| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453775
Identifier: 126453775
GI number: 126453775
Start: 1198268
End: 1198648
Strand: Direct
Name: 126453775
Synonym: BURPS1106A_1214
Alternate gene names: NA
Gene position: 1198268-1198648 (Clockwise)
Preceding gene: 126452914
Following gene: 126455186
Centisome position: 30.04
GC content: 70.34
Gene sequence:
>381_bases ATGAAAGCACATCGTACGCTGCGGATTTCGATGCTCGCTGCCGGCGCGCTCGTGTCATCGCTCGCCGCCGCTCAACCCCA TGGCCCCGGCGGGCCGGGTGACGAACGCCACGGGCCGCCTCCCGGCAAGCACGTCGGGCGCGATCACGGCAAGCACGGCG ACGACGGCGCCCGCCCCGGCGAGCATCGCGGCGACGAAAACGCCGCGTGGCGCCGCGGAGAGCGCCTGCCCGACGAATAC CGGGACCGCCAGTACGTGATCGACGACTGGCGCGGGTACCATCTGTCGCCGCCGCCGCGCGGCTATCACTGGGTCGGCAT CGGTGGCGACTATCTGCTCGTGCGCATCTCGACGGGCGTCATTCTGCAGATCGGACCGTAA
Upstream 100 bases:
>100_bases ATCGACCCGCCATTCCCGGCGAATATACGGCGCGATGTGCTACCTTTTTCCATGCGCTCCGGCGCCGACAGCCGGTTGCG CCTTTTCACGGAGGGAAACG
Downstream 100 bases:
>100_bases AGCCGGCCGCCGCGCGGCGCGCCGTTCGCCGCTTTCCGGCGAAAGCGGGTGCGGCGAGCGATGCACCCGCCCCGCGCATT CCGGTCTCCTCGCATTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like; Integral Membrane Protein
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKAHRTLRISMLAAGALVSSLAAAQPHGPGGPGDERHGPPPGKHVGRDHGKHGDDGARPGEHRGDENAAWRRGERLPDEY RDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGVILQIGP
Sequences:
>Translated_126_residues MKAHRTLRISMLAAGALVSSLAAAQPHGPGGPGDERHGPPPGKHVGRDHGKHGDDGARPGEHRGDENAAWRRGERLPDEY RDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGVILQIGP >Mature_126_residues MKAHRTLRISMLAAGALVSSLAAAQPHGPGGPGDERHGPPPGKHVGRDHGKHGDDGARPGEHRGDENAAWRRGERLPDEY RDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGVILQIGP
Specific function: Unknown
COG id: COG5455
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13760; Mature: 13760
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAHRTLRISMLAAGALVSSLAAAQPHGPGGPGDERHGPPPGKHVGRDHGKHGDDGARPG CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EHRGDENAAWRRGERLPDEYRDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGV CCCCCCCCHHHCCCCCCHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCCE ILQIGP EEEECC >Mature Secondary Structure MKAHRTLRISMLAAGALVSSLAAAQPHGPGGPGDERHGPPPGKHVGRDHGKHGDDGARPG CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EHRGDENAAWRRGERLPDEYRDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGV CCCCCCCCHHHCCCCCCHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCCE ILQIGP EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA