Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126453869

Identifier: 126453869

GI number: 126453869

Start: 1459907

End: 1460107

Strand: Direct

Name: 126453869

Synonym: BURPS1106A_1504

Alternate gene names: NA

Gene position: 1459907-1460107 (Clockwise)

Preceding gene: 126454909

Following gene: 126452643

Centisome position: 36.6

GC content: 69.15

Gene sequence:

>201_bases
TTGAAAGTTTGTGCTAATCAACCTCGCACCCTAGCGCCTACCTCCTTCATCCCGTTCGTCCGCCGCACGCCGCTTGACGC
AGGCGATGCCGCGAAACCCGCGCCCGTGCGCGCGCGTTTCGCGCTCGATCGCAAGCCCGCGCGCGAAAGCGCCCACGCGC
GCGTGATGCGTCACGCGGCCCGCGAGCGCGCGGCAGGATAG

Upstream 100 bases:

>100_bases
CCGCCGTGCGTCGCGCACCCCGGCGGGGCGCGAGTCCGCACGGGGAGTCCGCACGAAATGCGCTGATCGATTGAAGATAA
GGCCAGTTTCACGCTATAAT

Downstream 100 bases:

>100_bases
ACAGGTCGGCGGCAAGGGTGTCCCCCAAGGAGCCCCCCGTGTTGCCGTCTTTTTCTCCCGCTTTGCTCGCACTCGCCGAC
GGCACGGTCTTTCGTGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MKVCANQPRTLAPTSFIPFVRRTPLDAGDAAKPAPVRARFALDRKPARESAHARVMRHAARERAAG

Sequences:

>Translated_66_residues
MKVCANQPRTLAPTSFIPFVRRTPLDAGDAAKPAPVRARFALDRKPARESAHARVMRHAARERAAG
>Mature_66_residues
MKVCANQPRTLAPTSFIPFVRRTPLDAGDAAKPAPVRARFALDRKPARESAHARVMRHAARERAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7234; Mature: 7234

Theoretical pI: Translated: 12.27; Mature: 12.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVCANQPRTLAPTSFIPFVRRTPLDAGDAAKPAPVRARFALDRKPARESAHARVMRHAA
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
RERAAG
HHHCCC
>Mature Secondary Structure
MKVCANQPRTLAPTSFIPFVRRTPLDAGDAAKPAPVRARFALDRKPARESAHARVMRHAA
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
RERAAG
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA