| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451781
Identifier: 126451781
GI number: 126451781
Start: 3042052
End: 3042888
Strand: Direct
Name: 126451781
Synonym: BURPS1106A_3122
Alternate gene names: NA
Gene position: 3042052-3042888 (Clockwise)
Preceding gene: 126452894
Following gene: 126453504
Centisome position: 76.27
GC content: 69.41
Gene sequence:
>837_bases ATGACGCCCACTTTCGCCCCGCCCGGCGCCGCCCGCGCGCTCGACGACGTCGCCGTGCTGATCCCCGCCTACAACGCGCA CGACGATCTGCTGCGCACGCTGATGTCGCTGCGCGAGGACGTGCCGGTGCGCGTGCTCGTCGTCGACGACGGCAGCACGC CGCCCATCGCCGCGCCCGAATTGCCCGGGCTGTCGGTCGAGGTGCTGCGGATGCCGCAAAACGGCGGGATCGAGCGCGCG CTCGCGGCCGGCATCGACGCGCTCGCCGCGCGCGGCGTGCGCTACGCGGCGCGCATCGACGCGGGCGACCTCGCCGCGCC CGGCCGGCTCGCGAAGCAGCGTGCGTACTTCGACACGCATCCGAGCGTCGCGGGCCTCGGCACCTGGACGCAGGTCGTCT CGCGCGACGGCCGGCCGCTCTTCATGCTGACGCCGAGCGCCGATCCGGCGACGCTGCGCCGCACGCGCTTCCTGCGCTCG CCGTTCGTTCATCCTTCGATGATGCTCGACATCGCGGCGGTGAAGGAAGTCGGCAACTATCGGATCAAATATCGCGCGGC GGAAGACCTCGATCTTTTTTTACGGTTAATGGAACGCTACGATTGCGCGAACCTGCCGGAGCTCGGCTTGTATTACGAAT TGAACGAGGGCGGCATCAGCGCGACGAAGCGGCGGCGGCAGATCGCGTCGACGCTCGCGCTCGCGCTGCGCTACTTCGAT CCGCTCAATCCGTGCGATTGGCTCGGCGTCGCGAAAAACCTGCTGCATTTCGTCACGCCGTACTCGACGCTGCAGCGCGC GAAGCGCCTGCTGTTCGCGCGGCGCGGCGCGGCATGA
Upstream 100 bases:
>100_bases TTCCCGCGCTCGGCCTCTACGGCGCGCTCGCGGGCCTCGCCGCCGGCTATCTCGCCGCCGCGGCGGTCAATTTCCACTAC ATTCGCCTGAAGCTGCGCCC
Downstream 100 bases:
>100_bases CGCGCCCCGTCACGTTCGCGCGCATCCGATGATTTCTTTCCAGTCCGACATGAGTTCCGCTTCCGCCCCGCGCATCGTTC TCGTCTGCAATACCGCCTGG
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Group 2 Family Glycosyl Transferase; Glycosyltransferase A Protein; Glycosyl Transferase Domain-Containing Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTPTFAPPGAARALDDVAVLIPAYNAHDDLLRTLMSLREDVPVRVLVVDDGSTPPIAAPELPGLSVEVLRMPQNGGIERA LAAGIDALAARGVRYAARIDAGDLAAPGRLAKQRAYFDTHPSVAGLGTWTQVVSRDGRPLFMLTPSADPATLRRTRFLRS PFVHPSMMLDIAAVKEVGNYRIKYRAAEDLDLFLRLMERYDCANLPELGLYYELNEGGISATKRRRQIASTLALALRYFD PLNPCDWLGVAKNLLHFVTPYSTLQRAKRLLFARRGAA
Sequences:
>Translated_278_residues MTPTFAPPGAARALDDVAVLIPAYNAHDDLLRTLMSLREDVPVRVLVVDDGSTPPIAAPELPGLSVEVLRMPQNGGIERA LAAGIDALAARGVRYAARIDAGDLAAPGRLAKQRAYFDTHPSVAGLGTWTQVVSRDGRPLFMLTPSADPATLRRTRFLRS PFVHPSMMLDIAAVKEVGNYRIKYRAAEDLDLFLRLMERYDCANLPELGLYYELNEGGISATKRRRQIASTLALALRYFD PLNPCDWLGVAKNLLHFVTPYSTLQRAKRLLFARRGAA >Mature_277_residues TPTFAPPGAARALDDVAVLIPAYNAHDDLLRTLMSLREDVPVRVLVVDDGSTPPIAAPELPGLSVEVLRMPQNGGIERAL AAGIDALAARGVRYAARIDAGDLAAPGRLAKQRAYFDTHPSVAGLGTWTQVVSRDGRPLFMLTPSADPATLRRTRFLRSP FVHPSMMLDIAAVKEVGNYRIKYRAAEDLDLFLRLMERYDCANLPELGLYYELNEGGISATKRRRQIASTLALALRYFDP LNPCDWLGVAKNLLHFVTPYSTLQRAKRLLFARRGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30551; Mature: 30420
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTFAPPGAARALDDVAVLIPAYNAHDDLLRTLMSLREDVPVRVLVVDDGSTPPIAAPE CCCCCCCCCHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC LPGLSVEVLRMPQNGGIERALAAGIDALAARGVRYAARIDAGDLAAPGRLAKQRAYFDTH CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCC PSVAGLGTWTQVVSRDGRPLFMLTPSADPATLRRTRFLRSPFVHPSMMLDIAAVKEVGNY CCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCE RIKYRAAEDLDLFLRLMERYDCANLPELGLYYELNEGGISATKRRRQIASTLALALRYFD EEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC PLNPCDWLGVAKNLLHFVTPYSTLQRAKRLLFARRGAA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPTFAPPGAARALDDVAVLIPAYNAHDDLLRTLMSLREDVPVRVLVVDDGSTPPIAAPE CCCCCCCCHHHHHHCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC LPGLSVEVLRMPQNGGIERALAAGIDALAARGVRYAARIDAGDLAAPGRLAKQRAYFDTH CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCC PSVAGLGTWTQVVSRDGRPLFMLTPSADPATLRRTRFLRSPFVHPSMMLDIAAVKEVGNY CCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCE RIKYRAAEDLDLFLRLMERYDCANLPELGLYYELNEGGISATKRRRQIASTLALALRYFD EEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC PLNPCDWLGVAKNLLHFVTPYSTLQRAKRLLFARRGAA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA