| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is pabB [H]
Identifier: 126454445
GI number: 126454445
Start: 3225453
End: 3227462
Strand: Reverse
Name: pabB [H]
Synonym: BURPS1106A_3308
Alternate gene names: 126454445
Gene position: 3227462-3225453 (Counterclockwise)
Preceding gene: 126452366
Following gene: 126453743
Centisome position: 80.92
GC content: 72.49
Gene sequence:
>2010_bases ATGACTGACGAAGCGGGCGCGGTTTTCGCGCTCTTCGACGATTGCGACTCGACCGCGGCGGCGCGCTCGAGTCGTTTGTA TTCGGGCTTCTCGCACGAGCGGGCCTGCGCCGATCCGGCCGGCCTCGACGCGGTGTGCGCGGCCGTCGCCGACGACGCGC GGCGCGGGCTGCACGCCGTCGTGCTCGGCGACTACGAGTTCGGGCGCGACCTGCAGCTCGGCAAGCGCGGCGGCGGCGCG TTGCGGTTCCTGCTGTTCGCCGAATGCAGGATGCTCTCGCGCGAGGAGGCCGACGCGTGGCTCGCGTCGCGCGACGGCGG CTCGGCCGAGCCGTCGGCGGCGGGCGTCGCGCACGTGACGAAGAGCGTCGCGCGCGACGCGTTCGACGCGGCGATCGCCG CCGTGCACGATGCGCTGCGCGCGGGCGATTCGTATCAGATCAACTACACGTACCGGCTGCATTTCGATGCGTTCGGCGCG CCGCTCGCGCTGTATCGCCGCCTGCGGGCGCGCCAGCCGGTGCGCTACGGCGCGCTCGTCGCGCTGCCGGGCGGCGCGTG GATCGTGTCGTGCTCGCCCGAGCTGTTCGTCGAGAAGACGGGCGCGTTGCTGCGCGCGCGGCCGATGAAAGGCACCGCGC CTCGCTCGGACGATCCGCGCGAGGATGCGGCCGCCGCGCGCTTTCTCGCGAACGATGCGAAGAATCGCGCCGAGAACGTG ATGATCGTCGATCTGCTGCGCAACGATCTCGCGCGCATCGCGCGCACCGGATCGGTGACGGTGCCGGCGTTGTTCTCGGT CGAGCCGTATGCGTCGGTGTGGCAGATGACGTCGACGGTCGAGGCGGGCATCGTCGAAGGCGCGACGTTCGCCGACGTGC TGCGCGCGCTCTTTCCGTGCGGCTCGATCACGGGCGCGCCGAAGCACAGGACGATGCAACTGATCGATGCGCTCGAGACG ACGCCGCGCGGGCTCTATACGGGCGCGATCGGCTGGCTCGATGCGGAGGAGGCGCGTGCGGACGGCGCCGAGCCTGCCGC CGGCGCGTTCGCGCCGGCGCGTGCGGCGAGCCCGGCCGCAGGCACGGCGTCGGATGGTGCGTGCGCGGGCGAAATCGCGT CGAAGCAGGCGTCGAAGCGTGCCGGCGCGACAAGCCCGGCCGGCGCGTGCGGCGATTTCTGCCTGTCGGTCGCGATCCGC ACGCTGACGCTCGACGCGCCGTCGGCCGGCGGCGAGCGGCGCGGCACGATGGGCGTCGGCGCGGGCATCGTGCTCGACAG CGTTGCCGCCGACGAATACGCGGAGTGCGAATTGAAGGCGCGTTTCCTGACCGACGCCGAGCCCGGCTTCCAGTTGTTCG AGACGATGCTCGCCACGCGTGACGCCGGCGTGCGCCATCTCGACCGCCATGTCGCGCGGCTGCGCGCGAGTGCCGACGCG CTCGGCTTCGCGTTCGACGAAGCGGCGGCCAGGCAGCGCATCGGCGCGCGCTGCGTGCAGCTCGGCGACGGCGAGCATCG CTTGCGCGTCGCGCTCGCGAAGGACGGCGTGCTCGACATCGTGGCCGCGCCGCTCGCGCCGCTCGCGGGCGCCGCGGTGG CCGTGTTGCTCGCGCCCGAGCACGGGTTCGCGCCGATGCGCTCGGGCGACTTCCTGCTCGCGCACAAGACGACGCGCCGC GCCGATTACGATCGCGCGTGGAAAGCCGCGCAGGCGTGCGGTGCGTTCGACATGCTGTTCTTCAACGAACGCGGCGAATT GACCGAAGGCGGGCGCACGAGCGTATTCGTGAAGCTGGCCGGGCGCTGGTTCACGCCGCCGCTGTCGTCGGGCGTGTTGC CGGGCGTGATGCGCGGCGCGCTGCTCGACGATCCGGCATGGCAGGCGTCCGAGCGTGTAATGACGCTGGACGACGTGCTG CGCGCCGACGCGCTGATGCTGACGAACGCATTGCGCGGCGCGATGCCCGCGCAACTCGTGCGGGCCGCCGGCGCGGCGGC ACCGCGATAG
Upstream 100 bases:
>100_bases AGGCGGCCCGCGTCACAGCCCGCAGAGCAAGAGCTGGTTCGACCGCGTGAAGAGCTTCTTCGAGTGACGCCCGGCGTGCG GCCCGCAGGTGAGAGGCAGG
Downstream 100 bases:
>100_bases GCGCGCGAAGAGCGGCCGGGCGGCCGGGCGGTCGCACGCATCGCCCTCGCGCTTCGGCTCGCAAAAAGCGGCATCCCGCA CGTGCGGGATGCCGCTTTTT
Product: para-aminobenzoate synthase, component I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 669; Mature: 668
Protein sequence:
>669_residues MTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAVVLGDYEFGRDLQLGKRGGGA LRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGA PLALYRRLRARQPVRYGALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNRAENV MIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPCGSITGAPKHRTMQLIDALET TPRGLYTGAIGWLDAEEARADGAEPAAGAFAPARAASPAAGTASDGACAGEIASKQASKRAGATSPAGACGDFCLSVAIR TLTLDAPSAGGERRGTMGVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRASADA LGFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEHGFAPMRSGDFLLAHKTTRR ADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVL RADALMLTNALRGAMPAQLVRAAGAAAPR
Sequences:
>Translated_669_residues MTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAVVLGDYEFGRDLQLGKRGGGA LRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGA PLALYRRLRARQPVRYGALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNRAENV MIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPCGSITGAPKHRTMQLIDALET TPRGLYTGAIGWLDAEEARADGAEPAAGAFAPARAASPAAGTASDGACAGEIASKQASKRAGATSPAGACGDFCLSVAIR TLTLDAPSAGGERRGTMGVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRASADA LGFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEHGFAPMRSGDFLLAHKTTRR ADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVL RADALMLTNALRGAMPAQLVRAAGAAAPR >Mature_668_residues TDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAVVLGDYEFGRDLQLGKRGGGAL RFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVTKSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGAP LALYRRLRARQPVRYGALVALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNRAENVM IVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPCGSITGAPKHRTMQLIDALETT PRGLYTGAIGWLDAEEARADGAEPAAGAFAPARAASPAAGTASDGACAGEIASKQASKRAGATSPAGACGDFCLSVAIRT LTLDAPSAGGERRGTMGVGAGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRASADAL GFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPEHGFAPMRSGDFLLAHKTTRRA DYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLAGRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVLR ADALMLTNALRGAMPAQLVRAAGAAAPR
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=246, Percent_Identity=40.650406504065, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1787518, Length=219, Percent_Identity=31.9634703196347, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1786809, Length=173, Percent_Identity=27.7456647398844, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=213, Percent_Identity=31.924882629108, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6324361, Length=232, Percent_Identity=30.1724137931034, Blast_Score=94, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 70335; Mature: 70204
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAV CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE VLGDYEFGRDLQLGKRGGGALRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVT EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH KSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGAPLALYRRLRARQPVRYGALV HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEE ALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNRAENV EECCCCEEEECCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE MIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPC EEHHHHHHHHHHHHHCCCEEECEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC GSITGAPKHRTMQLIDALETTPRGLYTGAIGWLDAEEARADGAEPAAGAFAPARAASPAA CCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC GTASDGACAGEIASKQASKRAGATSPAGACGDFCLSVAIRTLTLDAPSAGGERRGTMGVG CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCC AGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRASADA CHHHHHHHHCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPE HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEEECCC HGFAPMRSGDFLLAHKTTRRADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLA CCCCCCCCCCEEEEECCHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEC GRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVLRADALMLTNALRGAMPAQLV CCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCEECHHHHHHHHHHHHHHHHHCCHHHHHH RAAGAAAPR HHHCCCCCC >Mature Secondary Structure TDEAGAVFALFDDCDSTAAARSSRLYSGFSHERACADPAGLDAVCAAVADDARRGLHAV CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE VLGDYEFGRDLQLGKRGGGALRFLLFAECRMLSREEADAWLASRDGGSAEPSAAGVAHVT EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH KSVARDAFDAAIAAVHDALRAGDSYQINYTYRLHFDAFGAPLALYRRLRARQPVRYGALV HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEE ALPGGAWIVSCSPELFVEKTGALLRARPMKGTAPRSDDPREDAAAARFLANDAKNRAENV EECCCCEEEECCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE MIVDLLRNDLARIARTGSVTVPALFSVEPYASVWQMTSTVEAGIVEGATFADVLRALFPC EEHHHHHHHHHHHHHCCCEEECEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC GSITGAPKHRTMQLIDALETTPRGLYTGAIGWLDAEEARADGAEPAAGAFAPARAASPAA CCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC GTASDGACAGEIASKQASKRAGATSPAGACGDFCLSVAIRTLTLDAPSAGGERRGTMGVG CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCC AGIVLDSVAADEYAECELKARFLTDAEPGFQLFETMLATRDAGVRHLDRHVARLRASADA CHHHHHHHHCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGFAFDEAAARQRIGARCVQLGDGEHRLRVALAKDGVLDIVAAPLAPLAGAAVAVLLAPE HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEEEEECCC HGFAPMRSGDFLLAHKTTRRADYDRAWKAAQACGAFDMLFFNERGELTEGGRTSVFVKLA CCCCCCCCCCEEEEECCHHCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEC GRWFTPPLSSGVLPGVMRGALLDDPAWQASERVMTLDDVLRADALMLTNALRGAMPAQLV CCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCEECHHHHHHHHHHHHHHHHHCCHHHHHH RAAGAAAPR HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6330050; 9097040; 9278503; 7896119; 2251281; 7592344 [H]