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The map label for this gene is ybgC [C]

Identifier: 126453571

GI number: 126453571

Start: 3149646

End: 3150140

Strand: Direct

Name: ybgC [C]

Synonym: BURPS1106A_3237

Alternate gene names: 126453571

Gene position: 3149646-3150140 (Clockwise)

Preceding gene: 126453550

Following gene: 126452711

Centisome position: 78.97

GC content: 66.67

Gene sequence:

>495_bases
ATGCGCGCCATGATCGAACCCAGCCGACAGCCCGACGCGGCACCCGATTTCGCGTGGCCGGTCCGCGTGTATTACGAAGA
CACCGACGCCGGCGGCGTCGTCTATTACGCGAATTACCTGAAATTCTTCGAGCGCGCGCGCACCGAATGGCTGCGCGCAT
GCGGGATCGACCAGAGCCGGATCGCCGACGAAACAGGCGCGATTTTCATCGTTCGCCATGCGGCGCTCGACTATCGCGCG
CCGGCGCGGCTCGACGACGCGCTGCAAATCGTCTGCAGAATCGCACGCATCGGCCGCGCGAGCGTCGAATTCGAACAACA
GGCGTGGCGGGGAAACACGCTGCTCGTCGCCGCCGACATCCGGATCGGCTGCGTCGATCGCTCGGCATTCAAGCCGACCG
CGATCCCGCCCCCCGTCTTCGCCGCACTCGAGCGCGGACCGGCCGCAAGCGACACGGCAAGCCGTGTCAACGGCGCCTGC
GTGAGTGCCGTTTAG

Upstream 100 bases:

>100_bases
CTAAGCGCGCCGCCGGGGCGCGCACGCGGCCCGGCGGCCGGCCGGCAAAGGCAACATTCCGTTACGAATCCGGGGAATCG
GGGTCGCCCGATCCGGTAGA

Downstream 100 bases:

>100_bases
ACAAAGCCGATGAACTCGACCCCATGATCCGCCACTAAGCAAGGTTCGGCGGAAAGTTTCCGGCGATGCGCCGCGCAAGC
GGCGCGCAGCCGAACGCTCC

Product: thioesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRAMIEPSRQPDAAPDFAWPVRVYYEDTDAGGVVYYANYLKFFERARTEWLRACGIDQSRIADETGAIFIVRHAALDYRA
PARLDDALQIVCRIARIGRASVEFEQQAWRGNTLLVAADIRIGCVDRSAFKPTAIPPPVFAALERGPAASDTASRVNGAC
VSAV

Sequences:

>Translated_164_residues
MRAMIEPSRQPDAAPDFAWPVRVYYEDTDAGGVVYYANYLKFFERARTEWLRACGIDQSRIADETGAIFIVRHAALDYRA
PARLDDALQIVCRIARIGRASVEFEQQAWRGNTLLVAADIRIGCVDRSAFKPTAIPPPVFAALERGPAASDTASRVNGAC
VSAV
>Mature_164_residues
MRAMIEPSRQPDAAPDFAWPVRVYYEDTDAGGVVYYANYLKFFERARTEWLRACGIDQSRIADETGAIFIVRHAALDYRA
PARLDDALQIVCRIARIGRASVEFEQQAWRGNTLLVAADIRIGCVDRSAFKPTAIPPPVFAALERGPAASDTASRVNGAC
VSAV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=130, Percent_Identity=47.6923076923077, Blast_Score=117, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 18064; Mature: 18064

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMIEPSRQPDAAPDFAWPVRVYYEDTDAGGVVYYANYLKFFERARTEWLRACGIDQSR
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHH
IADETGAIFIVRHAALDYRAPARLDDALQIVCRIARIGRASVEFEQQAWRGNTLLVAADI
HHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECC
RIGCVDRSAFKPTAIPPPVFAALERGPAASDTASRVNGACVSAV
EEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHCCCEEECCC
>Mature Secondary Structure
MRAMIEPSRQPDAAPDFAWPVRVYYEDTDAGGVVYYANYLKFFERARTEWLRACGIDQSR
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHH
IADETGAIFIVRHAALDYRAPARLDDALQIVCRIARIGRASVEFEQQAWRGNTLLVAADI
HHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECC
RIGCVDRSAFKPTAIPPPVFAALERGPAASDTASRVNGACVSAV
EEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]