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The map label for this gene is 126454031

Identifier: 126454031

GI number: 126454031

Start: 2946000

End: 2947139

Strand: Direct

Name: 126454031

Synonym: BURPS1106A_3009

Alternate gene names: NA

Gene position: 2946000-2947139 (Clockwise)

Preceding gene: 126452928

Following gene: 126454192

Centisome position: 73.86

GC content: 63.42

Gene sequence:

>1140_bases
ATGAAAAAGACCCTCATCGTTGCCGCTCTTTCCGGCGTTTTCGCAACGGCCGCTCACGCGCAAAGCAGCGTGACGCTGTA
CGGCCTGATCGACGCCGGCATCACCTACACGAACAACCAAGGCGGCCACAGCGCATGGTCGCAATCCACCGGTTCGGTCA
ACGGCAGCCGCTGGGGCCTGCGCGGCGCCGAGGATCTCGGCGGCGGCCTGAAGGCGATTTTCGTGTTGGAAAACGGCTTC
GGCATCAATAACGGCACGCTGAAGCAGAACGGCCGCGAGTTCGGCCGTCAGGCGTTCGTCGGCCTGTCGCACGAGCAATA
CGGCGCGCTGACGCTCGGCCGTCAATACGACAGCGTCGTCGACTACCTCGGGCCGCTGTCGCTGACGGGCACGCAATTCG
GCGGCACGCAGTTCGCCCACCCGTTCGACAACGACAACCTGAACAATTCGTTCCGGATCAACAACGCGGTCAAGTACACG
AGCGTGAACTGGGCGGGCCTGAAATTCGGCGCGTTGTACGGCTTCTCGAACAACAATCAGTTCGCGAACAACCGCGCCTA
TAGCGCGGGCGTATCGTACAGCTACGCCGGCTTCAACATCGGCGCCGGCTACCTGCAGTTGAACAACAACTTCGGCCCGA
CGGTCTCCAACGCATCCGGCGCGGTCGCGCTCGACAACACGTTCGTCGGCAAGCGCCAGCGCGTGTTCGGCGGCGGCCTG
AACTACACGTTCGGCCCGGCAACGGCCGGCTTCGTGTTCACGCAATCGCGCGTCAACCGCGCGACGGCAATCGGCGCGGG
CGCATCGGGCGTGTCGAGCGGCATTGCGCTCGACGGCACGTTCATGCGCTTCAACAACTACGAAGTGAACGCGCGCTACG
CGATCACGCCGGCATGGACGGTGGCCGGTTCGTACACGTACACCGCCGGCTTCATCGAGAACCACCACCCGGGCTGGAAC
CAATTCAACCTGCAAACGGCCTACGCGCTGTCCAAGCGCACGGACGTGTACCTGCAAGGCGTGTATCAGAAGGTCAACAA
CGACGGCACGGGCCTCGGCGCGTACATCAACGGTATCGGCGGCATGTCGTCGACGGAAAAACAGATCGCCGTCACGGCCG
GCCTGCGTCACCGCTTCTAA

Upstream 100 bases:

>100_bases
CGAGCCATGCCCCGGCTCCGTTTCTCGCAGCAGCGGCCGGGAACATCGAAGAACAGGTCAGATATCGTCATCCACCCTGT
TTAGGACGGAGATAAACCCA

Downstream 100 bases:

>100_bases
TCGGCCCCTTCGCGCCGATCGAAAGCGCCCCGCTCGGGGCGCTTTTTTTATGTCCGATCGCATCGGGCCGCATTCGTCGG
CTCCGAAGGCACGCCCCCGC

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKKTLIVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQGGHSAWSQSTGSVNGSRWGLRGAEDLGGGLKAIFVLENGF
GINNGTLKQNGREFGRQAFVGLSHEQYGALTLGRQYDSVVDYLGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNAVKYT
SVNWAGLKFGALYGFSNNNQFANNRAYSAGVSYSYAGFNIGAGYLQLNNNFGPTVSNASGAVALDNTFVGKRQRVFGGGL
NYTFGPATAGFVFTQSRVNRATAIGAGASGVSSGIALDGTFMRFNNYEVNARYAITPAWTVAGSYTYTAGFIENHHPGWN
QFNLQTAYALSKRTDVYLQGVYQKVNNDGTGLGAYINGIGGMSSTEKQIAVTAGLRHRF

Sequences:

>Translated_379_residues
MKKTLIVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQGGHSAWSQSTGSVNGSRWGLRGAEDLGGGLKAIFVLENGF
GINNGTLKQNGREFGRQAFVGLSHEQYGALTLGRQYDSVVDYLGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNAVKYT
SVNWAGLKFGALYGFSNNNQFANNRAYSAGVSYSYAGFNIGAGYLQLNNNFGPTVSNASGAVALDNTFVGKRQRVFGGGL
NYTFGPATAGFVFTQSRVNRATAIGAGASGVSSGIALDGTFMRFNNYEVNARYAITPAWTVAGSYTYTAGFIENHHPGWN
QFNLQTAYALSKRTDVYLQGVYQKVNNDGTGLGAYINGIGGMSSTEKQIAVTAGLRHRF
>Mature_379_residues
MKKTLIVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQGGHSAWSQSTGSVNGSRWGLRGAEDLGGGLKAIFVLENGF
GINNGTLKQNGREFGRQAFVGLSHEQYGALTLGRQYDSVVDYLGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNAVKYT
SVNWAGLKFGALYGFSNNNQFANNRAYSAGVSYSYAGFNIGAGYLQLNNNFGPTVSNASGAVALDNTFVGKRQRVFGGGL
NYTFGPATAGFVFTQSRVNRATAIGAGASGVSSGIALDGTFMRFNNYEVNARYAITPAWTVAGSYTYTAGFIENHHPGWN
QFNLQTAYALSKRTDVYLQGVYQKVNNDGTGLGAYINGIGGMSSTEKQIAVTAGLRHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40297; Mature: 40297

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLIVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQGGHSAWSQSTGSVNGSRWGL
CCCEEEEEEHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCC
RGAEDLGGGLKAIFVLENGFGINNGTLKQNGREFGRQAFVGLSHEQYGALTLGRQYDSVV
CCHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHEEECCCCCCCEEEECCHHHHHH
DYLGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNAVKYTSVNWAGLKFGALYGFSNNNQ
HHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCEEEEEEEEECCCCC
FANNRAYSAGVSYSYAGFNIGAGYLQLNNNFGPTVSNASGAVALDNTFVGKRQRVFGGGL
CCCCCEEECCCEEEECCEECCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEECCCC
NYTFGPATAGFVFTQSRVNRATAIGAGASGVSSGIALDGTFMRFNNYEVNARYAITPAWT
CCEECCCCCCEEEEHHHCCCEEEECCCCCCCCCCEEECEEEEEECCEEEEEEEEECEEEE
VAGSYTYTAGFIENHHPGWNQFNLQTAYALSKRTDVYLQGVYQKVNNDGTGLGAYINGIG
ECCCEEEEECCCCCCCCCCCEEEEEEEEEHHCCCHHHHHHHHHHHCCCCCEEEHEEECCC
GMSSTEKQIAVTAGLRHRF
CCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKKTLIVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQGGHSAWSQSTGSVNGSRWGL
CCCEEEEEEHHHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCC
RGAEDLGGGLKAIFVLENGFGINNGTLKQNGREFGRQAFVGLSHEQYGALTLGRQYDSVV
CCHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHEEECCCCCCCEEEECCHHHHHH
DYLGPLSLTGTQFGGTQFAHPFDNDNLNNSFRINNAVKYTSVNWAGLKFGALYGFSNNNQ
HHHCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCEEEEEEEEECCCCC
FANNRAYSAGVSYSYAGFNIGAGYLQLNNNFGPTVSNASGAVALDNTFVGKRQRVFGGGL
CCCCCEEECCCEEEECCEECCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEECCCC
NYTFGPATAGFVFTQSRVNRATAIGAGASGVSSGIALDGTFMRFNNYEVNARYAITPAWT
CCEECCCCCCEEEEHHHCCCEEEECCCCCCCCCCEEECEEEEEECCEEEEEEEEECEEEE
VAGSYTYTAGFIENHHPGWNQFNLQTAYALSKRTDVYLQGVYQKVNNDGTGLGAYINGIG
ECCCEEEEECCCCCCCCCCCEEEEEEEEEHHCCCHHHHHHHHHHHCCCCCEEEHEEECCC
GMSSTEKQIAVTAGLRHRF
CCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]