| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454480
Identifier: 126454480
GI number: 126454480
Start: 2240211
End: 2241959
Strand: Direct
Name: 126454480
Synonym: BURPS1106A_2254
Alternate gene names: NA
Gene position: 2240211-2241959 (Clockwise)
Preceding gene: 126453844
Following gene: 126452070
Centisome position: 56.17
GC content: 69.58
Gene sequence:
>1749_bases ATGAAGCCTGTCGTTCGCCTTACCGCTTCCGCCACCCGCGCGCTGCCGCGCTGGCTGCTGCTCACGCTCTGCATCGTCTA CGCGGCGTTCGGGCTGTTCGGCCGCGATCCGTGGAAGAACGAGGACGCGGCAGGCTTCGGCGTGATGTGGACGATGGCGC AAGGCGGCCTGCACGACTGGCTGCTGCCCAATCTCGTCGGCAAATTCGTCACGTCCGACGGGCCGCTCGGCTACTGGCTC GGCGGCCTCGCGATTCGCGCGCTGCCGTGGGTCGACGCGAGCAACGCGTCGCGCGTCTACACGGGTGTGCTGTTCTGCGT CGCGTGCGCATTCGTCTGGTACGCGGCCTATCTGCTCGGCCGGCGCGCCGAGATCCAGCCGTTCAAGTACGCGTTCGGCG GCGAGCCCGAGCCGCGCGACTACGGGCGCACGCTCGCCGACGGCGCGCTGCTCGTGCTGCTCGCGTGCTTCGGCCTTGCC GAGCGCGGCCACGAAACGACGCCGCAGCTCGCGCAGTTCGCATGCATCGCGACGTTCGTCTACGGACTCGTGCGCGCGAT CGACAAGCCGACGCAAGGCGCGCTCTGGTGGGGCCTCGCGCTCGGCCTCGTCGCGCTGTCGGGCAACCCGGTGCTCGTCG CCGCGCTCGCGCTCGGCACGCTCGCGCTCTATCTCGTCACGCCCGAGATCCGCTGCGTGCAACTGCCGGCGATCGGGCTG CCGCTCGCCGTGGCCGTGTTCGCGATCTGGCCGCTCGCCGCGTACATCGCGTTTCCCGACGACGCGAACTGGTTCTTCAA CCAATGGCTGCACGGCAGCCTGATGCGCTTCTCCGGCCCGCCCACGACGGTGCTCGCGTACGCGGCGAAGAACCTGCCGC TCTTCACGTGGCCCGCGTGGCCGCTCGCGATCTGGGCATGGGTGAGCTGGGCGGGGCTGCGCCGCCGGCCGCACATCGCG ATTCCGCTGTCGGTCGCCGCGCCGCTCCTCGCGCTCGTGATCCTGCAGAGCCAGCAGACGAACCGGATGTACATGCTGCT GCTGCCCGCCCTCGCCGTCATCGCGACGTTCGCGCTGCCGACGCTCAAGCGCGGCGCGATCAACGCGATCGACTGGTTCG CGGTGCTGAGCTTCACGATCCTCGGCACGTTCGTGTGGCTCGTGTGGCTCGCGTCGCTCACGGGCTTCCCGCATCCGCTC GCGCGCAACCTCGGCCGCCTGGTGCCGGGCTACGAGCCGCACTTCAAGGTGCTGTCGTTCGTGTGCGCGGTCGCCGCGAC CGCATGCTGGCTGATGCTCGTGCGCTGGCGCATCTCGCGGCAGCCGAAGGTGCTCTGGCGCAGCGTGGTGCTGTCGAGCG CCGGCACGACGCTGATGTGGGTGCTGCTGATGACGCTGTGGCTGCCGATCGTCAATTACAGCCGGACCTATCGCGACGTC GCGCAGCAGATCGCCGCGCACCTGCCGTCCGATTACGAATGCATCTCGCCCGTGCGGCTCGGCGACGCGCAGATCGCGAC GTTCGCGTATTTCGGCGACATGCACTTCTCGTTCACCGATGACTGCGACGTGATCCTGCGCCAGGATCGCGCGGACTTCG GCGAGCCGAGTTCGATCTCGCAATACGTGTGGCGCCTCGTGTGGGAAGGCCGCCGCGTCGCCGACCGCGACGAGCGCTTC CGCCTGTACGAGCGAATCGAGCGCCCGAAGACGCCCGTCAAGCGCCGCCCGCCGCGCAAGGCCCGCTGA
Upstream 100 bases:
>100_bases TCGCTGACGCGTGCCGGCCGGCGCGTCTACAATGCCGGATGCCCGAAACCGCCCGCCGCTCGCGCGCCGGCATGTCGTCC ATCCTCTTGCCCCCATCTGC
Downstream 100 bases:
>100_bases CCGATGTTCGGCGACATCCGCCGGATCGCCGGTCTCGCCTGGCCGGTGCTCGTCGGCCAGCTCGCGATCATCGCGTTCGG CGTGATCGATACCGCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Inner Membrane Protein; Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyl Transferase Family; PMT Family Glycosyltransferase; Glycosyltransferase Pmt Family
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLHDWLLPNLVGKFVTSDGPLGYWL GGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLA ERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNPVLVAALALGTLALYLVTPEIRCVQLPAIGL PLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKNLPLFTWPAWPLAIWAWVSWAGLRRRPHIA IPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFPHPL ARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTLMWVLLMTLWLPIVNYSRTYRDV AQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSSISQYVWRLVWEGRRVADRDERF RLYERIERPKTPVKRRPPRKAR
Sequences:
>Translated_582_residues MKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLHDWLLPNLVGKFVTSDGPLGYWL GGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLA ERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNPVLVAALALGTLALYLVTPEIRCVQLPAIGL PLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKNLPLFTWPAWPLAIWAWVSWAGLRRRPHIA IPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFPHPL ARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTLMWVLLMTLWLPIVNYSRTYRDV AQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSSISQYVWRLVWEGRRVADRDERF RLYERIERPKTPVKRRPPRKAR >Mature_582_residues MKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLHDWLLPNLVGKFVTSDGPLGYWL GGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLA ERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNPVLVAALALGTLALYLVTPEIRCVQLPAIGL PLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKNLPLFTWPAWPLAIWAWVSWAGLRRRPHIA IPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFPHPL ARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTLMWVLLMTLWLPIVNYSRTYRDV AQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSSISQYVWRLVWEGRRVADRDERF RLYERIERPKTPVKRRPPRKAR
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64977; Mature: 64977
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLHDW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHCCCCHHH LLPNLVGKFVTSDGPLGYWLGGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLG HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC RRAEIQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLAERGHETTPQLAQFACIATFV CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH YGLVRAIDKPTQGALWWGLALGLVALSGNPVLVAALALGTLALYLVTPEIRCVQLPAIGL HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCH PLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKNLPLFTWPAW HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCEEECCHH PLAIWAWVSWAGLRRRPHIAIPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALP HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH TLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFPHPLARNLGRLVPGYEPHFKVLSF HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH VCAVAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTLMWVLLMTLWLPIVNYSRTYRDV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSSIS HHHHHHHCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHH QYVWRLVWEGRRVADRDERFRLYERIERPKTPVKRRPPRKAR HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLHDW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHCCCCHHH LLPNLVGKFVTSDGPLGYWLGGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLG HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC RRAEIQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLAERGHETTPQLAQFACIATFV CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH YGLVRAIDKPTQGALWWGLALGLVALSGNPVLVAALALGTLALYLVTPEIRCVQLPAIGL HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCH PLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKNLPLFTWPAW HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCEEECCHH PLAIWAWVSWAGLRRRPHIAIPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALP HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH TLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFPHPLARNLGRLVPGYEPHFKVLSF HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH VCAVAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTLMWVLLMTLWLPIVNYSRTYRDV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSSIS HHHHHHHCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHH QYVWRLVWEGRRVADRDERFRLYERIERPKTPVKRRPPRKAR HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA