| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is fahA
Identifier: 126454358
GI number: 126454358
Start: 3129481
End: 3130788
Strand: Reverse
Name: fahA
Synonym: BURPS1106A_3212
Alternate gene names: NA
Gene position: 3130788-3129481 (Counterclockwise)
Preceding gene: 126453053
Following gene: 126454712
Centisome position: 78.5
GC content: 70.34
Gene sequence:
>1308_bases ATGAGCGCTATTCCCGACACGCTGCGCGCGAGCCTCGATCCGTCCCGCAAGAGCTGGCTCGATACGGCGAACGCGGCCGC GTGCGACTTCCCGATCCAGAACCTGCCGTTCGGCGTCTTCAGCGACGCGCGCGACGCGTCGCGCCGCGCGGGCGTCGCGC TTGGCGATCAGATCATCGATCTCGCCGCGCTCGCGCGCGCGGGGCTGCTGACGGTCGACGGCGGGGCGGCCGTGTTCGCG CGGCCGGCGCTCAACGATTTCATCTCGCTCGGCCGCGACGCATGGCGCAGCGTGCGCGTCCAGCTGAGCGCGCTTTTCGA GCGCGGCGACGCGCGGCTGCGCGACGACGCGGCGTTGCGCGCGAAGGTGCTCGTCGCGCAGCGCGACGCGGCGCTTCATC TGCCCGTCGACATTCCCGGCTATACCGATTTCTATTCGTCGAAGGAGCACGCGACGAACGTCGGCTCGATGTTTCGCGAT CCGAAGAACGCGCTGCTGCCGAACTGGTCGGAGATGCCGATCGGCTACAACGGCCGCGCGTCGTCGGTCGTCGTGAGCGG CACGCCGGTGCGCCGGCCGAACGGCCAGCTGAAGCTGCCCGACAGCGAGCGCCCGGTGTTCGGCGCGTGCCGCAAGCTCG ACATCGAGCTCGAGACGGGCTTCATCGTCGGCCGCGGCAACGCGCTCGGCGAGCCGATCGCGTGCGAGGATGCGGAGTCG CACATCTTCGGGATGGTGCTGCTCAACGACTGGAGCGCGCGCGACATCCAGCAATGGGAATACGTGCCGCTCGGGCCGTT CAACGCGAAGACGTTCGCGACGTCGATCTCGCCGTGGATCGTCACGCTCGATGCGCTCGAGCCGTTTCGCACCGCGCAGC CGAGGCAGGAGCCAGAGCCGCTCGCGTATCTGCGCCACGGCGGCGCGCATGCGTTCGACATCGAGCTCGAAGTGCGGCTG AGGCCGGAGGGCGCCGCCGACGCGACGACGATCGCGCGCACGAACTTCAGGCACATGTACTGGACGATGGCGCAGCAGCT CGCGCACCACACGGTGTCGGGCTGCAACACGCGGGTCGGCGACCTGATGGGCTCGGGCACGATCAGCGGGCCGGCGAAGC AGGCGTTCGGCAGCCTGCTCGAGCTGACGTGGAACGGCAAGGAGCCCGTCTCGCTCGCGGGCGGCGGCACGCGCGCGTTC ATCGAGGACGGCGACGAGCTGACGCTGGCGGGCTGGTGCCAGGGCGACGGGTATCGCGTCGGCTTCGGCACGTGCGTCGG GGAGATTCTGCCGGCGCGGGGCCGGTGA
Upstream 100 bases:
>100_bases TGATCCGGCCGACGCGTTTCGCGCTCGACACCGCGCAACTGCAGGCGAACTACTTCGAATGCTGGCAAGGCCTCAAGAAA CACTTCAATCCGGAGCAACG
Downstream 100 bases:
>100_bases CGCGCTAGCGCGCGAAGCGGGCCGCGCGCCTGGCGCGGCTCGAGCGCGCGAACGGGACGCACGGTTATCGGATCGGGCGC TTGCGGCCGCGAGGTTGCAA
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSAIPDTLRASLDPSRKSWLDTANAAACDFPIQNLPFGVFSDARDASRRAGVALGDQIIDLAALARAGLLTVDGGAAVFA RPALNDFISLGRDAWRSVRVQLSALFERGDARLRDDAALRAKVLVAQRDAALHLPVDIPGYTDFYSSKEHATNVGSMFRD PKNALLPNWSEMPIGYNGRASSVVVSGTPVRRPNGQLKLPDSERPVFGACRKLDIELETGFIVGRGNALGEPIACEDAES HIFGMVLLNDWSARDIQQWEYVPLGPFNAKTFATSISPWIVTLDALEPFRTAQPRQEPEPLAYLRHGGAHAFDIELEVRL RPEGAADATTIARTNFRHMYWTMAQQLAHHTVSGCNTRVGDLMGSGTISGPAKQAFGSLLELTWNGKEPVSLAGGGTRAF IEDGDELTLAGWCQGDGYRVGFGTCVGEILPARGR
Sequences:
>Translated_435_residues MSAIPDTLRASLDPSRKSWLDTANAAACDFPIQNLPFGVFSDARDASRRAGVALGDQIIDLAALARAGLLTVDGGAAVFA RPALNDFISLGRDAWRSVRVQLSALFERGDARLRDDAALRAKVLVAQRDAALHLPVDIPGYTDFYSSKEHATNVGSMFRD PKNALLPNWSEMPIGYNGRASSVVVSGTPVRRPNGQLKLPDSERPVFGACRKLDIELETGFIVGRGNALGEPIACEDAES HIFGMVLLNDWSARDIQQWEYVPLGPFNAKTFATSISPWIVTLDALEPFRTAQPRQEPEPLAYLRHGGAHAFDIELEVRL RPEGAADATTIARTNFRHMYWTMAQQLAHHTVSGCNTRVGDLMGSGTISGPAKQAFGSLLELTWNGKEPVSLAGGGTRAF IEDGDELTLAGWCQGDGYRVGFGTCVGEILPARGR >Mature_434_residues SAIPDTLRASLDPSRKSWLDTANAAACDFPIQNLPFGVFSDARDASRRAGVALGDQIIDLAALARAGLLTVDGGAAVFAR PALNDFISLGRDAWRSVRVQLSALFERGDARLRDDAALRAKVLVAQRDAALHLPVDIPGYTDFYSSKEHATNVGSMFRDP KNALLPNWSEMPIGYNGRASSVVVSGTPVRRPNGQLKLPDSERPVFGACRKLDIELETGFIVGRGNALGEPIACEDAESH IFGMVLLNDWSARDIQQWEYVPLGPFNAKTFATSISPWIVTLDALEPFRTAQPRQEPEPLAYLRHGGAHAFDIELEVRLR PEGAADATTIARTNFRHMYWTMAQQLAHHTVSGCNTRVGDLMGSGTISGPAKQAFGSLLELTWNGKEPVSLAGGGTRAFI EDGDELTLAGWCQGDGYRVGFGTCVGEILPARGR
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=411, Percent_Identity=57.6642335766423, Blast_Score=510, Evalue=1e-144, Organism=Caenorhabditis elegans, GI17568863, Length=410, Percent_Identity=54.6341463414634, Blast_Score=459, Evalue=1e-129, Organism=Drosophila melanogaster, GI24657182, Length=407, Percent_Identity=52.0884520884521, Blast_Score=432, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 47057; Mature: 46925
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIPDTLRASLDPSRKSWLDTANAAACDFPIQNLPFGVFSDARDASRRAGVALGDQIID CCCCCCHHHHCCCCCHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCHHHHHHHH LAALARAGLLTVDGGAAVFARPALNDFISLGRDAWRSVRVQLSALFERGDARLRDDAALR HHHHHHCCEEEECCCCEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH AKVLVAQRDAALHLPVDIPGYTDFYSSKEHATNVGSMFRDPKNALLPNWSEMPIGYNGRA EEEEEEECCCEEEEEEECCCCCHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC SSVVVSGTPVRRPNGQLKLPDSERPVFGACRKLDIELETGFIVGRGNALGEPIACEDAES CEEEEECCCCCCCCCCEECCCCCCCHHHCCEEEEEEEECCEEEECCCCCCCCCCCCCCCC HIFGMVLLNDWSARDIQQWEYVPLGPFNAKTFATSISPWIVTLDALEPFRTAQPRQEPEP CEEEEEEECCCCCCCCCCCCEEECCCCCCHHHEECCCCEEEEEECCCCHHCCCCCCCCCH LAYLRHGGAHAFDIELEVRLRPEGAADATTIARTNFRHMYWTMAQQLAHHTVSGCNTRVG HHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH DLMGSGTISGPAKQAFGSLLELTWNGKEPVSLAGGGTRAFIEDGDELTLAGWCQGDGYRV HHHCCCCCCCHHHHHHHHHEEEEECCCCCEEECCCCEEEEEECCCEEEEEEEECCCCEEE GFGTCVGEILPARGR EHHHHHHHHCCCCCC >Mature Secondary Structure SAIPDTLRASLDPSRKSWLDTANAAACDFPIQNLPFGVFSDARDASRRAGVALGDQIID CCCCCHHHHCCCCCHHHHHCCCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCHHHHHHHH LAALARAGLLTVDGGAAVFARPALNDFISLGRDAWRSVRVQLSALFERGDARLRDDAALR HHHHHHCCEEEECCCCEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHH AKVLVAQRDAALHLPVDIPGYTDFYSSKEHATNVGSMFRDPKNALLPNWSEMPIGYNGRA EEEEEEECCCEEEEEEECCCCCHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC SSVVVSGTPVRRPNGQLKLPDSERPVFGACRKLDIELETGFIVGRGNALGEPIACEDAES CEEEEECCCCCCCCCCEECCCCCCCHHHCCEEEEEEEECCEEEECCCCCCCCCCCCCCCC HIFGMVLLNDWSARDIQQWEYVPLGPFNAKTFATSISPWIVTLDALEPFRTAQPRQEPEP CEEEEEEECCCCCCCCCCCCEEECCCCCCHHHEECCCCEEEEEECCCCHHCCCCCCCCCH LAYLRHGGAHAFDIELEVRLRPEGAADATTIARTNFRHMYWTMAQQLAHHTVSGCNTRVG HHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH DLMGSGTISGPAKQAFGSLLELTWNGKEPVSLAGGGTRAFIEDGDELTLAGWCQGDGYRV HHHCCCCCCCHHHHHHHHHEEEEECCCCCEEECCCCEEEEEECCCEEEEEEEECCCCEEE GFGTCVGEILPARGR EHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA