Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126452934

Identifier: 126452934

GI number: 126452934

Start: 1398730

End: 1399365

Strand: Reverse

Name: 126452934

Synonym: BURPS1106A_1430

Alternate gene names: NA

Gene position: 1399365-1398730 (Counterclockwise)

Preceding gene: 126452911

Following gene: 126454039

Centisome position: 35.09

GC content: 68.4

Gene sequence:

>636_bases
ATGGCAGTGAATCCGAAAACACTCGAGGAATGCAGTGCGTGGCTGAAAAAGGCGAACGCGCTGGATAAGGCGCGCTTTGC
CGCCAAGCAGGCGGCAGCGAAACCGGAGGGAGCGACGAGCTTGAACAAAGCACTGGAGGCATCGCGGCGGCGCGCCGGCG
CCCCGACCGCCGCGGACGTCTCGAAGCAAACCGGCACGGCGCGCTTCGTCAACTGGATCAACGCCGTCACGAAGGCGCAT
GACGACGCTGACTGGGCGGCAGCCGAGCGCGCAGCCCAGCGCATGCAGAAGGGCCCGGCGCCGAACAGCGGCCCGAATTC
CGCAGCGTCGAATCCGCGCGCGGCTCACGTCGACGGGAGCGGCCGCACGACCAACGCCCCGAAGGCCGGCAACGGTGGAG
TCGCATCGCCGTCCGCGCCGACGTCGCATGTGGGGCCATTCGTTGGTTCGAACAGTGCTGCCGCCAACCAGCGTGCCGAT
CAAGTCGCGGCGAACGGCCGCGTTTCCGGTGGTCTCGAGGATCCGCAGATCGGCGCCGGTCGCGTCACGCCGATCGCGGT
CGCCTCGACGGCGGATGGTGGCCCCGCGGCGATCTTCGACTTCTTCAACCGGCGCAAGCGCAAGGGGAGCAACTGA

Upstream 100 bases:

>100_bases
TACGACTGCGGGCGGCAGATCTTCTGGGACGGCGCTACTTGGCGCGACCCGATCACCGGCGCGGCCGTTTGAGCAACACG
AAACGGACAGGGAGAACGTC

Downstream 100 bases:

>100_bases
TGGAACGCGAGATCTTGAAGTTGAAGAAGTCGATCAACGCGAAGCACGACGAATTCCTGCAGGTGCAGAGCGATCGCGAG
CGTGCGCAACAGGTCGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MAVNPKTLEECSAWLKKANALDKARFAAKQAAAKPEGATSLNKALEASRRRAGAPTAADVSKQTGTARFVNWINAVTKAH
DDADWAAAERAAQRMQKGPAPNSGPNSAASNPRAAHVDGSGRTTNAPKAGNGGVASPSAPTSHVGPFVGSNSAAANQRAD
QVAANGRVSGGLEDPQIGAGRVTPIAVASTADGGPAAIFDFFNRRKRKGSN

Sequences:

>Translated_211_residues
MAVNPKTLEECSAWLKKANALDKARFAAKQAAAKPEGATSLNKALEASRRRAGAPTAADVSKQTGTARFVNWINAVTKAH
DDADWAAAERAAQRMQKGPAPNSGPNSAASNPRAAHVDGSGRTTNAPKAGNGGVASPSAPTSHVGPFVGSNSAAANQRAD
QVAANGRVSGGLEDPQIGAGRVTPIAVASTADGGPAAIFDFFNRRKRKGSN
>Mature_210_residues
AVNPKTLEECSAWLKKANALDKARFAAKQAAAKPEGATSLNKALEASRRRAGAPTAADVSKQTGTARFVNWINAVTKAHD
DADWAAAERAAQRMQKGPAPNSGPNSAASNPRAAHVDGSGRTTNAPKAGNGGVASPSAPTSHVGPFVGSNSAAANQRADQ
VAANGRVSGGLEDPQIGAGRVTPIAVASTADGGPAAIFDFFNRRKRKGSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21448; Mature: 21317

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNPKTLEECSAWLKKANALDKARFAAKQAAAKPEGATSLNKALEASRRRAGAPTAADV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH
SKQTGTARFVNWINAVTKAHDDADWAAAERAAQRMQKGPAPNSGPNSAASNPRAAHVDGS
HHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC
GRTTNAPKAGNGGVASPSAPTSHVGPFVGSNSAAANQRADQVAANGRVSGGLEDPQIGAG
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RVTPIAVASTADGGPAAIFDFFNRRKRKGSN
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVNPKTLEECSAWLKKANALDKARFAAKQAAAKPEGATSLNKALEASRRRAGAPTAADV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH
SKQTGTARFVNWINAVTKAHDDADWAAAERAAQRMQKGPAPNSGPNSAASNPRAAHVDGS
HHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCC
GRTTNAPKAGNGGVASPSAPTSHVGPFVGSNSAAANQRADQVAANGRVSGGLEDPQIGAG
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RVTPIAVASTADGGPAAIFDFFNRRKRKGSN
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA