| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454264
Identifier: 126454264
GI number: 126454264
Start: 1137585
End: 1138778
Strand: Reverse
Name: 126454264
Synonym: BURPS1106A_1159
Alternate gene names: NA
Gene position: 1138778-1137585 (Counterclockwise)
Preceding gene: 126452559
Following gene: 126455380
Centisome position: 28.55
GC content: 71.19
Gene sequence:
>1194_bases GTGGAGGCCGCCTGTTGCGGCGAACGGGAATCGCTCTGGGCGTTGTTCAAGACCGTGACGGGCGTATCCGCCGTGTCGTG GGGCGGGCTTGCGATGATGGCCCAGCTCGAGCGGCATTACGTCGAGCATGAGCGGCGCATCGATCCGCTTTCGTTCGCCG ATCTCGTCGCGCTGGCGTGGATGATGCCGGGGCCGGTCGGCTGCAACGTCGCGGTTCAGGTCGGCCACGCGCTGCGCGGC CGCGCGGGCGCATGGATCGCCGGCGTCGCGAGCGTGCTGCCGTTCTCCGCCGCGATGACGGTCTTCGCGATCTTCTACCA GACGCCGCTCGTGCGCTCGCTCGCATCGCCCGTGCTCCTGCATCACTTCGCGATGGTGCTCGCCGCGCTGATCGGGCTCA CCTGGTTCAGGCAGGTCCGCGCGCTCGTTCATGCGCCGCTCGAGCGCGTGATCGCCGCGCTCGCGACGGCGCTGCTCGCG CTCGCGCACAACCCCGCCGCGTTCGTCGCGATCCTCGCCGCCGCGTTCGCGGTCGGCTGGCTCGCGAGCGGCCGGAAACA AGGCGAAGCGCTGCGGCTCGCGCTACCCGCGCGGGAATGGCGGCTGCTCGCCTCGCTCGCGCTGCTGATCGCGCTGTTCG CCCTGCCGCTGCCGAACGAATACGAATCGTCGCTGCTCTGGCCGCGGCTCGCGGGCGCGGGCATGACGCTGTTCGGCGGC GGCTTCTCCGCGCTGCCCGTGCTGAAATCGCTGTTCGTCACGCGCTCGACGGGCATCACCGAGCAGGACTTCATGCTCGC GTTCACGCTGTCGCCGGTGTCGCCCGGACCGCTGCTGAACGTCGTGCCGTTTCTCGGCTATCTCGAGGACGGCTGGCGCG GCGCGCTGCTGTCGACCGTCGCGCTGTTCGTGCCGTCCGGCTGCCTCGTCATCTTCGCGCGGCGGCACGTCGAACGGCTG AAGCTGCATCCGCGCTTCGCGAGCGGCATGCGCGTGCTGCGCGCGGCCACCACCGCCTTCCTCGCGATCGCGGCCGTGCG CCTCGTCGCGAAGACGCCCGCCGAGCCCATGTATTGGGCGACCGGCGTGATCGCGTGGCTGTGTCTCGCGCGATTCAAGG TGCCCGTCTACGCGCTGTACGGCGCGGTCGCGGCGGCGTGCGGCGGCTGGCTGATCCTCGCGGCGCACGGGTGA
Upstream 100 bases:
>100_bases CAACGAACGGTTTTCAGCGTGCACAATGAAACGTGCGACGCACGCGTGGCCGCGCGTGCGGCCGCAAGCGCACTGGATAC CAACCATGACAATCGCAAGC
Downstream 100 bases:
>100_bases GCGCGCTTCGCGCGGGCGGCGGCGTTTCGGAGCGGCGCGCGGCCGTCCCGCGTCGGCGCTTTCGCGCTGGGCGCGCGGGG CGAAGTCGCCGGACTCGGCT
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MEAACCGERESLWALFKTVTGVSAVSWGGLAMMAQLERHYVEHERRIDPLSFADLVALAWMMPGPVGCNVAVQVGHALRG RAGAWIAGVASVLPFSAAMTVFAIFYQTPLVRSLASPVLLHHFAMVLAALIGLTWFRQVRALVHAPLERVIAALATALLA LAHNPAAFVAILAAAFAVGWLASGRKQGEALRLALPAREWRLLASLALLIALFALPLPNEYESSLLWPRLAGAGMTLFGG GFSALPVLKSLFVTRSTGITEQDFMLAFTLSPVSPGPLLNVVPFLGYLEDGWRGALLSTVALFVPSGCLVIFARRHVERL KLHPRFASGMRVLRAATTAFLAIAAVRLVAKTPAEPMYWATGVIAWLCLARFKVPVYALYGAVAAACGGWLILAAHG
Sequences:
>Translated_397_residues MEAACCGERESLWALFKTVTGVSAVSWGGLAMMAQLERHYVEHERRIDPLSFADLVALAWMMPGPVGCNVAVQVGHALRG RAGAWIAGVASVLPFSAAMTVFAIFYQTPLVRSLASPVLLHHFAMVLAALIGLTWFRQVRALVHAPLERVIAALATALLA LAHNPAAFVAILAAAFAVGWLASGRKQGEALRLALPAREWRLLASLALLIALFALPLPNEYESSLLWPRLAGAGMTLFGG GFSALPVLKSLFVTRSTGITEQDFMLAFTLSPVSPGPLLNVVPFLGYLEDGWRGALLSTVALFVPSGCLVIFARRHVERL KLHPRFASGMRVLRAATTAFLAIAAVRLVAKTPAEPMYWATGVIAWLCLARFKVPVYALYGAVAAACGGWLILAAHG >Mature_397_residues MEAACCGERESLWALFKTVTGVSAVSWGGLAMMAQLERHYVEHERRIDPLSFADLVALAWMMPGPVGCNVAVQVGHALRG RAGAWIAGVASVLPFSAAMTVFAIFYQTPLVRSLASPVLLHHFAMVLAALIGLTWFRQVRALVHAPLERVIAALATALLA LAHNPAAFVAILAAAFAVGWLASGRKQGEALRLALPAREWRLLASLALLIALFALPLPNEYESSLLWPRLAGAGMTLFGG GFSALPVLKSLFVTRSTGITEQDFMLAFTLSPVSPGPLLNVVPFLGYLEDGWRGALLSTVALFVPSGCLVIFARRHVERL KLHPRFASGMRVLRAATTAFLAIAAVRLVAKTPAEPMYWATGVIAWLCLARFKVPVYALYGAVAAACGGWLILAAHG
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 42469; Mature: 42469
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAACCGERESLWALFKTVTGVSAVSWGGLAMMAQLERHYVEHERRIDPLSFADLVALAW CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MMPGPVGCNVAVQVGHALRGRAGAWIAGVASVLPFSAAMTVFAIFYQTPLVRSLASPVLL HCCCCCCCCHHEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHFAMVLAALIGLTWFRQVRALVHAPLERVIAALATALLALAHNPAAFVAILAAAFAVGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LASGRKQGEALRLALPAREWRLLASLALLIALFALPLPNEYESSLLWPRLAGAGMTLFGG HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHCCCCCEEECC GFSALPVLKSLFVTRSTGITEQDFMLAFTLSPVSPGPLLNVVPFLGYLEDGWRGALLSTV CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHH ALFVPSGCLVIFARRHVERLKLHPRFASGMRVLRAATTAFLAIAAVRLVAKTPAEPMYWA HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TGVIAWLCLARFKVPVYALYGAVAAACGGWLILAAHG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure MEAACCGERESLWALFKTVTGVSAVSWGGLAMMAQLERHYVEHERRIDPLSFADLVALAW CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH MMPGPVGCNVAVQVGHALRGRAGAWIAGVASVLPFSAAMTVFAIFYQTPLVRSLASPVLL HCCCCCCCCHHEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHFAMVLAALIGLTWFRQVRALVHAPLERVIAALATALLALAHNPAAFVAILAAAFAVGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LASGRKQGEALRLALPAREWRLLASLALLIALFALPLPNEYESSLLWPRLAGAGMTLFGG HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHCCCCCEEECC GFSALPVLKSLFVTRSTGITEQDFMLAFTLSPVSPGPLLNVVPFLGYLEDGWRGALLSTV CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHH ALFVPSGCLVIFARRHVERLKLHPRFASGMRVLRAATTAFLAIAAVRLVAKTPAEPMYWA HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TGVIAWLCLARFKVPVYALYGAVAAACGGWLILAAHG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]