFQSKPASAFAPVAVTPDELGEHWREGRLHRPMLVHWNGKKVGQPDAGVDMVF HFGQLIAHAAKTRNVRAGSIVGSGTVSNKDAKRGYCCIAEKRCLETIEHGAPQTEFMRYGDRVKIEMVDEAGKSIFGAIE QAVAPLDAAA >Mature_330_residues MKLASLKDGTRDGQLIVVSRDLHTAAIADAIAPTLQRVLDDWAFYAPQLRDLYDALNHGRARNAFAFEPADCMAPLPRAF QWADGSAYVNHVELVRRARGAEMPPEFWTDPLMYQGGSDDFLGPRDDIVCASEAWGIDFEAEVAVITADVPMGAAPDEAL KAVRLVTLVNDVSLRNLIPAELAKGFGFFQSKPASAFAPVAVTPDELGEHWREGRLHRPMLVHWNGKKVGQPDAGVDMVF HFGQLIAHAAKTRNVRAGSIVGSGTVSNKDAKRGYCCIAEKRCLETIEHGAPQTEFMRYGDRVKIEMVDEAGKSIFGAIE QAVAPLDAAA
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35954; Mature: 35954
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLASLKDGTRDGQLIVVSRDLHTAAIADAIAPTLQRVLDDWAFYAPQLRDLYDALNHGR CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC ARNAFAFEPADCMAPLPRAFQWADGSAYVNHVELVRRARGAEMPPEFWTDPLMYQGGSDD CCCCCEECCHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCEECCCCCC FLGPRDDIVCASEAWGIDFEAEVAVITADVPMGAAPDEALKAVRLVTLVNDVSLRNLIPA CCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH ELAKGFGFFQSKPASAFAPVAVTPDELGEHWREGRLHRPMLVHWNGKKVGQPDAGVDMVF HHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHH HFGQLIAHAAKTRNVRAGSIVGSGTVSNKDAKRGYCCIAEKRCLETIEHGAPQTEFMRYG HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHCC DRVKIEMVDEAGKSIFGAIEQAVAPLDAAA CEEEEEEHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLASLKDGTRDGQLIVVSRDLHTAAIADAIAPTLQRVLDDWAFYAPQLRDLYDALNHGR CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC ARNAFAFEPADCMAPLPRAFQWADGSAYVNHVELVRRARGAEMPPEFWTDPLMYQGGSDD CCCCCEECCHHHHCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCEECCCCCC FLGPRDDIVCASEAWGIDFEAEVAVITADVPMGAAPDEALKAVRLVTLVNDVSLRNLIPA CCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH ELAKGFGFFQSKPASAFAPVAVTPDELGEHWREGRLHRPMLVHWNGKKVGQPDAGVDMVF HHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHH HFGQLIAHAAKTRNVRAGSIVGSGTVSNKDAKRGYCCIAEKRCLETIEHGAPQTEFMRYG HHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHCC DRVKIEMVDEAGKSIFGAIEQAVAPLDAAA CEEEEEEHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA