| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454039
Identifier: 126454039
GI number: 126454039
Start: 1398029
End: 1398730
Strand: Reverse
Name: 126454039
Synonym: BURPS1106A_1429
Alternate gene names: NA
Gene position: 1398730-1398029 (Counterclockwise)
Preceding gene: 126452934
Following gene: 126454988
Centisome position: 35.07
GC content: 64.39
Gene sequence:
>702_bases ATGGAACGCGAGATCTTGAAGTTGAAGAAGTCGATCAACGCGAAGCACGACGAATTCCTGCAGGTGCAGAGCGATCGCGA GCGTGCGCAACAGGTCGCCGAGGCCGGCGGCGGGGATACCGGCGCGATCGCCGAGCTGCAGCGCCAGCGTGCCGAGATGC TCGGGAAGGCGTATCTCGCCGGCGAGACGGCCGACACCGAACAGATCGATCGCGAGATCGAGAAGCTCGAGGCGCAGCTG CGCGAAGCCCGGAAGACCGCCGAGGGCGCCGCGGCGGCCGTCGAGCTGCTCCAGGACAAGGCGAACGGTTTGCTCCGGGA GGAAAGCGTTCTTCGGCAGCGGCAGGCTGCGCTGGCGCGCGACCTGATGCAGACGCGATACGACGAGACGAAGGCGCGCT ACGTCGAGAAAGTCTACGGGCTGATCAGCGAGCTCCAGAAGCTCTACGCGCTCGAACGCGGTCTCGAATATTTCCGCGGG CCGAACGAGCCGAAGCCACCGTTGAAGCTCACGGAGCAACTGCTCATCGGTCTGCGGGCGCGTGGGTTGTGTCTTCCGCC GGGTATCGAGCCGATCAGGTATCCGGACACTGCCTGGGATGTCCACTGTCCCTACGTGATCGACCACGATCACCACGGTG AATTTGCCGAGAAGGAGATCGAGGCGCTGTCGCAGGAGCTGCGCGGGTACGGGTTCGAGTAA
Upstream 100 bases:
>100_bases CCGGTCGCGTCACGCCGATCGCGGTCGCCTCGACGGCGGATGGTGGCCCCGCGGCGATCTTCGACTTCTTCAACCGGCGC AAGCGCAAGGGGAGCAACTG
Downstream 100 bases:
>100_bases TCGGCCGCCGCCCGATATGGGCGGCTTTCCACCACGTTTGGGGTCTTGAAAATGACGCTACGCGCACCGGCAGGGACACG AAAAGCGCTCCAAGCTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MEREILKLKKSINAKHDEFLQVQSDRERAQQVAEAGGGDTGAIAELQRQRAEMLGKAYLAGETADTEQIDREIEKLEAQL REARKTAEGAAAAVELLQDKANGLLREESVLRQRQAALARDLMQTRYDETKARYVEKVYGLISELQKLYALERGLEYFRG PNEPKPPLKLTEQLLIGLRARGLCLPPGIEPIRYPDTAWDVHCPYVIDHDHHGEFAEKEIEALSQELRGYGFE
Sequences:
>Translated_233_residues MEREILKLKKSINAKHDEFLQVQSDRERAQQVAEAGGGDTGAIAELQRQRAEMLGKAYLAGETADTEQIDREIEKLEAQL REARKTAEGAAAAVELLQDKANGLLREESVLRQRQAALARDLMQTRYDETKARYVEKVYGLISELQKLYALERGLEYFRG PNEPKPPLKLTEQLLIGLRARGLCLPPGIEPIRYPDTAWDVHCPYVIDHDHHGEFAEKEIEALSQELRGYGFE >Mature_233_residues MEREILKLKKSINAKHDEFLQVQSDRERAQQVAEAGGGDTGAIAELQRQRAEMLGKAYLAGETADTEQIDREIEKLEAQL REARKTAEGAAAAVELLQDKANGLLREESVLRQRQAALARDLMQTRYDETKARYVEKVYGLISELQKLYALERGLEYFRG PNEPKPPLKLTEQLLIGLRARGLCLPPGIEPIRYPDTAWDVHCPYVIDHDHHGEFAEKEIEALSQELRGYGFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26440; Mature: 26440
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEREILKLKKSINAKHDEFLQVQSDRERAQQVAEAGGGDTGAIAELQRQRAEMLGKAYLA CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC GETADTEQIDREIEKLEAQLREARKTAEGAAAAVELLQDKANGLLREESVLRQRQAALAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLMQTRYDETKARYVEKVYGLISELQKLYALERGLEYFRGPNEPKPPLKLTEQLLIGLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RGLCLPPGIEPIRYPDTAWDVHCPYVIDHDHHGEFAEKEIEALSQELRGYGFE CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEREILKLKKSINAKHDEFLQVQSDRERAQQVAEAGGGDTGAIAELQRQRAEMLGKAYLA CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC GETADTEQIDREIEKLEAQLREARKTAEGAAAAVELLQDKANGLLREESVLRQRQAALAR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLMQTRYDETKARYVEKVYGLISELQKLYALERGLEYFRGPNEPKPPLKLTEQLLIGLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RGLCLPPGIEPIRYPDTAWDVHCPYVIDHDHHGEFAEKEIEALSQELRGYGFE CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA