| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453974
Identifier: 126453974
GI number: 126453974
Start: 1602725
End: 1603585
Strand: Reverse
Name: 126453974
Synonym: BURPS1106A_1650
Alternate gene names: NA
Gene position: 1603585-1602725 (Counterclockwise)
Preceding gene: 126451537
Following gene: 126455094
Centisome position: 40.21
GC content: 65.85
Gene sequence:
>861_bases GTGATCAATATGCGATTTCTGCCGCGAACATTCACGCCGATTCGGCAGTGCGCGCAGCATAGCACGGTACTTTTCATGCT GCTTTCGATTTTCGGCTCGGCCGGCGCGCAGGCGGAAATCCGCCGAATCACGGCCGCGCAATGCGCGGCGATGCACGCCG AATCCGTGATAAGCGACGATTCACCGGTTCAATGCGGGCGATTGAGAAACGTGTCATTCGATTACGTGAATTTCGACGGC CGGATTCAGCCGGGCGAAATCGTCGTGCTCGATGCGCTCGCCGAACGCGTGCAGACGATTTTCCGCACGCTTTACGACAT GCGCTTTCCGTTGAGCAAGGCCGCGCCGATCGAGCGCTATCACGGCGACGACGACGCGTCGATGCGCGACGACAATACGT CGGCGTTCAATGCGCGGCGCATGACGGGCCGCGCCGAGTGGTCGATGCATGCGTACGGCGTCGCGATCGACGTCAATCCC GTTCAGAACCCGTACGTATCGTTCGGCGAGGACGGCGAGGCGCGCGTGCTGCCCGCATCGGCCGCGAAGACCTCGATGAA CCGGCTCGACGAGCGGCCGGGCAAGCCGGCGCGCCCGGGCATGGCCGAACGCGTCGTCGACGTGTTCGCGGACAACGGCT TGCTGCGCTGGGGCGGCTATTGGGACGATCCGATCGACTATCAGCACTTCGAGGTGGGCTCGCCCGCGCTCGTCGCGCGC ATGGTCGACGCGCCGCCCGACGACGCGCGCCGGATGTTCGAGCAGTACATCGCGTCGTACGCGGACTGCCTCGCGCGCGC ACCGCACGCGAGCCACGCGGCGGCGCGCGCCGCATGCGTGGCCGACGCGCTGCGCGAATGA
Upstream 100 bases:
>100_bases CGTCATCCGGCATCCCTATCGGCTTTCGGTTCATCGGTACTCCGGAACTTCACGCGTATTCATTCACTCAGAATGCCCAT TCATCGAATTCGTCAAATGG
Downstream 100 bases:
>100_bases CGCGCGGCCGCCGCGCCGCCGCGCCCGCGCGCGGCCCGCGCGTTCAGCGCGCGCCGCCTGCCGGCTTCGCGCGCGGATCG TAGCCGTCGGTGAGCGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MINMRFLPRTFTPIRQCAQHSTVLFMLLSIFGSAGAQAEIRRITAAQCAAMHAESVISDDSPVQCGRLRNVSFDYVNFDG RIQPGEIVVLDALAERVQTIFRTLYDMRFPLSKAAPIERYHGDDDASMRDDNTSAFNARRMTGRAEWSMHAYGVAIDVNP VQNPYVSFGEDGEARVLPASAAKTSMNRLDERPGKPARPGMAERVVDVFADNGLLRWGGYWDDPIDYQHFEVGSPALVAR MVDAPPDDARRMFEQYIASYADCLARAPHASHAAARAACVADALRE
Sequences:
>Translated_286_residues MINMRFLPRTFTPIRQCAQHSTVLFMLLSIFGSAGAQAEIRRITAAQCAAMHAESVISDDSPVQCGRLRNVSFDYVNFDG RIQPGEIVVLDALAERVQTIFRTLYDMRFPLSKAAPIERYHGDDDASMRDDNTSAFNARRMTGRAEWSMHAYGVAIDVNP VQNPYVSFGEDGEARVLPASAAKTSMNRLDERPGKPARPGMAERVVDVFADNGLLRWGGYWDDPIDYQHFEVGSPALVAR MVDAPPDDARRMFEQYIASYADCLARAPHASHAAARAACVADALRE >Mature_286_residues MINMRFLPRTFTPIRQCAQHSTVLFMLLSIFGSAGAQAEIRRITAAQCAAMHAESVISDDSPVQCGRLRNVSFDYVNFDG RIQPGEIVVLDALAERVQTIFRTLYDMRFPLSKAAPIERYHGDDDASMRDDNTSAFNARRMTGRAEWSMHAYGVAIDVNP VQNPYVSFGEDGEARVLPASAAKTSMNRLDERPGKPARPGMAERVVDVFADNGLLRWGGYWDDPIDYQHFEVGSPALVAR MVDAPPDDARRMFEQYIASYADCLARAPHASHAAARAACVADALRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31719; Mature: 31719
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINMRFLPRTFTPIRQCAQHSTVLFMLLSIFGSAGAQAEIRRITAAQCAAMHAESVISDD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SPVQCGRLRNVSFDYVNFDGRIQPGEIVVLDALAERVQTIFRTLYDMRFPLSKAAPIERY CCCCCCHHCCCEEEEECCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH HGDDDASMRDDNTSAFNARRMTGRAEWSMHAYGVAIDVNPVQNPYVSFGEDGEARVLPAS CCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEHH AAKTSMNRLDERPGKPARPGMAERVVDVFADNGLLRWGGYWDDPIDYQHFEVGSPALVAR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCCHHHHHH MVDAPPDDARRMFEQYIASYADCLARAPHASHAAARAACVADALRE HHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MINMRFLPRTFTPIRQCAQHSTVLFMLLSIFGSAGAQAEIRRITAAQCAAMHAESVISDD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SPVQCGRLRNVSFDYVNFDGRIQPGEIVVLDALAERVQTIFRTLYDMRFPLSKAAPIERY CCCCCCHHCCCEEEEECCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH HGDDDASMRDDNTSAFNARRMTGRAEWSMHAYGVAIDVNPVQNPYVSFGEDGEARVLPAS CCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEHH AAKTSMNRLDERPGKPARPGMAERVVDVFADNGLLRWGGYWDDPIDYQHFEVGSPALVAR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCCHHHHHH MVDAPPDDARRMFEQYIASYADCLARAPHASHAAARAACVADALRE HHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA