Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126454039

Identifier: 126454039

GI number: 126454039

Start: 1398029

End: 1398730

Strand: Reverse

Name: 126454039

Synonym: BURPS1106A_1429

Alternate gene names: NA

Gene position: 1398730-1398029 (Counterclockwise)

Preceding gene: 126452934

Following gene: 126454988

Centisome position: 35.07

GC content: 64.39

Gene sequence:

>702_bases
ATGGAACGCGAGATCTTGAAGTTGAAGAAGTCGATCAACGCGAAGCACGACGAATTCCTGCAGGTGCAGAGCGATCGCGA
GCGTGCGCAACAGGTCGCCGAGGCCGGCGGCGGGGATACCGGCGCGATCGCCGAGCTGCAGCGCCAGCGTGCCGAGATGC
TCGGGAAGGCGTATCTCGCCGGCGAGACGGCCGACACCGAACAGATCGATCGCGAGATCGAGAAGCTCGAGGCGCAGCTG
CGCGAAGCCCGGAAGACCGCCGAGGGCGCCGCGGCGGCCGTCGAGCTGCTCCAGGACAAGGCGAACGGTTTGCTCCGGGA
GGAAAGCGTTCTTCGGCAGCGGCAGGCTGCGCTGGCGCGCGACCTGATGCAGACGCGATACGACGAGACGAAGGCGCGCT
ACGTCGAGAAAGTCTACGGGCTGATCAGCGAGCTCCAGAAGCTCTACGCGCTCGAACGCGGTCTCGAATATTTCCGCGGG
CCGAACGAGCCGAAGCCACCGTTGAAGCTCACGGAGCAACTGCTCATCGGTCTGCGGGCGCGTGGGTTGTGTCTTCCGCC
GGGTATCGAGCCGATCAGGTATCCGGACACTGCCTGGGATGTCCACTGTCCCTACGTGATCGACCACGATCACCACGGTG
AATTTGCCGAGAAGGAGATCGAGGCGCTGTCGCAGGAGCTGCGCGGGTACGGGTTCGAGTAA

Upstream 100 bases:

>100_bases
CCGGTCGCGTCACGCCGATCGCGGTCGCCTCGACGGCGGATGGTGGCCCCGCGGCGATCTTCGACTTCTTCAACCGGCGC
AAGCGCAAGGGGAGCAACTG

Downstream 100 bases:

>100_bases
TCGGCCGCCGCCCGATATGGGCGGCTTTCCACCACGTTTGGGGTCTTGAAAATGACGCTACGCGCACCGGCAGGGACACG
AAAAGCGCTCCAAGCTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MEREILKLKKSINAKHDEFLQVQSDRERAQQVAEAGGGDTGAIAELQRQRAEMLGKAYLAGETADTEQIDREIEKLEAQL
REARKTAEGAAAAVELLQDKANGLLREESVLRQRQAALARDLMQTRYDETKARYVEKVYGLISELQKLYALERGLEYFRG
PNEPKPPLKLTEQLLIGLRARGLCLPPGIEPIRYPDTAWDVHCPYVIDHDHHGEFAEKEIEALSQELRGYGFE

Sequences:

>Translated_233_residues
MEREILKLKKSINAKHDEFLQVQSDRERAQQVAEAGGGDTGAIAELQRQRAEMLGKAYLAGETADTEQIDREIEKLEAQL
REARKTAEGAAAAVELLQDKANGLLREESVLRQRQAALARDLMQTRYDETKARYVEKVYGLISELQKLYALERGLEYFRG
PNEPKPPLKLTEQLLIGLRARGLCLPPGIEPIRYPDTAWDVHCPYVIDHDHHGEFAEKEIEALSQELRGYGFE
>Mature_233_residues
MEREILKLKKSINAKHDEFLQVQSDRERAQQVAEAGGGDTGAIAELQRQRAEMLGKAYLAGETADTEQIDREIEKLEAQL
REARKTAEGAAAAVELLQDKANGLLREESVLRQRQAALARDLMQTRYDETKARYVEKVYGLISELQKLYALERGLEYFRG
PNEPKPPLKLTEQLLIGLRARGLCLPPGIEPIRYPDTAWDVHCPYVIDHDHHGEFAEKEIEALSQELRGYGFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26440; Mature: 26440

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEREILKLKKSINAKHDEFLQVQSDRERAQQVAEAGGGDTGAIAELQRQRAEMLGKAYLA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GETADTEQIDREIEKLEAQLREARKTAEGAAAAVELLQDKANGLLREESVLRQRQAALAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLMQTRYDETKARYVEKVYGLISELQKLYALERGLEYFRGPNEPKPPLKLTEQLLIGLRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RGLCLPPGIEPIRYPDTAWDVHCPYVIDHDHHGEFAEKEIEALSQELRGYGFE
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEREILKLKKSINAKHDEFLQVQSDRERAQQVAEAGGGDTGAIAELQRQRAEMLGKAYLA
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GETADTEQIDREIEKLEAQLREARKTAEGAAAAVELLQDKANGLLREESVLRQRQAALAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLMQTRYDETKARYVEKVYGLISELQKLYALERGLEYFRGPNEPKPPLKLTEQLLIGLRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RGLCLPPGIEPIRYPDTAWDVHCPYVIDHDHHGEFAEKEIEALSQELRGYGFE
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA