Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is yjjL [C]

Identifier: 126454349

GI number: 126454349

Start: 1455940

End: 1457232

Strand: Direct

Name: yjjL [C]

Synonym: BURPS1106A_1500

Alternate gene names: 126454349

Gene position: 1455940-1457232 (Clockwise)

Preceding gene: 126451560

Following gene: 126451782

Centisome position: 36.5

GC content: 70.07

Gene sequence:

>1293_bases
GTGACGGCGTTTTCGTTTGCGCGCGCCGCCGGTTCGTCGGTCGGCGTCTTACCGGTGATCGTGATGTCCCTCATGCAATT
TCGCGTGTTCGCGCTGTTCGCGATCGGCTATTTCGTTTCGTACGTCTTTCGCGGCGTGAATCTCGGCTTCGCGCCGCTCA
TCACGCGCGAGCTCGGCCTGTCCGCCGCCGATCTCGGGCTGCTGACGAGCCTTTACTTTCTTGGTTTCGCGTGCGCGCAG
ATTCCGGCCGGCGTGCTGCTCGACCGCTACGGCCCGCGTCGCGTGAGCGCCGCGCTTCTGCTCGTCGCGGCGGCGGGCGC
GTGGGTGTTCGGCGCCGCGCACGACATCGGCGCGATGATGCTCGGGCGTCTTCTGATCGGCGTCGGCGTGTCGGTGTGCC
TGGGCGGCGCGTTCAAGGCGCTCGCGCAGCATTTCCCGGTCGCGAGGCTGCCGCTTCTGAACGGCTTCGTGATGGCGGTG
GGCGGGCTGGGCGGCGTCGCGGTCGGCTCGCCGCTCGATTGGCTGCTTGGCTTCGCCGGCTGGCGCGCGGTGTGCGCGGG
GCTCGGCGCGTTCACGGTGGCGGTCGCGGCCGCGTTGTGGGCGTTCGCCCCCGATGCGCGGCAGAGCCGTCACGACGCGA
GCGTCGCCGCGCAATTCGCGGGCACCTGGCGAATCGTCACGAACCGCACGTTCTGGAAGATCGCGTCGTTTTCGGTCGTC
ACGCAGGGCGTGTTCTACGCGATGCAATCGCTGTGGGTCGGCGCGTATCTGCGCGACGTGAGCGGCTTCGCGCCGCGCGA
CGCGGCCGTGCTCGTGTCCGTGCTCGGCTTCGCGATGATGGCGGGCTGCGTCGGCTTCGGCGCGGCGGCGCGCGGGCTCG
AGCGGCGCGGCATGTCGCTGTATGCGTTCTGCGGGTTCGGGATGGCGCTCTTCGTCGCGACCCAGCTCGCGATCATGCTG
CGCGCGCCGCTGCCCGCCGCGGTGCTGTGGGCGGCGTACGGCGTGTTCGGCGGCGTCGGCATCCTGAGCTACGCCGTGCT
CGCCGAATATTTCCCCGTGCACGTGATCGGCCGTGCGAACACGACGCTCACGCTCGTCATCTTCGTGCTGATCTTCGGAT
TCCAGGTGGGCGTGGGCGCGGTGCTGTCGCATTGGCCGATGCGGGCCGGGCATTATCCGGCCGAGGCGCATTTGAGCGCG
TGGGGCGCGCTCGTCGCGCTGCAGATCGCGAGCGCGGTCTGGTACGTGCTGCCCGATCGCGCGCTCGACAAGTCCGCCCG
GCACGCGGGGTGA

Upstream 100 bases:

>100_bases
GCGACGAAGAAGAAGTAAGACGAAAGGGCGCGCATGCCGCGGGGGCTTTCCTGCCGGCGACGCGCGATCGAGACTATCAT
CGCCGGACGCCGTCACCTGG

Downstream 100 bases:

>100_bases
TTCGCGTCACGCCCGTCGCGGCGGCGCGCGGGCGTCGGCCGGCCGCGCGCCGCGATCGCCGGCGTGGCGCGGCGACGGGC
GTCGGCGCGCGCGTCGCCGT

Product: major facilitator family transporter

Products: NA

Alternate protein names: Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Facilitator Family Transporter; Transporter MFS Superfamily; Carbohydrate Transport Membrane Protein; MFS Family Transporter; Facilitator Superfamily Permease

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MTAFSFARAAGSSVGVLPVIVMSLMQFRVFALFAIGYFVSYVFRGVNLGFAPLITRELGLSAADLGLLTSLYFLGFACAQ
IPAGVLLDRYGPRRVSAALLLVAAAGAWVFGAAHDIGAMMLGRLLIGVGVSVCLGGAFKALAQHFPVARLPLLNGFVMAV
GGLGGVAVGSPLDWLLGFAGWRAVCAGLGAFTVAVAAALWAFAPDARQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVV
TQGVFYAMQSLWVGAYLRDVSGFAPRDAAVLVSVLGFAMMAGCVGFGAAARGLERRGMSLYAFCGFGMALFVATQLAIML
RAPLPAAVLWAAYGVFGGVGILSYAVLAEYFPVHVIGRANTTLTLVIFVLIFGFQVGVGAVLSHWPMRAGHYPAEAHLSA
WGALVALQIASAVWYVLPDRALDKSARHAG

Sequences:

>Translated_430_residues
MTAFSFARAAGSSVGVLPVIVMSLMQFRVFALFAIGYFVSYVFRGVNLGFAPLITRELGLSAADLGLLTSLYFLGFACAQ
IPAGVLLDRYGPRRVSAALLLVAAAGAWVFGAAHDIGAMMLGRLLIGVGVSVCLGGAFKALAQHFPVARLPLLNGFVMAV
GGLGGVAVGSPLDWLLGFAGWRAVCAGLGAFTVAVAAALWAFAPDARQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVV
TQGVFYAMQSLWVGAYLRDVSGFAPRDAAVLVSVLGFAMMAGCVGFGAAARGLERRGMSLYAFCGFGMALFVATQLAIML
RAPLPAAVLWAAYGVFGGVGILSYAVLAEYFPVHVIGRANTTLTLVIFVLIFGFQVGVGAVLSHWPMRAGHYPAEAHLSA
WGALVALQIASAVWYVLPDRALDKSARHAG
>Mature_429_residues
TAFSFARAAGSSVGVLPVIVMSLMQFRVFALFAIGYFVSYVFRGVNLGFAPLITRELGLSAADLGLLTSLYFLGFACAQI
PAGVLLDRYGPRRVSAALLLVAAAGAWVFGAAHDIGAMMLGRLLIGVGVSVCLGGAFKALAQHFPVARLPLLNGFVMAVG
GLGGVAVGSPLDWLLGFAGWRAVCAGLGAFTVAVAAALWAFAPDARQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVVT
QGVFYAMQSLWVGAYLRDVSGFAPRDAAVLVSVLGFAMMAGCVGFGAAARGLERRGMSLYAFCGFGMALFVATQLAIMLR
APLPAAVLWAAYGVFGGVGILSYAVLAEYFPVHVIGRANTTLTLVIFVLIFGFQVGVGAVLSHWPMRAGHYPAEAHLSAW
GALVALQIASAVWYVLPDRALDKSARHAG

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45086; Mature: 44955

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCCC
>Mature Secondary Structure 
TAFSFARAAGSSVGVLPVIVMSLMQFRVFALFAIGYFVSYVFRGVNLGFAPLITRELGL
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC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HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA