Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126453077

Identifier: 126453077

GI number: 126453077

Start: 3196799

End: 3198595

Strand: Reverse

Name: 126453077

Synonym: BURPS1106A_3282

Alternate gene names: NA

Gene position: 3198595-3196799 (Counterclockwise)

Preceding gene: 126454803

Following gene: 126453714

Centisome position: 80.2

GC content: 56.82

Gene sequence:

>1797_bases
ATGAAGCTTGCATTCTTTACGCCGTTTCATCCGGCATGCGGCCCCGGCTTCATGTCGAAGGCCGTTGTCGAACATCTGAA
AGACTATTTTGATGTTACGGTCTTCTATCAATGGCACGCTCTACATCAGCCTTACGAGGTTGAAGACGTCAGCGTTCGTA
TCATCGAAGACGATATGGACATGGAGCCTGTCGCCCGGGAGTTCGACGCGGTAATTTACAACCTGGGCAACAATGAAGAG
AACCACTACTCTATCTTCCAGTGCCTGAAGAGGTTGCCGGGTATCGTCGTGCTGCACGATTTCGTGATGCAGCACGGGAT
CGTCAACGACCTGTTCAATCGTAAACAAAAATCCGATCTGTACTATTGGTTGCTGGCGGCGCTGTACGGAAAGGACGGCG
TGCGGGCGTGTCATGCCAGTGCGCTGAGTTATGCGGGAGGTGTGCGCGGCGGGTGGGATTCGTCGTCGGTGGCCTCGTTT
CCGATGTTCGAGGTGTTTTCCGGGCTCGCGTCGGCGTGTGTGGTGCATTCGAAATTCTTCGAGAACCAGTTGAAACCGCA
CTTCGCCGGTCCGATTCTCATGACGCGGAATCCATACGATCTCAAACGTGTGCCTACCGAAGACGTGATCGAAACCTTCT
ACAAGGTTCGCGGGAAAGCGGGTGGGAAAGTCGTTTTTGCTGCGTTCGGTCATATGTCGCCGAGCAAGTGTATCGACCGG
GTCCTGCGCGTCTTCGGCCACTCGGAGCGACTCAGGAAGGAAGCCCGGCTCATTCTCTGCGGTGGCGCCTCGCCCGAATA
CGATCAGTATCTGCGGCGCCTGTGCGCCGACGGCGATCTCGGTCATTGCGTCGAGTTTCGCGGTTCGGTCAGCGATACCG
AGCTGTATGCGCTTCAGGTCGAGGCCGATGTATTCGTCAACCTCCGGCAGCCCAACACCGAGGGGCAGTCGGGATCGTTG
ATCGAACAGCTCGCGGCCGGCAAGCCGGTGATCTGCTACGACACGGGTTGTTATGGCGATCTGAGTGAAGACGTCGCGTA
TAAAGTACATAGCACGACCGATTTCAACGAACTTCAGCGTGTGTTCGAGCGTCTCCTAAATGGTGTTGCCGAGCGTCGAG
AAGTGGGGTTGCGAGGCCGTGCGGCGGCACTGGAGTACGATTGTGCGCGTTATGCGCGCGACATGTTCGAGTTTGTCTTT
GAGAATCGCGAGTATTTGAAGGCGTTCCAGCGGCGGAATTTCGACGGATTGCGGCCTCTGGGTGTGTCCGGCGCCACCAT
CGATACGCGCCATCCCGAAAACTATTCGAGGACGCAATCCATCTGGGGGGTGCTGGACGGCTTCGTTCACCATGCGTCAT
CGGAGGCGCTTTCCCTGATCCCCGGGGATGCGCGACATCACTACCTGTCCTTTTTGACCCAGCCGTATCGGCCGTTGATC
GACAGCCTCCTGGAATTGTCGGCGAGCGATGTTCCGGAAGTGGAACTGGAGGCGGACGGGACGTCGTTGTATTCGACTGC
ATCGGCCCCGGTGCTGAACACGTCGTTCTGGACAAAGTTGAAATGTCCGGTCAGCGAGCACTTCGCTTATATCGGCTACA
AGAAACTACTGTGTCGCGATCCGGACCTTGCCGGTCTTCGCGACTATGCGGAGAAGTTGGCGTCGGAAACGATATCGAGG
AAGGAAATGATTCTGGCCATGCTCCGCTCCACCGAGTTTGCGGAGCGCTTTGGCGACATTCGGAAAAGCAGCGACTACGT
CAGCCTTATCCGCTGGGCAGGCGCTCAAGTTGCCTAA

Upstream 100 bases:

>100_bases
TCGCGAGCGGCGCGCTGCAGCCGGAGGCGTTCGGCGAAAGCCTGAACCTTCATCAGATGAGTCGTTACAGCCCGGACAAA
ATTTTGATGGACGCACTGCA

Downstream 100 bases:

>100_bases
CGTACGGAGATCGTTTGATGGCACAACGAAAGAAATATTCGGTGTACGGCTCGTGTCAGGCGCCGGCGTTAGCCAAGATG
CTGAACAGTTGTCCGACATT

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: Glycosyltransferase; Glyscosyl Transferase; Glycosyltransferase WcbH; Glycosyl Transferase

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MKLAFFTPFHPACGPGFMSKAVVEHLKDYFDVTVFYQWHALHQPYEVEDVSVRIIEDDMDMEPVAREFDAVIYNLGNNEE
NHYSIFQCLKRLPGIVVLHDFVMQHGIVNDLFNRKQKSDLYYWLLAALYGKDGVRACHASALSYAGGVRGGWDSSSVASF
PMFEVFSGLASACVVHSKFFENQLKPHFAGPILMTRNPYDLKRVPTEDVIETFYKVRGKAGGKVVFAAFGHMSPSKCIDR
VLRVFGHSERLRKEARLILCGGASPEYDQYLRRLCADGDLGHCVEFRGSVSDTELYALQVEADVFVNLRQPNTEGQSGSL
IEQLAAGKPVICYDTGCYGDLSEDVAYKVHSTTDFNELQRVFERLLNGVAERREVGLRGRAAALEYDCARYARDMFEFVF
ENREYLKAFQRRNFDGLRPLGVSGATIDTRHPENYSRTQSIWGVLDGFVHHASSEALSLIPGDARHHYLSFLTQPYRPLI
DSLLELSASDVPEVELEADGTSLYSTASAPVLNTSFWTKLKCPVSEHFAYIGYKKLLCRDPDLAGLRDYAEKLASETISR
KEMILAMLRSTEFAERFGDIRKSSDYVSLIRWAGAQVA

Sequences:

>Translated_598_residues
MKLAFFTPFHPACGPGFMSKAVVEHLKDYFDVTVFYQWHALHQPYEVEDVSVRIIEDDMDMEPVAREFDAVIYNLGNNEE
NHYSIFQCLKRLPGIVVLHDFVMQHGIVNDLFNRKQKSDLYYWLLAALYGKDGVRACHASALSYAGGVRGGWDSSSVASF
PMFEVFSGLASACVVHSKFFENQLKPHFAGPILMTRNPYDLKRVPTEDVIETFYKVRGKAGGKVVFAAFGHMSPSKCIDR
VLRVFGHSERLRKEARLILCGGASPEYDQYLRRLCADGDLGHCVEFRGSVSDTELYALQVEADVFVNLRQPNTEGQSGSL
IEQLAAGKPVICYDTGCYGDLSEDVAYKVHSTTDFNELQRVFERLLNGVAERREVGLRGRAAALEYDCARYARDMFEFVF
ENREYLKAFQRRNFDGLRPLGVSGATIDTRHPENYSRTQSIWGVLDGFVHHASSEALSLIPGDARHHYLSFLTQPYRPLI
DSLLELSASDVPEVELEADGTSLYSTASAPVLNTSFWTKLKCPVSEHFAYIGYKKLLCRDPDLAGLRDYAEKLASETISR
KEMILAMLRSTEFAERFGDIRKSSDYVSLIRWAGAQVA
>Mature_598_residues
MKLAFFTPFHPACGPGFMSKAVVEHLKDYFDVTVFYQWHALHQPYEVEDVSVRIIEDDMDMEPVAREFDAVIYNLGNNEE
NHYSIFQCLKRLPGIVVLHDFVMQHGIVNDLFNRKQKSDLYYWLLAALYGKDGVRACHASALSYAGGVRGGWDSSSVASF
PMFEVFSGLASACVVHSKFFENQLKPHFAGPILMTRNPYDLKRVPTEDVIETFYKVRGKAGGKVVFAAFGHMSPSKCIDR
VLRVFGHSERLRKEARLILCGGASPEYDQYLRRLCADGDLGHCVEFRGSVSDTELYALQVEADVFVNLRQPNTEGQSGSL
IEQLAAGKPVICYDTGCYGDLSEDVAYKVHSTTDFNELQRVFERLLNGVAERREVGLRGRAAALEYDCARYARDMFEFVF
ENREYLKAFQRRNFDGLRPLGVSGATIDTRHPENYSRTQSIWGVLDGFVHHASSEALSLIPGDARHHYLSFLTQPYRPLI
DSLLELSASDVPEVELEADGTSLYSTASAPVLNTSFWTKLKCPVSEHFAYIGYKKLLCRDPDLAGLRDYAEKLASETISR
KEMILAMLRSTEFAERFGDIRKSSDYVSLIRWAGAQVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67451; Mature: 67451

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAFFTPFHPACGPGFMSKAVVEHLKDYFDVTVFYQWHALHQPYEVEDVSVRIIEDDMD
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEEHHHCCCCCCCCCEEEEEECCCC
MEPVAREFDAVIYNLGNNEENHYSIFQCLKRLPGIVVLHDFVMQHGIVNDLFNRKQKSDL
CCHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
YYWLLAALYGKDGVRACHASALSYAGGVRGGWDSSSVASFPMFEVFSGLASACVVHSKFF
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ENQLKPHFAGPILMTRNPYDLKRVPTEDVIETFYKVRGKAGGKVVFAAFGHMSPSKCIDR
HHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH
VLRVFGHSERLRKEARLILCGGASPEYDQYLRRLCADGDLGHCVEFRGSVSDTELYALQV
HHHHHCCHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEE
EADVFVNLRQPNTEGQSGSLIEQLAAGKPVICYDTGCYGDLSEDVAYKVHSTTDFNELQR
EEEEEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHEEEEECCCCHHHHHH
VFERLLNGVAERREVGLRGRAAALEYDCARYARDMFEFVFENREYLKAFQRRNFDGLRPL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
GVSGATIDTRHPENYSRTQSIWGVLDGFVHHASSEALSLIPGDARHHYLSFLTQPYRPLI
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEECCCCHHHHHHHHHHCCHHHHH
DSLLELSASDVPEVELEADGTSLYSTASAPVLNTSFWTKLKCPVSEHFAYIGYKKLLCRD
HHHHHHCCCCCCCEEEECCCCCCCCCCCCCEECCCCHHEEECCHHHHHHHHHHHHHHCCC
PDLAGLRDYAEKLASETISRKEMILAMLRSTEFAERFGDIRKSSDYVSLIRWAGAQVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLAFFTPFHPACGPGFMSKAVVEHLKDYFDVTVFYQWHALHQPYEVEDVSVRIIEDDMD
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEEHHHCCCCCCCCCEEEEEECCCC
MEPVAREFDAVIYNLGNNEENHYSIFQCLKRLPGIVVLHDFVMQHGIVNDLFNRKQKSDL
CCHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
YYWLLAALYGKDGVRACHASALSYAGGVRGGWDSSSVASFPMFEVFSGLASACVVHSKFF
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ENQLKPHFAGPILMTRNPYDLKRVPTEDVIETFYKVRGKAGGKVVFAAFGHMSPSKCIDR
HHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH
VLRVFGHSERLRKEARLILCGGASPEYDQYLRRLCADGDLGHCVEFRGSVSDTELYALQV
HHHHHCCHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEE
EADVFVNLRQPNTEGQSGSLIEQLAAGKPVICYDTGCYGDLSEDVAYKVHSTTDFNELQR
EEEEEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHEEEEECCCCHHHHHH
VFERLLNGVAERREVGLRGRAAALEYDCARYARDMFEFVFENREYLKAFQRRNFDGLRPL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
GVSGATIDTRHPENYSRTQSIWGVLDGFVHHASSEALSLIPGDARHHYLSFLTQPYRPLI
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEECCCCHHHHHHHHHHCCHHHHH
DSLLELSASDVPEVELEADGTSLYSTASAPVLNTSFWTKLKCPVSEHFAYIGYKKLLCRD
HHHHHHCCCCCCCEEEECCCCCCCCCCCCCEECCCCHHEEECCHHHHHHHHHHHHHHCCC
PDLAGLRDYAEKLASETISRKEMILAMLRSTEFAERFGDIRKSSDYVSLIRWAGAQVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA