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The map label for this gene is 126453886

Identifier: 126453886

GI number: 126453886

Start: 608154

End: 610454

Strand: Direct

Name: 126453886

Synonym: BURPS1106A_0637

Alternate gene names: NA

Gene position: 608154-610454 (Clockwise)

Preceding gene: 126452820

Following gene: 126454252

Centisome position: 15.25

GC content: 72.36

Gene sequence:

>2301_bases
ATGCTCGACGACTTCTCGCGCGTGCTGCGTTTCAAGCCGCATCTGCTGGTGCGCGACGCCGGTTCCGGCGCGCTGTATGT
GGTGGACGAATTCAGGCGCTCGGTGCTGCCGGGCGACGTGTTTCCCGCGATCGCCGCGTGCATGCGCGATCGCCTGACGA
TCGCGCAGACGTTCGCGGCGCTCGCCGCGCGGTTTTCTCAATGGGAGGTGCTCGCCGCGCTCGATCAACTGGTGCGGCGC
GGCTACGTGCGCGCCGATGCACCCGGCGAGCGCGACGCCGAGCTTGCCTTCCATGAACGCGCGGGCGTCGACGGCGATGC
GGCGAGCGGCGTCGCGTCGCGGCTTACGGTCGCCGTCGAGGCGTTCGGCGTGGACCCGCGCGCGCAGCTCGACGCGTTCG
CCGCATGCGGGATCGGCGTTGCGCCCGACGCGCCGCTGACGGTCGCGCTCACCGACGGCTACGATCGCGCCGAATTGATC
GTGGCCGCCGAACGCGCGGCGGCGCGCGGCGGCGCATTGCTCGTTGTCGTGGCCGATCGCGTGGAGCCGCTGATCGGCCC
GTTGCTCGGCGCTGCGGCGGGCTTGGCGGCATCGGCGGGATCGACGGCGCCGACGGCGCCGTCGACATCGCCCGCGCCGC
AGGACGCCGCCGATGCGCCGCCCTGCATCGAATGCGTGCGCTACTGGACGGCGCTGAACCATCCCGTCGAGACGCTGCTC
GCGTGCCTGCACGGCGGCGACGCGGCGCGCCTGCCGCCCGCGCGCAGCCGTGCGAGCGCCGCCGCCGTCGCGGCCGTCGT
CGCGTCGTTCGTCGAGCAGATCGCGGTGAACGCGCAGCGCCGCCGTCATGCGGGCTCGCATATCGTGTCGCTGCGCGTCG
ATACGCTGGCCACCGCCGCGCATCGCGTCGTCAGGCGGCCGCAATGTCCGCGCTGCGCTCACGCGGGATGGATGCGCGAG
CAGGCCGAGCGCCCGGTGACGCTCGCGTCGGCGGATGCGGGCGCGCGCCGCGACGGCGGTTATCGGACGCTTGCCGCCGC
CGAGCTATTCAAACGCTACGGACATCTGATTTCCCCGGTGAGCGGGCCGATCGCCTATCTGCATCCGATGCCGGGGCGCA
ACGCCGGCATGCGGCACGTGTACGTCGCGGGCTACCTGGTGTGCCCGCCGAGCGCGCCGCGCGAGAACCGTTTCGACAAG
CTGTGCTCGGGCAAGGGCGCGAGCGACGCGCAGGCGCGCGCCAGCGCGCTCGCCGAGGCGCTGGAGCGCTTCAGCGGCGT
CTATCAGGGCGACGAGGCGGCGCTGCGCGGCAGTCTCGCGCAGTTGTCGGCACACGCGCCGCCGGGCAGCGGGCCGATCG
ACGTCAACGCGCTGCAGCAGTACAGCGATCGCCAGTTCGAGCGGCGCGAGCGCCACAACGCGACGACCGACGACCCGCGC
AAGCAGGTGCCGCGGCGCTTCACGCGCGACAGCGTGATCGACTGGACACCCGCGTGGTCGATCGCGACGGGCGCGCGGCG
GCTCGTGCCGCTCGCGTACTGCTATGCGGAAACGCCCGCGTCGAGCGGCGCCGACTATTGCGTGCACAACCCGAACGGCT
GCGCGGCAGGCGCATGCATCGAGGAAGCGATCCTGCAGGGCCTGCTCGAGCTCGTCGAGCGCGACGCGGTGGCGATCTGG
TGGTACAACATGCTGCGCCGGCCGGCCGTGGACATCGAAAGCTTCGGCGATCCGTACTTCGACGCGCTCGCCGCCGACTA
TGCGTCGCTCGGCTGGCGCTTGTGGGCGCTCGACATCACGCACGACCTGCGCATTCCGGTGTTCGTCGCGCTCGCGCGCG
AAACGGCGACGGGGCGCTTCTCGATCGGCTTCGGCTGCCATCCGGACAGCCGGATCGCGCTGCAGCGCGCGCTCACCGAA
GTGAATCAACTGCTCGACGTCGGCGCGGCGGCGCCGCCGCCGTGGGACGTCGACAAGCTGCCGGACGACGCGTTTCTTCA
TCCGGATCCCGCGCTGCCGCCGGTGCGCGCGCCGGCGCGCGCGCCGCACGGCCGCTGCGATCTGAAGCGTGACATCGAGG
ATTGCGTCGCGCGCTTGGCCGCGGCGGGCATCGATACGCTCGTCGTCGACAAGACGCGGCCCGACATCGGCCTGCCGGTC
GTGCAGGTGATCGCACCCGGCCTGTGTCATTTCTGGCCGCGCTTCGGCGCGCCGCGACTGTATTCGGTGCCCGTCGCGCA
GCGCTGGCGCGAGCGGCCGCGCGACGAGGACGCGCTCAATCGCGCGCTGCTGTTCCTGTAG

Upstream 100 bases:

>100_bases
TGCTGCTGAGCCGTTCATCCGGCGAGCCGCGGCGCGGCCCGGCGCACGTTGCGCGGGCCGCGCCGCGCACGTCGATCGCG
GTATCCGATACGGGGGGGCG

Downstream 100 bases:

>100_bases
CGCGGGCCCGCCGCCGGCGGGCTTGCATGCGCCGGCGCCCGCAACGATGTCATTCGACGAGGAGCGCACGTGACGAATCG
AACGCCGAATCAACCGTTCG

Product: YcaO-like fatty acid binding domain-containing protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 766; Mature: 766

Protein sequence:

>766_residues
MLDDFSRVLRFKPHLLVRDAGSGALYVVDEFRRSVLPGDVFPAIAACMRDRLTIAQTFAALAARFSQWEVLAALDQLVRR
GYVRADAPGERDAELAFHERAGVDGDAASGVASRLTVAVEAFGVDPRAQLDAFAACGIGVAPDAPLTVALTDGYDRAELI
VAAERAAARGGALLVVVADRVEPLIGPLLGAAAGLAASAGSTAPTAPSTSPAPQDAADAPPCIECVRYWTALNHPVETLL
ACLHGGDAARLPPARSRASAAAVAAVVASFVEQIAVNAQRRRHAGSHIVSLRVDTLATAAHRVVRRPQCPRCAHAGWMRE
QAERPVTLASADAGARRDGGYRTLAAAELFKRYGHLISPVSGPIAYLHPMPGRNAGMRHVYVAGYLVCPPSAPRENRFDK
LCSGKGASDAQARASALAEALERFSGVYQGDEAALRGSLAQLSAHAPPGSGPIDVNALQQYSDRQFERRERHNATTDDPR
KQVPRRFTRDSVIDWTPAWSIATGARRLVPLAYCYAETPASSGADYCVHNPNGCAAGACIEEAILQGLLELVERDAVAIW
WYNMLRRPAVDIESFGDPYFDALAADYASLGWRLWALDITHDLRIPVFVALARETATGRFSIGFGCHPDSRIALQRALTE
VNQLLDVGAAAPPPWDVDKLPDDAFLHPDPALPPVRAPARAPHGRCDLKRDIEDCVARLAAAGIDTLVVDKTRPDIGLPV
VQVIAPGLCHFWPRFGAPRLYSVPVAQRWRERPRDEDALNRALLFL

Sequences:

>Translated_766_residues
MLDDFSRVLRFKPHLLVRDAGSGALYVVDEFRRSVLPGDVFPAIAACMRDRLTIAQTFAALAARFSQWEVLAALDQLVRR
GYVRADAPGERDAELAFHERAGVDGDAASGVASRLTVAVEAFGVDPRAQLDAFAACGIGVAPDAPLTVALTDGYDRAELI
VAAERAAARGGALLVVVADRVEPLIGPLLGAAAGLAASAGSTAPTAPSTSPAPQDAADAPPCIECVRYWTALNHPVETLL
ACLHGGDAARLPPARSRASAAAVAAVVASFVEQIAVNAQRRRHAGSHIVSLRVDTLATAAHRVVRRPQCPRCAHAGWMRE
QAERPVTLASADAGARRDGGYRTLAAAELFKRYGHLISPVSGPIAYLHPMPGRNAGMRHVYVAGYLVCPPSAPRENRFDK
LCSGKGASDAQARASALAEALERFSGVYQGDEAALRGSLAQLSAHAPPGSGPIDVNALQQYSDRQFERRERHNATTDDPR
KQVPRRFTRDSVIDWTPAWSIATGARRLVPLAYCYAETPASSGADYCVHNPNGCAAGACIEEAILQGLLELVERDAVAIW
WYNMLRRPAVDIESFGDPYFDALAADYASLGWRLWALDITHDLRIPVFVALARETATGRFSIGFGCHPDSRIALQRALTE
VNQLLDVGAAAPPPWDVDKLPDDAFLHPDPALPPVRAPARAPHGRCDLKRDIEDCVARLAAAGIDTLVVDKTRPDIGLPV
VQVIAPGLCHFWPRFGAPRLYSVPVAQRWRERPRDEDALNRALLFL
>Mature_766_residues
MLDDFSRVLRFKPHLLVRDAGSGALYVVDEFRRSVLPGDVFPAIAACMRDRLTIAQTFAALAARFSQWEVLAALDQLVRR
GYVRADAPGERDAELAFHERAGVDGDAASGVASRLTVAVEAFGVDPRAQLDAFAACGIGVAPDAPLTVALTDGYDRAELI
VAAERAAARGGALLVVVADRVEPLIGPLLGAAAGLAASAGSTAPTAPSTSPAPQDAADAPPCIECVRYWTALNHPVETLL
ACLHGGDAARLPPARSRASAAAVAAVVASFVEQIAVNAQRRRHAGSHIVSLRVDTLATAAHRVVRRPQCPRCAHAGWMRE
QAERPVTLASADAGARRDGGYRTLAAAELFKRYGHLISPVSGPIAYLHPMPGRNAGMRHVYVAGYLVCPPSAPRENRFDK
LCSGKGASDAQARASALAEALERFSGVYQGDEAALRGSLAQLSAHAPPGSGPIDVNALQQYSDRQFERRERHNATTDDPR
KQVPRRFTRDSVIDWTPAWSIATGARRLVPLAYCYAETPASSGADYCVHNPNGCAAGACIEEAILQGLLELVERDAVAIW
WYNMLRRPAVDIESFGDPYFDALAADYASLGWRLWALDITHDLRIPVFVALARETATGRFSIGFGCHPDSRIALQRALTE
VNQLLDVGAAAPPPWDVDKLPDDAFLHPDPALPPVRAPARAPHGRCDLKRDIEDCVARLAAAGIDTLVVDKTRPDIGLPV
VQVIAPGLCHFWPRFGAPRLYSVPVAQRWRERPRDEDALNRALLFL

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 82296; Mature: 82296

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDDFSRVLRFKPHLLVRDAGSGALYVVDEFRRSVLPGDVFPAIAACMRDRLTIAQTFAA
CCCHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LAARFSQWEVLAALDQLVRRGYVRADAPGERDAELAFHERAGVDGDAASGVASRLTVAVE
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
AFGVDPRAQLDAFAACGIGVAPDAPLTVALTDGYDRAELIVAAERAAARGGALLVVVADR
HHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHEEEHHHHHCCCCEEEEEECHH
VEPLIGPLLGAAAGLAASAGSTAPTAPSTSPAPQDAADAPPCIECVRYWTALNHPVETLL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
ACLHGGDAARLPPARSRASAAAVAAVVASFVEQIAVNAQRRRHAGSHIVSLRVDTLATAA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH
HRVVRRPQCPRCAHAGWMREQAERPVTLASADAGARRDGGYRTLAAAELFKRYGHLISPV
HHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
SGPIAYLHPMPGRNAGMRHVYVAGYLVCPPSAPRENRFDKLCSGKGASDAQARASALAEA
CCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
LERFSGVYQGDEAALRGSLAQLSAHAPPGSGPIDVNALQQYSDRQFERRERHNATTDDPR
HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
KQVPRRFTRDSVIDWTPAWSIATGARRLVPLAYCYAETPASSGADYCVHNPNGCAAGACI
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHH
EEAILQGLLELVERDAVAIWWYNMLRRPAVDIESFGDPYFDALAADYASLGWRLWALDIT
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHCEEEEEEEEC
HDLRIPVFVALARETATGRFSIGFGCHPDSRIALQRALTEVNQLLDVGAAAPPPWDVDKL
CCCCCHHHEEEHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDDAFLHPDPALPPVRAPARAPHGRCDLKRDIEDCVARLAAAGIDTLVVDKTRPDIGLPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
VQVIAPGLCHFWPRFGAPRLYSVPVAQRWRERPRDEDALNRALLFL
HHHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLDDFSRVLRFKPHLLVRDAGSGALYVVDEFRRSVLPGDVFPAIAACMRDRLTIAQTFAA
CCCHHHHHHHCCCCEEEEECCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LAARFSQWEVLAALDQLVRRGYVRADAPGERDAELAFHERAGVDGDAASGVASRLTVAVE
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
AFGVDPRAQLDAFAACGIGVAPDAPLTVALTDGYDRAELIVAAERAAARGGALLVVVADR
HHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHEEEHHHHHCCCCEEEEEECHH
VEPLIGPLLGAAAGLAASAGSTAPTAPSTSPAPQDAADAPPCIECVRYWTALNHPVETLL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
ACLHGGDAARLPPARSRASAAAVAAVVASFVEQIAVNAQRRRHAGSHIVSLRVDTLATAA
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH
HRVVRRPQCPRCAHAGWMREQAERPVTLASADAGARRDGGYRTLAAAELFKRYGHLISPV
HHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
SGPIAYLHPMPGRNAGMRHVYVAGYLVCPPSAPRENRFDKLCSGKGASDAQARASALAEA
CCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
LERFSGVYQGDEAALRGSLAQLSAHAPPGSGPIDVNALQQYSDRQFERRERHNATTDDPR
HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
KQVPRRFTRDSVIDWTPAWSIATGARRLVPLAYCYAETPASSGADYCVHNPNGCAAGACI
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHH
EEAILQGLLELVERDAVAIWWYNMLRRPAVDIESFGDPYFDALAADYASLGWRLWALDIT
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHCEEEEEEEEC
HDLRIPVFVALARETATGRFSIGFGCHPDSRIALQRALTEVNQLLDVGAAAPPPWDVDKL
CCCCCHHHEEEHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDDAFLHPDPALPPVRAPARAPHGRCDLKRDIEDCVARLAAAGIDTLVVDKTRPDIGLPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHH
VQVIAPGLCHFWPRFGAPRLYSVPVAQRWRERPRDEDALNRALLFL
HHHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763943 [H]