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The map label for this gene is ydhP [H]

Identifier: 126453727

GI number: 126453727

Start: 705426

End: 706598

Strand: Direct

Name: ydhP [H]

Synonym: BURPS1106A_0727

Alternate gene names: 126453727

Gene position: 705426-706598 (Clockwise)

Preceding gene: 126452599

Following gene: 126452578

Centisome position: 17.69

GC content: 70.84

Gene sequence:

>1173_bases
ATGCCTCTACCGTTACTCGCGCTCGCGATCAGCGCGTTCGCCATCGGCACCACCGAGTTCGTCATCATGGGCCTGTTGCC
CGACATCGCGCGCGAGCTCGCCGTCACGCTGCCGTCCGCCGGCCTTCTCGTGAGCGGCTACGCGCTCGGCGTCGCCGCGG
GCGCGCCGCTGCTCGCCGTGCTGACGAGCCGCATGCCGCGCAAGGTCGCGTTGCAGCTGCTGATGGCGATCTTCATCGCC
GGCAACGTGCTGTGCGCGCTCGCGCAGAGCTACGGGATGCTGATGGTCGCGCGCGTCGTCACGTCGTTCGCGCACGGTTC
GTTTTTCGGCATCGGCGCGGTGGTCGCCGCATCGCTCGTGAGCGCCGACAAGCGCGCGAGCGCGATCGCGCTGATGTTCA
CGGGGCTCACGCTCGCGAACGTGCTCGGCGTGCCGTTCGGTACCTTCGTCGGCCAGACGCTCGGCTGGCGCGCGACGTTC
TGGATCGTCGCGGCGCTCGGTGTCGCGTCGTTCGCCGGCGTCGCCGCGCTCGTGCCGAAACGGCGCGACGCGGCGGGCGC
GGCGCTTAGCCGCGAGCTGCGCGTGCTCAGGCAGCCGCAGGTGTGGCTCGCGCTCGCGATGACGGTGCTCGGTTTCGGCG
GCGTATTCGTCGTGTTCACCTACATCGCGCCGATTCTCGAGGATGTGACGGGCTTCGCGCCGCGTGCGGTGTCGCTCGTG
CTCGTGCTGTTCGGCGCCGGGCTCACGATCGGCAACACGATCGGCGGCCGGCTCGCGGACCGCGCGCTGATGCCTTCGCT
GGTCGCGATTCTCGTCGCGCTGATCGCCGTGATGGCGGCGTTCGCGAAGACGAGCCACATGCCCGCCGCGGCCGCCGTCA
CCGTATTTGTCTGGGGGATCGCTGCTTTTGCGACGGTTCCTCCGCTACAGTCGCGGGTCGTCGAGAAGGCCGCGCATGCG
CCGAATCTCGCGTCGACGCTGAACATCGGGGCGTTCAACGTCGGCAATGCGGGCGGCGCGTGGCTGGGCGGCGTCGCGCT
GTCGCACGGGGTGCCGCTCGACGCGCTGCCTTGGGTGGCGGCCGTCGTCACGCTCGCCGCGCTCGCCGTCACGGCGCTCG
CCGCGCGGCTCGATACGCGCGTCTCATCGGGCGCGGCTACAGCGGCGCAATGA

Upstream 100 bases:

>100_bases
TTATCAAAAAACTTCGGATTGGGGACAATGCGCGCTCGTCAGATTTCTTGATGCGGTGCGGCATGGGCCGCGCCGTGTCC
GTCCCCCACCGGAGCGTTTC

Downstream 100 bases:

>100_bases
CGCATCGCAAAACGCTGTCCTCTGCGATCCTGATAACAGTGTGAAGATAACTTTGTTTGATGGCACCGTGGCGGATGTTA
GTCTTAGCCTCATCTGAAAC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MPLPLLALAISAFAIGTTEFVIMGLLPDIARELAVTLPSAGLLVSGYALGVAAGAPLLAVLTSRMPRKVALQLLMAIFIA
GNVLCALAQSYGMLMVARVVTSFAHGSFFGIGAVVAASLVSADKRASAIALMFTGLTLANVLGVPFGTFVGQTLGWRATF
WIVAALGVASFAGVAALVPKRRDAAGAALSRELRVLRQPQVWLALAMTVLGFGGVFVVFTYIAPILEDVTGFAPRAVSLV
LVLFGAGLTIGNTIGGRLADRALMPSLVAILVALIAVMAAFAKTSHMPAAAAVTVFVWGIAAFATVPPLQSRVVEKAAHA
PNLASTLNIGAFNVGNAGGAWLGGVALSHGVPLDALPWVAAVVTLAALAVTALAARLDTRVSSGAATAAQ

Sequences:

>Translated_390_residues
MPLPLLALAISAFAIGTTEFVIMGLLPDIARELAVTLPSAGLLVSGYALGVAAGAPLLAVLTSRMPRKVALQLLMAIFIA
GNVLCALAQSYGMLMVARVVTSFAHGSFFGIGAVVAASLVSADKRASAIALMFTGLTLANVLGVPFGTFVGQTLGWRATF
WIVAALGVASFAGVAALVPKRRDAAGAALSRELRVLRQPQVWLALAMTVLGFGGVFVVFTYIAPILEDVTGFAPRAVSLV
LVLFGAGLTIGNTIGGRLADRALMPSLVAILVALIAVMAAFAKTSHMPAAAAVTVFVWGIAAFATVPPLQSRVVEKAAHA
PNLASTLNIGAFNVGNAGGAWLGGVALSHGVPLDALPWVAAVVTLAALAVTALAARLDTRVSSGAATAAQ
>Mature_389_residues
PLPLLALAISAFAIGTTEFVIMGLLPDIARELAVTLPSAGLLVSGYALGVAAGAPLLAVLTSRMPRKVALQLLMAIFIAG
NVLCALAQSYGMLMVARVVTSFAHGSFFGIGAVVAASLVSADKRASAIALMFTGLTLANVLGVPFGTFVGQTLGWRATFW
IVAALGVASFAGVAALVPKRRDAAGAALSRELRVLRQPQVWLALAMTVLGFGGVFVVFTYIAPILEDVTGFAPRAVSLVL
VLFGAGLTIGNTIGGRLADRALMPSLVAILVALIAVMAAFAKTSHMPAAAAVTVFVWGIAAFATVPPLQSRVVEKAAHAP
NLASTLNIGAFNVGNAGGAWLGGVALSHGVPLDALPWVAAVVTLAALAVTALAARLDTRVSSGAATAAQ

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=373, Percent_Identity=49.8659517426273, Blast_Score=307, Evalue=8e-85,
Organism=Escherichia coli, GI1786595, Length=378, Percent_Identity=35.1851851851852, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1787808, Length=370, Percent_Identity=31.6216216216216, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI145693198, Length=336, Percent_Identity=26.7857142857143, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39526; Mature: 39394

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PLPLLALAISAFAIGTTEFVIMGLLPDIARELAVTLPSAGLLVSGYALGVAAGAPLLAV
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH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HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]