| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is yeaD [C]
Identifier: 126453438
GI number: 126453438
Start: 1496632
End: 1497540
Strand: Reverse
Name: yeaD [C]
Synonym: BURPS1106A_1543
Alternate gene names: 126453438
Gene position: 1497540-1496632 (Counterclockwise)
Preceding gene: 126451995
Following gene: 126451856
Centisome position: 37.55
GC content: 69.75
Gene sequence:
>909_bases ATGCCCTCTTTCCAGAATCAGGACATCCTCGAGCTCATCGACGGCGCGTCGCGCGCGCGCATCGCGCCCGAAGCGGGCGG CCGGCTGCTGTCGTGGAGTATCGGCGACACGAGCATCGTCTTCTGGCCCGATGCCGCAGACTGGTCCAATCCCGCGAAGA TTCGCGGCGGCAATCCGCTGCTGTTTCCGTTTCTCGGCCGCCATCGGGTGGAGGGTCGAATCGGCTTCTGGCGCGACGGC GAAGGCGCCGTCCGCGAGCTGCCGATGCACGGCTTCGCACGCGATCTGCCGTTCCGCGCGCAAACGGACGCCGACGGCCG CGGCGTCACGCTGACGCTCGACAGCAGCGATCGCACGCGCGCCGGCTATCCGTTCGAATTCCGCTTCGCCGCGCGCTACC GGCTCGTCGACGGGCATACGCTCGACGTCACGCTATCCACGACCAATCTCGGCGACACGCCGCTGCCCCACTATGCGGGC CACCATTTCTATTTTGCGCTGCCGCACGTCGAGCGCGCGTCGGCCGTGCTCGAGCTGCCGCCGACGCATCGGCGCCGCCA GCTCGACGACGGCTCGATCAGCGCGCCCGAGCCGGGCGCGCCGCGCTACACGCTCGACGATCCGGCCATCGTCGACCGCT TCCATTGCCTCGACGGCATCCCCGCCGAACCGGTGCGCGTGCTGATGCCCGGCCGGCGGCATGCCATCGAGATCGACCTG AACCGCCCGGGCTCGGCGCCGTGGTACGCGGTGACGACGTGGACCGAGGCGCCCGGATCGGACTTCTATTGCGTCGAGCC ATGGCTCGGCCTGCCTGACGCGATCCACAACGGTCTCGGCCTGCAGCATGTCGCGCCGGGCACGACGCAAACCGCCGCGC TGCGCATCCGCGTGACGCCACTCGGTTGA
Upstream 100 bases:
>100_bases TCGCGCGGCAGTCACCTGCCGCACGAATGCGCACGCCCCGCGCCACGGCGATTCCGCTATCCTTGGCGGCCTATCTTGGA GAACGTCGACGCCTGCCACC
Downstream 100 bases:
>100_bases TGTCGATCGCCCCGCGCCGCTCGACCTAAGCCGCTCGACTGCCGCTGCAGCCGTGGGGCCGAAGCCCGCTGCCTGAGGCC ACCCGCCCGACATCGCGAAC
Product: aldose 1-epimerase family protein
Products: NA
Alternate protein names: Aldose 1-Epimerase Family Protein; Aldose 1-Epimerase Subfamily Protein; Galactose Mutarotase-Like Protein; Aldose 1-Epimerase Subfamily; Galactose Mutarotase; Aldose 1-Epimerase/Galactose Mutarotase; Aldose Epimerase Family Protein; Aldose Epimerase; Aldose Epimerase Or Galactose Mutarotase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPSFQNQDILELIDGASRARIAPEAGGRLLSWSIGDTSIVFWPDAADWSNPAKIRGGNPLLFPFLGRHRVEGRIGFWRDG EGAVRELPMHGFARDLPFRAQTDADGRGVTLTLDSSDRTRAGYPFEFRFAARYRLVDGHTLDVTLSTTNLGDTPLPHYAG HHFYFALPHVERASAVLELPPTHRRRQLDDGSISAPEPGAPRYTLDDPAIVDRFHCLDGIPAEPVRVLMPGRRHAIEIDL NRPGSAPWYAVTTWTEAPGSDFYCVEPWLGLPDAIHNGLGLQHVAPGTTQTAALRIRVTPLG
Sequences:
>Translated_302_residues MPSFQNQDILELIDGASRARIAPEAGGRLLSWSIGDTSIVFWPDAADWSNPAKIRGGNPLLFPFLGRHRVEGRIGFWRDG EGAVRELPMHGFARDLPFRAQTDADGRGVTLTLDSSDRTRAGYPFEFRFAARYRLVDGHTLDVTLSTTNLGDTPLPHYAG HHFYFALPHVERASAVLELPPTHRRRQLDDGSISAPEPGAPRYTLDDPAIVDRFHCLDGIPAEPVRVLMPGRRHAIEIDL NRPGSAPWYAVTTWTEAPGSDFYCVEPWLGLPDAIHNGLGLQHVAPGTTQTAALRIRVTPLG >Mature_301_residues PSFQNQDILELIDGASRARIAPEAGGRLLSWSIGDTSIVFWPDAADWSNPAKIRGGNPLLFPFLGRHRVEGRIGFWRDGE GAVRELPMHGFARDLPFRAQTDADGRGVTLTLDSSDRTRAGYPFEFRFAARYRLVDGHTLDVTLSTTNLGDTPLPHYAGH HFYFALPHVERASAVLELPPTHRRRQLDDGSISAPEPGAPRYTLDDPAIVDRFHCLDGIPAEPVRVLMPGRRHAIEIDLN RPGSAPWYAVTTWTEAPGSDFYCVEPWLGLPDAIHNGLGLQHVAPGTTQTAALRIRVTPLG
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081973, Length=251, Percent_Identity=24.3027888446215, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33319; Mature: 33188
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFQNQDILELIDGASRARIAPEAGGRLLSWSIGDTSIVFWPDAADWSNPAKIRGGNPL CCCCCCCCHHHHHCCCCCEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCEECCCCEE LFPFLGRHRVEGRIGFWRDGEGAVRELPMHGFARDLPFRAQTDADGRGVTLTLDSSDRTR EEECCCCEEECCCEEEEECCCCHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCC AGYPFEFRFAARYRLVDGHTLDVTLSTTNLGDTPLPHYAGHHFYFALPHVERASAVLELP CCCCEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEECC PTHRRRQLDDGSISAPEPGAPRYTLDDPAIVDRFHCLDGIPAEPVRVLMPGRRHAIEIDL CCHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEC NRPGSAPWYAVTTWTEAPGSDFYCVEPWLGLPDAIHNGLGLQHVAPGTTQTAALRIRVTP CCCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCCCEECCCCCCEEEEEEEEEE LG CC >Mature Secondary Structure PSFQNQDILELIDGASRARIAPEAGGRLLSWSIGDTSIVFWPDAADWSNPAKIRGGNPL CCCCCCCHHHHHCCCCCEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCEECCCCEE LFPFLGRHRVEGRIGFWRDGEGAVRELPMHGFARDLPFRAQTDADGRGVTLTLDSSDRTR EEECCCCEEECCCEEEEECCCCHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCC AGYPFEFRFAARYRLVDGHTLDVTLSTTNLGDTPLPHYAGHHFYFALPHVERASAVLELP CCCCEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEECC PTHRRRQLDDGSISAPEPGAPRYTLDDPAIVDRFHCLDGIPAEPVRVLMPGRRHAIEIDL CCHHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEC NRPGSAPWYAVTTWTEAPGSDFYCVEPWLGLPDAIHNGLGLQHVAPGTTQTAALRIRVTP CCCCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHCCCCCCEECCCCCCEEEEEEEEEE LG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA