| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454448
Identifier: 126454448
GI number: 126454448
Start: 3758998
End: 3760248
Strand: Direct
Name: 126454448
Synonym: BURPS1106A_3857
Alternate gene names: NA
Gene position: 3758998-3760248 (Clockwise)
Preceding gene: 126453585
Following gene: 126452380
Centisome position: 94.25
GC content: 67.31
Gene sequence:
>1251_bases ATGAAGCAGCGGAATCTGATCCTGGCGATGGCTTGCGCCGCGCCCTTTATCTCGGCGTGCAGCGGCGGCGGCGGCGGCAG CGAATCGCAGCCGCTCGTCGAGGCGGCGCTCTGCCCTTCGTCGGTCGACTACAACACCGTCTACACGGGCGGCGGCGGCG ACGGCGAACTGGTCAAGCTGCAGATCGACACGACGAAGATGACCTGGCAAATCACCTTCGTCGAATCACCGGTTCCGAAG ACGACGGGCACCGCGGCGCCGACGCGCGCGGGCACGACGCAAAGCGGCACGCTCACGCAGGAAACGCTGCTGCCGACGCA GAAGCTCAACAACTGCGCATTCCGCCTGAACGGCGCGAGCCTCGATCCGAACCGGCCGGCGCGCATCTTCCTCGGCATGG GCATCGTGGGCGGCACGATCCCGGGCGCGGAAATCCAGTATGGCGGCCTGCTCGGCCAGGGCGCGATTCCCGACACGACG TTCCCGTACTACCCGTTCATCGCGTTCTCGTCGCTCGAGACCGACGTCACGAAGCTCGCCGGCACGTACAGCCAGCTCGG CTACGGCCAGGTGGGTTCGCAGAACTTCGCGCCGACGACGATCGACGCGAAGGTGACGATCAACCCCGACGGCACGTGGG TCCGCTGCGACACGACGGGCATTTACGCGGGCACCTGCCGGCAGCCGGGCACGAACATCGTGCAATCGGCGGACGGCACG GGCGCGTTCGAGACCGATCACTATCAGGGCCAGGTGAAGCCGACGCTCGCGACCATCCCGCAGGCGAAGGGCTACATCAT CGTCGGCAAGCTGCGCAACCAGCTCGTGCCGATCATGATCCGCACGGGCGTCGCGAACCCGAACCCGACGCCCGACGCGA ACGGTGTGCCGGGGCTCACCGCCGACGACGAATCCGGCATCTCGATCCTCGCGCCGCAGACGGCGATTGCGGTCGGCTCG CAAAACGGCGAGTACATCGGCGTGGACAGCCAGTTCGATTACCGGACGACCGCGCTCGTCAACGCGCAGGCGACGCTGCT CGATCCGTTCCAGGCGTCGCAGGCGTCGCTCGCGACGCCGCTGAACCTCGACTACACGCAAGCGGTGCCGGGCACGGTCA CGTCGACCCACGTCGGCGCGAGCAGCACGACGCCGACCGGCAAGTTCATCTTCACGGGCGGGGTGTTCGGCTTCCTCGAC ATGTCCAACTCGTCGTCGCCGTACTTCACGGTCGGCGCCTTCGTGCAGTAA
Upstream 100 bases:
>100_bases ACACGCGTCGCGCCGGGCCGCGCCGCAGCAGGCGACATCGAGAGCGGCCCAAGGGAGCCGGCCGCCGGATAAAGACAATT TCGGAGTTTGGAGGAGCAAC
Downstream 100 bases:
>100_bases CCGACGCTCGGGAGGCCTTATGAGAAAAGCACTCTGCACGGCGCTCGGCGTCGCGGCGCTGACGCCGCTCGCCGCGCACG CGCAAAGCGCGGGCAGCAAC
Product: putative lipoprotein
Products: NA
Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKQRNLILAMACAAPFISACSGGGGGSESQPLVEAALCPSSVDYNTVYTGGGGDGELVKLQIDTTKMTWQITFVESPVPK TTGTAAPTRAGTTQSGTLTQETLLPTQKLNNCAFRLNGASLDPNRPARIFLGMGIVGGTIPGAEIQYGGLLGQGAIPDTT FPYYPFIAFSSLETDVTKLAGTYSQLGYGQVGSQNFAPTTIDAKVTINPDGTWVRCDTTGIYAGTCRQPGTNIVQSADGT GAFETDHYQGQVKPTLATIPQAKGYIIVGKLRNQLVPIMIRTGVANPNPTPDANGVPGLTADDESGISILAPQTAIAVGS QNGEYIGVDSQFDYRTTALVNAQATLLDPFQASQASLATPLNLDYTQAVPGTVTSTHVGASSTTPTGKFIFTGGVFGFLD MSNSSSPYFTVGAFVQ
Sequences:
>Translated_416_residues MKQRNLILAMACAAPFISACSGGGGGSESQPLVEAALCPSSVDYNTVYTGGGGDGELVKLQIDTTKMTWQITFVESPVPK TTGTAAPTRAGTTQSGTLTQETLLPTQKLNNCAFRLNGASLDPNRPARIFLGMGIVGGTIPGAEIQYGGLLGQGAIPDTT FPYYPFIAFSSLETDVTKLAGTYSQLGYGQVGSQNFAPTTIDAKVTINPDGTWVRCDTTGIYAGTCRQPGTNIVQSADGT GAFETDHYQGQVKPTLATIPQAKGYIIVGKLRNQLVPIMIRTGVANPNPTPDANGVPGLTADDESGISILAPQTAIAVGS QNGEYIGVDSQFDYRTTALVNAQATLLDPFQASQASLATPLNLDYTQAVPGTVTSTHVGASSTTPTGKFIFTGGVFGFLD MSNSSSPYFTVGAFVQ >Mature_416_residues MKQRNLILAMACAAPFISACSGGGGGSESQPLVEAALCPSSVDYNTVYTGGGGDGELVKLQIDTTKMTWQITFVESPVPK TTGTAAPTRAGTTQSGTLTQETLLPTQKLNNCAFRLNGASLDPNRPARIFLGMGIVGGTIPGAEIQYGGLLGQGAIPDTT FPYYPFIAFSSLETDVTKLAGTYSQLGYGQVGSQNFAPTTIDAKVTINPDGTWVRCDTTGIYAGTCRQPGTNIVQSADGT GAFETDHYQGQVKPTLATIPQAKGYIIVGKLRNQLVPIMIRTGVANPNPTPDANGVPGLTADDESGISILAPQTAIAVGS QNGEYIGVDSQFDYRTTALVNAQATLLDPFQASQASLATPLNLDYTQAVPGTVTSTHVGASSTTPTGKFIFTGGVFGFLD MSNSSSPYFTVGAFVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43215; Mature: 43215
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRNLILAMACAAPFISACSGGGGGSESQPLVEAALCPSSVDYNTVYTGGGGDGELVKL CCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCEEEE QIDTTKMTWQITFVESPVPKTTGTAAPTRAGTTQSGTLTQETLLPTQKLNNCAFRLNGAS EEECEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCHHHCCCEEEEEECCC LDPNRPARIFLGMGIVGGTIPGAEIQYGGLLGQGAIPDTTFPYYPFIAFSSLETDVTKLA CCCCCCEEEEEEECEECCCCCCCEEEECCEECCCCCCCCCCCCCCEEEECCCHHHHHHHH GTYSQLGYGQVGSQNFAPTTIDAKVTINPDGTWVRCDTTGIYAGTCRQPGTNIVQSADGT HHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCEEEECCCCCCCCHHEECCCCC GAFETDHYQGQVKPTLATIPQAKGYIIVGKLRNQLVPIMIRTGVANPNPTPDANGVPGLT CCEECCCCCCEECCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCC ADDESGISILAPQTAIAVGSQNGEYIGVDSQFDYRTTALVNAQATLLDPFQASQASLATP CCCCCCEEEECCCEEEEEECCCCCEEEECCCCCCEEEEEEECCEEEECCCCCCCHHCCCC LNLDYTQAVPGTVTSTHVGASSTTPTGKFIFTGGVFGFLDMSNSSSPYFTVGAFVQ CCCCHHCCCCCCCEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MKQRNLILAMACAAPFISACSGGGGGSESQPLVEAALCPSSVDYNTVYTGGGGDGELVKL CCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCEEEE QIDTTKMTWQITFVESPVPKTTGTAAPTRAGTTQSGTLTQETLLPTQKLNNCAFRLNGAS EEECEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCHHHCCCEEEEEECCC LDPNRPARIFLGMGIVGGTIPGAEIQYGGLLGQGAIPDTTFPYYPFIAFSSLETDVTKLA CCCCCCEEEEEEECEECCCCCCCEEEECCEECCCCCCCCCCCCCCEEEECCCHHHHHHHH GTYSQLGYGQVGSQNFAPTTIDAKVTINPDGTWVRCDTTGIYAGTCRQPGTNIVQSADGT HHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCEEEECCCCCCCCHHEECCCCC GAFETDHYQGQVKPTLATIPQAKGYIIVGKLRNQLVPIMIRTGVANPNPTPDANGVPGLT CCEECCCCCCEECCCEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCC ADDESGISILAPQTAIAVGSQNGEYIGVDSQFDYRTTALVNAQATLLDPFQASQASLATP CCCCCCEEEECCCEEEEEECCCCCEEEECCCCCCEEEEEEECCEEEECCCCCCCHHCCCC LNLDYTQAVPGTVTSTHVGASSTTPTGKFIFTGGVFGFLDMSNSSSPYFTVGAFVQ CCCCHHCCCCCCCEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA