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The map label for this gene is 126454042

Identifier: 126454042

GI number: 126454042

Start: 3369110

End: 3369505

Strand: Direct

Name: 126454042

Synonym: BURPS1106A_3460

Alternate gene names: NA

Gene position: 3369110-3369505 (Clockwise)

Preceding gene: 126455212

Following gene: 126451676

Centisome position: 84.47

GC content: 73.23

Gene sequence:

>396_bases
GTGTGCTCGCGCGCGGGCGGCGCACGGGCACGGCACGCGGGCGTTGCGCCGTCCGCGCGCATTTGCGCAAGCGCCGGCGC
GGCGTGCCCATGCGCGCGCCCGGAATTTCCGGAAGCCGTTCAGGTTCGGATGAGGGTCGCGAAAGGCGGGATGCGCGCAG
TCCGCGCAAAGCGCCACGGCGGCGAGATCGAGCCCACGCGCGCGTGGGCTCGCCGCATGCTCGGCCGTCTTACCCGGCTT
GGATGGCGCATCGGGCGCGTGGCGCCGAGCGGAAGTCCCGCCGCGCACGTCGCGTTGGCCTCCGATGCTTCGCATTCCGG
ATATGTCGTCGCGGCGCCCGGCGGCACGCGTCGGCGTGCGATATGCATCCACGCGCATCGACGCCGCGTCGTCTAA

Upstream 100 bases:

>100_bases
GATCCCGCCGCGGCGGGCGCGGCGATCGAAGCGCACATCTCGAACGCCGCGCAACGCGCGGGCGTGTTCTTTCCGACGCC
GAAGCGCTGACGCGGCGCAT

Downstream 100 bases:

>100_bases
TATCGGTCCTCCTCTCTTTCCGTCTTCTTCCCCTTCTCTCACCAAACGCTATGCGGCGAGCGTGATGCGCCATGCGTCGT
TCGTCGCTTGCCGCTTGCCG

Product: LysM repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MCSRAGGARARHAGVAPSARICASAGAACPCARPEFPEAVQVRMRVAKGGMRAVRAKRHGGEIEPTRAWARRMLGRLTRL
GWRIGRVAPSGSPAAHVALASDASHSGYVVAAPGGTRRRAICIHAHRRRVV

Sequences:

>Translated_131_residues
MCSRAGGARARHAGVAPSARICASAGAACPCARPEFPEAVQVRMRVAKGGMRAVRAKRHGGEIEPTRAWARRMLGRLTRL
GWRIGRVAPSGSPAAHVALASDASHSGYVVAAPGGTRRRAICIHAHRRRVV
>Mature_131_residues
MCSRAGGARARHAGVAPSARICASAGAACPCARPEFPEAVQVRMRVAKGGMRAVRAKRHGGEIEPTRAWARRMLGRLTRL
GWRIGRVAPSGSPAAHVALASDASHSGYVVAAPGGTRRRAICIHAHRRRVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13833; Mature: 13833

Theoretical pI: Translated: 12.47; Mature: 12.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSRAGGARARHAGVAPSARICASAGAACPCARPEFPEAVQVRMRVAKGGMRAVRAKRHG
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCC
GEIEPTRAWARRMLGRLTRLGWRIGRVAPSGSPAAHVALASDASHSGYVVAAPGGTRRRA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEE
ICIHAHRRRVV
EEEECCCCCCC
>Mature Secondary Structure
MCSRAGGARARHAGVAPSARICASAGAACPCARPEFPEAVQVRMRVAKGGMRAVRAKRHG
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCC
GEIEPTRAWARRMLGRLTRLGWRIGRVAPSGSPAAHVALASDASHSGYVVAAPGGTRRRA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEE
ICIHAHRRRVV
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA