| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453077
Identifier: 126453077
GI number: 126453077
Start: 3196799
End: 3198595
Strand: Reverse
Name: 126453077
Synonym: BURPS1106A_3282
Alternate gene names: NA
Gene position: 3198595-3196799 (Counterclockwise)
Preceding gene: 126454803
Following gene: 126453714
Centisome position: 80.2
GC content: 56.82
Gene sequence:
>1797_bases ATGAAGCTTGCATTCTTTACGCCGTTTCATCCGGCATGCGGCCCCGGCTTCATGTCGAAGGCCGTTGTCGAACATCTGAA AGACTATTTTGATGTTACGGTCTTCTATCAATGGCACGCTCTACATCAGCCTTACGAGGTTGAAGACGTCAGCGTTCGTA TCATCGAAGACGATATGGACATGGAGCCTGTCGCCCGGGAGTTCGACGCGGTAATTTACAACCTGGGCAACAATGAAGAG AACCACTACTCTATCTTCCAGTGCCTGAAGAGGTTGCCGGGTATCGTCGTGCTGCACGATTTCGTGATGCAGCACGGGAT CGTCAACGACCTGTTCAATCGTAAACAAAAATCCGATCTGTACTATTGGTTGCTGGCGGCGCTGTACGGAAAGGACGGCG TGCGGGCGTGTCATGCCAGTGCGCTGAGTTATGCGGGAGGTGTGCGCGGCGGGTGGGATTCGTCGTCGGTGGCCTCGTTT CCGATGTTCGAGGTGTTTTCCGGGCTCGCGTCGGCGTGTGTGGTGCATTCGAAATTCTTCGAGAACCAGTTGAAACCGCA CTTCGCCGGTCCGATTCTCATGACGCGGAATCCATACGATCTCAAACGTGTGCCTACCGAAGACGTGATCGAAACCTTCT ACAAGGTTCGCGGGAAAGCGGGTGGGAAAGTCGTTTTTGCTGCGTTCGGTCATATGTCGCCGAGCAAGTGTATCGACCGG GTCCTGCGCGTCTTCGGCCACTCGGAGCGACTCAGGAAGGAAGCCCGGCTCATTCTCTGCGGTGGCGCCTCGCCCGAATA CGATCAGTATCTGCGGCGCCTGTGCGCCGACGGCGATCTCGGTCATTGCGTCGAGTTTCGCGGTTCGGTCAGCGATACCG AGCTGTATGCGCTTCAGGTCGAGGCCGATGTATTCGTCAACCTCCGGCAGCCCAACACCGAGGGGCAGTCGGGATCGTTG ATCGAACAGCTCGCGGCCGGCAAGCCGGTGATCTGCTACGACACGGGTTGTTATGGCGATCTGAGTGAAGACGTCGCGTA TAAAGTACATAGCACGACCGATTTCAACGAACTTCAGCGTGTGTTCGAGCGTCTCCTAAATGGTGTTGCCGAGCGTCGAG AAGTGGGGTTGCGAGGCCGTGCGGCGGCACTGGAGTACGATTGTGCGCGTTATGCGCGCGACATGTTCGAGTTTGTCTTT GAGAATCGCGAGTATTTGAAGGCGTTCCAGCGGCGGAATTTCGACGGATTGCGGCCTCTGGGTGTGTCCGGCGCCACCAT CGATACGCGCCATCCCGAAAACTATTCGAGGACGCAATCCATCTGGGGGGTGCTGGACGGCTTCGTTCACCATGCGTCAT CGGAGGCGCTTTCCCTGATCCCCGGGGATGCGCGACATCACTACCTGTCCTTTTTGACCCAGCCGTATCGGCCGTTGATC GACAGCCTCCTGGAATTGTCGGCGAGCGATGTTCCGGAAGTGGAACTGGAGGCGGACGGGACGTCGTTGTATTCGACTGC ATCGGCCCCGGTGCTGAACACGTCGTTCTGGACAAAGTTGAAATGTCCGGTCAGCGAGCACTTCGCTTATATCGGCTACA AGAAACTACTGTGTCGCGATCCGGACCTTGCCGGTCTTCGCGACTATGCGGAGAAGTTGGCGTCGGAAACGATATCGAGG AAGGAAATGATTCTGGCCATGCTCCGCTCCACCGAGTTTGCGGAGCGCTTTGGCGACATTCGGAAAAGCAGCGACTACGT CAGCCTTATCCGCTGGGCAGGCGCTCAAGTTGCCTAA
Upstream 100 bases:
>100_bases TCGCGAGCGGCGCGCTGCAGCCGGAGGCGTTCGGCGAAAGCCTGAACCTTCATCAGATGAGTCGTTACAGCCCGGACAAA ATTTTGATGGACGCACTGCA
Downstream 100 bases:
>100_bases CGTACGGAGATCGTTTGATGGCACAACGAAAGAAATATTCGGTGTACGGCTCGTGTCAGGCGCCGGCGTTAGCCAAGATG CTGAACAGTTGTCCGACATT
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glyscosyl Transferase; Glycosyltransferase WcbH; Glycosyl Transferase
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MKLAFFTPFHPACGPGFMSKAVVEHLKDYFDVTVFYQWHALHQPYEVEDVSVRIIEDDMDMEPVAREFDAVIYNLGNNEE NHYSIFQCLKRLPGIVVLHDFVMQHGIVNDLFNRKQKSDLYYWLLAALYGKDGVRACHASALSYAGGVRGGWDSSSVASF PMFEVFSGLASACVVHSKFFENQLKPHFAGPILMTRNPYDLKRVPTEDVIETFYKVRGKAGGKVVFAAFGHMSPSKCIDR VLRVFGHSERLRKEARLILCGGASPEYDQYLRRLCADGDLGHCVEFRGSVSDTELYALQVEADVFVNLRQPNTEGQSGSL IEQLAAGKPVICYDTGCYGDLSEDVAYKVHSTTDFNELQRVFERLLNGVAERREVGLRGRAAALEYDCARYARDMFEFVF ENREYLKAFQRRNFDGLRPLGVSGATIDTRHPENYSRTQSIWGVLDGFVHHASSEALSLIPGDARHHYLSFLTQPYRPLI DSLLELSASDVPEVELEADGTSLYSTASAPVLNTSFWTKLKCPVSEHFAYIGYKKLLCRDPDLAGLRDYAEKLASETISR KEMILAMLRSTEFAERFGDIRKSSDYVSLIRWAGAQVA
Sequences:
>Translated_598_residues MKLAFFTPFHPACGPGFMSKAVVEHLKDYFDVTVFYQWHALHQPYEVEDVSVRIIEDDMDMEPVAREFDAVIYNLGNNEE NHYSIFQCLKRLPGIVVLHDFVMQHGIVNDLFNRKQKSDLYYWLLAALYGKDGVRACHASALSYAGGVRGGWDSSSVASF PMFEVFSGLASACVVHSKFFENQLKPHFAGPILMTRNPYDLKRVPTEDVIETFYKVRGKAGGKVVFAAFGHMSPSKCIDR VLRVFGHSERLRKEARLILCGGASPEYDQYLRRLCADGDLGHCVEFRGSVSDTELYALQVEADVFVNLRQPNTEGQSGSL IEQLAAGKPVICYDTGCYGDLSEDVAYKVHSTTDFNELQRVFERLLNGVAERREVGLRGRAAALEYDCARYARDMFEFVF ENREYLKAFQRRNFDGLRPLGVSGATIDTRHPENYSRTQSIWGVLDGFVHHASSEALSLIPGDARHHYLSFLTQPYRPLI DSLLELSASDVPEVELEADGTSLYSTASAPVLNTSFWTKLKCPVSEHFAYIGYKKLLCRDPDLAGLRDYAEKLASETISR KEMILAMLRSTEFAERFGDIRKSSDYVSLIRWAGAQVA >Mature_598_residues MKLAFFTPFHPACGPGFMSKAVVEHLKDYFDVTVFYQWHALHQPYEVEDVSVRIIEDDMDMEPVAREFDAVIYNLGNNEE NHYSIFQCLKRLPGIVVLHDFVMQHGIVNDLFNRKQKSDLYYWLLAALYGKDGVRACHASALSYAGGVRGGWDSSSVASF PMFEVFSGLASACVVHSKFFENQLKPHFAGPILMTRNPYDLKRVPTEDVIETFYKVRGKAGGKVVFAAFGHMSPSKCIDR VLRVFGHSERLRKEARLILCGGASPEYDQYLRRLCADGDLGHCVEFRGSVSDTELYALQVEADVFVNLRQPNTEGQSGSL IEQLAAGKPVICYDTGCYGDLSEDVAYKVHSTTDFNELQRVFERLLNGVAERREVGLRGRAAALEYDCARYARDMFEFVF ENREYLKAFQRRNFDGLRPLGVSGATIDTRHPENYSRTQSIWGVLDGFVHHASSEALSLIPGDARHHYLSFLTQPYRPLI DSLLELSASDVPEVELEADGTSLYSTASAPVLNTSFWTKLKCPVSEHFAYIGYKKLLCRDPDLAGLRDYAEKLASETISR KEMILAMLRSTEFAERFGDIRKSSDYVSLIRWAGAQVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67451; Mature: 67451
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAFFTPFHPACGPGFMSKAVVEHLKDYFDVTVFYQWHALHQPYEVEDVSVRIIEDDMD CCEEEECCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEEHHHCCCCCCCCCEEEEEECCCC MEPVAREFDAVIYNLGNNEENHYSIFQCLKRLPGIVVLHDFVMQHGIVNDLFNRKQKSDL CCHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHH YYWLLAALYGKDGVRACHASALSYAGGVRGGWDSSSVASFPMFEVFSGLASACVVHSKFF HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ENQLKPHFAGPILMTRNPYDLKRVPTEDVIETFYKVRGKAGGKVVFAAFGHMSPSKCIDR HHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH VLRVFGHSERLRKEARLILCGGASPEYDQYLRRLCADGDLGHCVEFRGSVSDTELYALQV HHHHHCCHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEE EADVFVNLRQPNTEGQSGSLIEQLAAGKPVICYDTGCYGDLSEDVAYKVHSTTDFNELQR EEEEEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHEEEEECCCCHHHHHH VFERLLNGVAERREVGLRGRAAALEYDCARYARDMFEFVFENREYLKAFQRRNFDGLRPL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC GVSGATIDTRHPENYSRTQSIWGVLDGFVHHASSEALSLIPGDARHHYLSFLTQPYRPLI CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEECCCCHHHHHHHHHHCCHHHHH DSLLELSASDVPEVELEADGTSLYSTASAPVLNTSFWTKLKCPVSEHFAYIGYKKLLCRD HHHHHHCCCCCCCEEEECCCCCCCCCCCCCEECCCCHHEEECCHHHHHHHHHHHHHHCCC PDLAGLRDYAEKLASETISRKEMILAMLRSTEFAERFGDIRKSSDYVSLIRWAGAQVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure MKLAFFTPFHPACGPGFMSKAVVEHLKDYFDVTVFYQWHALHQPYEVEDVSVRIIEDDMD CCEEEECCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEEHHHCCCCCCCCCEEEEEECCCC MEPVAREFDAVIYNLGNNEENHYSIFQCLKRLPGIVVLHDFVMQHGIVNDLFNRKQKSDL CCHHHHHHHHHHEECCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHH YYWLLAALYGKDGVRACHASALSYAGGVRGGWDSSSVASFPMFEVFSGLASACVVHSKFF HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ENQLKPHFAGPILMTRNPYDLKRVPTEDVIETFYKVRGKAGGKVVFAAFGHMSPSKCIDR HHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH VLRVFGHSERLRKEARLILCGGASPEYDQYLRRLCADGDLGHCVEFRGSVSDTELYALQV HHHHHCCHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEEE EADVFVNLRQPNTEGQSGSLIEQLAAGKPVICYDTGCYGDLSEDVAYKVHSTTDFNELQR EEEEEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHEEEEECCCCHHHHHH VFERLLNGVAERREVGLRGRAAALEYDCARYARDMFEFVFENREYLKAFQRRNFDGLRPL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC GVSGATIDTRHPENYSRTQSIWGVLDGFVHHASSEALSLIPGDARHHYLSFLTQPYRPLI CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEECCCCHHHHHHHHHHCCHHHHH DSLLELSASDVPEVELEADGTSLYSTASAPVLNTSFWTKLKCPVSEHFAYIGYKKLLCRD HHHHHHCCCCCCCEEEECCCCCCCCCCCCCEECCCCHHEEECCHHHHHHHHHHHHHHCCC PDLAGLRDYAEKLASETISRKEMILAMLRSTEFAERFGDIRKSSDYVSLIRWAGAQVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA