Click here to switch to the map view.

The map label for this gene is capM [H]

Identifier: 126453504

GI number: 126453504

Start: 3042917

End: 3044074

Strand: Direct

Name: capM [H]

Synonym: BURPS1106A_3123

Alternate gene names: 126453504

Gene position: 3042917-3044074 (Clockwise)

Preceding gene: 126451781

Following gene: 126452926

Centisome position: 76.29

GC content: 69.86

Gene sequence:

>1158_bases
ATGATTTCTTTCCAGTCCGACATGAGTTCCGCTTCCGCCCCGCGCATCGTTCTCGTCTGCAATACCGCCTGGGCGATCTA
TACGTACCGGCAAGGCCTGCTTCGCATGCTGATCGCGCGCGGCGCGCAGGTGACCGTGCTCGCGCCGCGCGACCGCACCG
TCGAGCCGCTCGTGCGCATGGGCTGCCGCTACGCGGAGCTGCCCGTCGCCTCGAAAGGCACGAGCCCGCGCGAGGACCTG
CGCACGCTCATCGCGCTGTATCGGCACTACCGCGCGATCCGGCCCGACCTCGTGTTCCATTACACGATCAAGCCGAACAT
CTACGGCTCGATCGCCGCGTGGCTCGCGCGCGTGCCGTCGATCGCGGTGACGACGGGCCTCGGCTACGTGTTCATCCAGC
AGAGCCACGCCGCACGCGTCGCGAAGCAGCTGTACCGCTTCGCGTTGCGCTTTCCGCGCGAGGTCTGGTTCCTGAACCGC
GACGATCTGCACACGTTCACGCACGAGCAGCTCCTCGCGCATCCGGCGCGCGCGCGCCTGCTGCACGGCGAGGGCGTCGA
CCTCGAGCAGTTCGCGCTCGCGCCGCTGCCCGCGCGCGACACGTTCACCTTCGTGCTGATCGGCCGGCTGCTGTGGGACA
AGGGCGTGCGCGAATACGTCGATGCGGCGCGCATGCTGCGCGCGCGCTATCCGCACGCGCGCTTCGCGCTGCTCGGCCCC
GTCGGCGTCGACAATCCGAGCGCGATCTCGCAGGCCGACGTCGACGCGTGGGTGCGCGAAGGCGTGATCGATTACCTCGG
CGAGGCGCACGACGTGCGGCCGCACATCGCCCGCGCCGATTGCGTCGTGCTGCCGTCCTATCGCGAAGGCGTGCCGCGCA
CGCTGATGGAGGCGTCCGCGATGGGCCGGCCGATCGTCGCGACCGACGTGCCGGGCTGCCGCGACGTCGTCGCCGACGGC
AGCACCGGGCTGCTGTGCGCCGCGCGCGACAGCGCGAGCCTCGCCGCGCAGCTCGCGCGGATGCTCGACATGAGCGCGGC
CGAGCGGCGCGCGATGGGCGAGCGCGGCCGGAGAAAGATCGTCGCGGAATTCGACGAGGCGAAGGTCGTCGAGCGTTATC
ATCAGACCATTTCGGCCCTGACGGGCATCACACTTTGA

Upstream 100 bases:

>100_bases
CATTTCGTCACGCCGTACTCGACGCTGCAGCGCGCGAAGCGCCTGCTGTTCGCGCGGCGCGGCGCGGCATGACGCGCCCC
GTCACGTTCGCGCGCATCCG

Downstream 100 bases:

>100_bases
CGGAGCAATCAGCAATGAGCACGAAGGGCACGATCCTCGTCACCGGCGGCGCGGGCTATATCGGTTCGCACACCGCCGTC
GAGCTGCTCGCGCACGGCTA

Product: glycosyl transferase, group 1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MISFQSDMSSASAPRIVLVCNTAWAIYTYRQGLLRMLIARGAQVTVLAPRDRTVEPLVRMGCRYAELPVASKGTSPREDL
RTLIALYRHYRAIRPDLVFHYTIKPNIYGSIAAWLARVPSIAVTTGLGYVFIQQSHAARVAKQLYRFALRFPREVWFLNR
DDLHTFTHEQLLAHPARARLLHGEGVDLEQFALAPLPARDTFTFVLIGRLLWDKGVREYVDAARMLRARYPHARFALLGP
VGVDNPSAISQADVDAWVREGVIDYLGEAHDVRPHIARADCVVLPSYREGVPRTLMEASAMGRPIVATDVPGCRDVVADG
STGLLCAARDSASLAAQLARMLDMSAAERRAMGERGRRKIVAEFDEAKVVERYHQTISALTGITL

Sequences:

>Translated_385_residues
MISFQSDMSSASAPRIVLVCNTAWAIYTYRQGLLRMLIARGAQVTVLAPRDRTVEPLVRMGCRYAELPVASKGTSPREDL
RTLIALYRHYRAIRPDLVFHYTIKPNIYGSIAAWLARVPSIAVTTGLGYVFIQQSHAARVAKQLYRFALRFPREVWFLNR
DDLHTFTHEQLLAHPARARLLHGEGVDLEQFALAPLPARDTFTFVLIGRLLWDKGVREYVDAARMLRARYPHARFALLGP
VGVDNPSAISQADVDAWVREGVIDYLGEAHDVRPHIARADCVVLPSYREGVPRTLMEASAMGRPIVATDVPGCRDVVADG
STGLLCAARDSASLAAQLARMLDMSAAERRAMGERGRRKIVAEFDEAKVVERYHQTISALTGITL
>Mature_385_residues
MISFQSDMSSASAPRIVLVCNTAWAIYTYRQGLLRMLIARGAQVTVLAPRDRTVEPLVRMGCRYAELPVASKGTSPREDL
RTLIALYRHYRAIRPDLVFHYTIKPNIYGSIAAWLARVPSIAVTTGLGYVFIQQSHAARVAKQLYRFALRFPREVWFLNR
DDLHTFTHEQLLAHPARARLLHGEGVDLEQFALAPLPARDTFTFVLIGRLLWDKGVREYVDAARMLRARYPHARFALLGP
VGVDNPSAISQADVDAWVREGVIDYLGEAHDVRPHIARADCVVLPSYREGVPRTLMEASAMGRPIVATDVPGCRDVVADG
STGLLCAARDSASLAAQLARMLDMSAAERRAMGERGRRKIVAEFDEAKVVERYHQTISALTGITL

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42888; Mature: 42888

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFQSDMSSASAPRIVLVCNTAWAIYTYRQGLLRMLIARGAQVTVLAPRDRTVEPLVRM
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHC
GCRYAELPVASKGTSPREDLRTLIALYRHYRAIRPDLVFHYTIKPNIYGSIAAWLARVPS
CCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCC
IAVTTGLGYVFIQQSHAARVAKQLYRFALRFPREVWFLNRDDLHTFTHEQLLAHPARARL
CEEECCCCEEEEECHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHCHHHHHE
LHGEGVDLEQFALAPLPARDTFTFVLIGRLLWDKGVREYVDAARMLRARYPHARFALLGP
ECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
VGVDNPSAISQADVDAWVREGVIDYLGEAHDVRPHIARADCVVLPSYREGVPRTLMEASA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHCCCCHHHHHHHH
MGRPIVATDVPGCRDVVADGSTGLLCAARDSASLAAQLARMLDMSAAERRAMGERGRRKI
CCCCEEEECCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAEFDEAKVVERYHQTISALTGITL
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISFQSDMSSASAPRIVLVCNTAWAIYTYRQGLLRMLIARGAQVTVLAPRDRTVEPLVRM
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHC
GCRYAELPVASKGTSPREDLRTLIALYRHYRAIRPDLVFHYTIKPNIYGSIAAWLARVPS
CCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCC
IAVTTGLGYVFIQQSHAARVAKQLYRFALRFPREVWFLNRDDLHTFTHEQLLAHPARARL
CEEECCCCEEEEECHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHCHHHHHE
LHGEGVDLEQFALAPLPARDTFTFVLIGRLLWDKGVREYVDAARMLRARYPHARFALLGP
ECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
VGVDNPSAISQADVDAWVREGVIDYLGEAHDVRPHIARADCVVLPSYREGVPRTLMEASA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHHCCCCHHHHHHHH
MGRPIVATDVPGCRDVVADGSTGLLCAARDSASLAAQLARMLDMSAAERRAMGERGRRKI
CCCCEEEECCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAEFDEAKVVERYHQTISALTGITL
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]