Click here to switch to the map view.

The map label for this gene is mdcE

Identifier: 126451859

GI number: 126451859

Start: 1440994

End: 1441719

Strand: Direct

Name: mdcE

Synonym: BURPS1106A_1485

Alternate gene names: NA

Gene position: 1440994-1441719 (Clockwise)

Preceding gene: 126453963

Following gene: 126454504

Centisome position: 36.13

GC content: 74.1

Gene sequence:

>726_bases
ATGACGCTCGATGACGTGCTGGCTTCACTGTTTCCGTCCGGGCACGACGTCGCGGCCGACGCCGCCGGCCTGCTTGCCGG
GCACGGCATGCTCGCGGGGCGCGCGCTCGACGTGATCGGTGTCGCGCATGGCGCGGCGTTCGGCGTCGACGGCGCGCTCG
CGCTCGCCGAGCGCGTGCTCGCGACGATCCGGCGCGGCGGCGAGACGCCGATTCTCGTGCTCGTCGACGGCGACAGCCAG
CGGATGAGCAAGCGCGACGAACTGCTCGGCCTGAACGAATGCCTCGCGCATCTCGCGAAGTGCCTGCTGCACGCGGACGC
GCTCGGTCATCCGACGATCGGGCTGCTGTACGGGCACGCGGCGGCGGGCGCGTTCATCGCGACGGCGCTCGCCACCCGCA
CGCTCGTCGCGCTGCCGGGCGCGCAACCGGAGGTGATGGATCTGCAGGCGATCTCGCGCGTGACGAAGCTGCCCGTCGAC
GTGTTGCGCGAGAAGGCGCGATCGACCGCGGTGTTCGCGCCGGGGCTCGAGAACTTCGCGAAGACGGGCGCGGTGGACGC
GGTGCTCGATCCGGCGCGCCCGCTCGCCGAGCAACTCGCCGCGGTCCTCGCGCGGCCGGCCGATCGCTGCGACCGGCGCG
ACCGGTACGGTGCCGAGCGCGGCGGCCGGCCCGTCGCGGCCGACGTCGCGCAACGCGTGTATGAGCTCGCGCGCGCCGGC
CGCTGA

Upstream 100 bases:

>100_bases
GACGTGTGGCGCGCGCTCGGCGCGCCCGACGCGGGCGCGATTCCCGCGCTCGACGCCGCCGCGTTCGCGGCGCTCGCCGA
TCGGCTCACGGAGGTGTGCG

Downstream 100 bases:

>100_bases
TGCGCCGCTCGTGCGGCACACGCTCGTGCGCGTGCGCGCGCAGGCGTGGCCGGCGCTGCTCGCCGCGCACGGCGGCATCG
GCACGCTGCCGTTCGTGCGC

Product: malonate decarboxylase, gamma subunit

Products: NA

Alternate protein names: Malonate Decarboxylase Subunit Gamma; Malonate Decarboxylase Subunit MdcE; Malonate Decarboxylase Gamma-Subunit; Malonate Decarboxylase Gamma-Subunit MdcE

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTLDDVLASLFPSGHDVAADAAGLLAGHGMLAGRALDVIGVAHGAAFGVDGALALAERVLATIRRGGETPILVLVDGDSQ
RMSKRDELLGLNECLAHLAKCLLHADALGHPTIGLLYGHAAAGAFIATALATRTLVALPGAQPEVMDLQAISRVTKLPVD
VLREKARSTAVFAPGLENFAKTGAVDAVLDPARPLAEQLAAVLARPADRCDRRDRYGAERGGRPVAADVAQRVYELARAG
R

Sequences:

>Translated_241_residues
MTLDDVLASLFPSGHDVAADAAGLLAGHGMLAGRALDVIGVAHGAAFGVDGALALAERVLATIRRGGETPILVLVDGDSQ
RMSKRDELLGLNECLAHLAKCLLHADALGHPTIGLLYGHAAAGAFIATALATRTLVALPGAQPEVMDLQAISRVTKLPVD
VLREKARSTAVFAPGLENFAKTGAVDAVLDPARPLAEQLAAVLARPADRCDRRDRYGAERGGRPVAADVAQRVYELARAG
R
>Mature_240_residues
TLDDVLASLFPSGHDVAADAAGLLAGHGMLAGRALDVIGVAHGAAFGVDGALALAERVLATIRRGGETPILVLVDGDSQR
MSKRDELLGLNECLAHLAKCLLHADALGHPTIGLLYGHAAAGAFIATALATRTLVALPGAQPEVMDLQAISRVTKLPVDV
LREKARSTAVFAPGLENFAKTGAVDAVLDPARPLAEQLAAVLARPADRCDRRDRYGAERGGRPVAADVAQRVYELARAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25011; Mature: 24880

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDDVLASLFPSGHDVAADAAGLLAGHGMLAGRALDVIGVAHGAAFGVDGALALAERVL
CCHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ATIRRGGETPILVLVDGDSQRMSKRDELLGLNECLAHLAKCLLHADALGHPTIGLLYGHA
HHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AAGAFIATALATRTLVALPGAQPEVMDLQAISRVTKLPVDVLREKARSTAVFAPGLENFA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCEEECCCHHHHH
KTGAVDAVLDPARPLAEQLAAVLARPADRCDRRDRYGAERGGRPVAADVAQRVYELARAG
HHCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCC
R
C
>Mature Secondary Structure 
TLDDVLASLFPSGHDVAADAAGLLAGHGMLAGRALDVIGVAHGAAFGVDGALALAERVL
CHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ATIRRGGETPILVLVDGDSQRMSKRDELLGLNECLAHLAKCLLHADALGHPTIGLLYGHA
HHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AAGAFIATALATRTLVALPGAQPEVMDLQAISRVTKLPVDVLREKARSTAVFAPGLENFA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCEEECCCHHHHH
KTGAVDAVLDPARPLAEQLAAVLARPADRCDRRDRYGAERGGRPVAADVAQRVYELARAG
HHCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA