Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126453775

Identifier: 126453775

GI number: 126453775

Start: 1198268

End: 1198648

Strand: Direct

Name: 126453775

Synonym: BURPS1106A_1214

Alternate gene names: NA

Gene position: 1198268-1198648 (Clockwise)

Preceding gene: 126452914

Following gene: 126455186

Centisome position: 30.04

GC content: 70.34

Gene sequence:

>381_bases
ATGAAAGCACATCGTACGCTGCGGATTTCGATGCTCGCTGCCGGCGCGCTCGTGTCATCGCTCGCCGCCGCTCAACCCCA
TGGCCCCGGCGGGCCGGGTGACGAACGCCACGGGCCGCCTCCCGGCAAGCACGTCGGGCGCGATCACGGCAAGCACGGCG
ACGACGGCGCCCGCCCCGGCGAGCATCGCGGCGACGAAAACGCCGCGTGGCGCCGCGGAGAGCGCCTGCCCGACGAATAC
CGGGACCGCCAGTACGTGATCGACGACTGGCGCGGGTACCATCTGTCGCCGCCGCCGCGCGGCTATCACTGGGTCGGCAT
CGGTGGCGACTATCTGCTCGTGCGCATCTCGACGGGCGTCATTCTGCAGATCGGACCGTAA

Upstream 100 bases:

>100_bases
ATCGACCCGCCATTCCCGGCGAATATACGGCGCGATGTGCTACCTTTTTCCATGCGCTCCGGCGCCGACAGCCGGTTGCG
CCTTTTCACGGAGGGAAACG

Downstream 100 bases:

>100_bases
AGCCGGCCGCCGCGCGGCGCGCCGTTCGCCGCTTTCCGGCGAAAGCGGGTGCGGCGAGCGATGCACCCGCCCCGCGCATT
CCGGTCTCCTCGCATTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like; Integral Membrane Protein

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKAHRTLRISMLAAGALVSSLAAAQPHGPGGPGDERHGPPPGKHVGRDHGKHGDDGARPGEHRGDENAAWRRGERLPDEY
RDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGVILQIGP

Sequences:

>Translated_126_residues
MKAHRTLRISMLAAGALVSSLAAAQPHGPGGPGDERHGPPPGKHVGRDHGKHGDDGARPGEHRGDENAAWRRGERLPDEY
RDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGVILQIGP
>Mature_126_residues
MKAHRTLRISMLAAGALVSSLAAAQPHGPGGPGDERHGPPPGKHVGRDHGKHGDDGARPGEHRGDENAAWRRGERLPDEY
RDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGVILQIGP

Specific function: Unknown

COG id: COG5455

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13760; Mature: 13760

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAHRTLRISMLAAGALVSSLAAAQPHGPGGPGDERHGPPPGKHVGRDHGKHGDDGARPG
CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EHRGDENAAWRRGERLPDEYRDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGV
CCCCCCCCHHHCCCCCCHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCCE
ILQIGP
EEEECC
>Mature Secondary Structure
MKAHRTLRISMLAAGALVSSLAAAQPHGPGGPGDERHGPPPGKHVGRDHGKHGDDGARPG
CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EHRGDENAAWRRGERLPDEYRDRQYVIDDWRGYHLSPPPRGYHWVGIGGDYLLVRISTGV
CCCCCCCCHHHCCCCCCHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCCE
ILQIGP
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA