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The map label for this gene is yhbV [H]

Identifier: 126453416

GI number: 126453416

Start: 2713315

End: 2714202

Strand: Reverse

Name: yhbV [H]

Synonym: BURPS1106A_2748

Alternate gene names: 126453416

Gene position: 2714202-2713315 (Counterclockwise)

Preceding gene: 126454060

Following gene: 126452207

Centisome position: 68.05

GC content: 67.12

Gene sequence:

>888_bases
ATGAAAATTGCTTTGGGGCCGGTACAGTACTACTGGCCGCGCGTCGCGACGATGCAGTTCTATCAGGCGATGTCGGAGAC
GCCCGTCGACATCGTGTATCTCGGCGAGACGGTTTGCTCGCGCCGGCACGAGCTGCGCTTCGCGGACTGGATCGAGATCG
CCGACATGCTCGTCGAGGCCGGCAAGGAAGTCGTGCTCTCGACGCAGGTGCTGCTCGAATCGGGCCGCGATCTGAAGACG
ATGCGCGAGATCGCCGAGAACGGCCGCTATCTGGTGGAGGCGAACGACATGGGCGCGGTACGCCGCAGCGCGTCGCGCGC
GTTCGTCGCGGGGCCGTGGCTGAACGTGTACAACCCGCCGACGCTCGCGATGCTCGCCGGGCTCGGCGCGCGGCGCTGGG
TGATGCCGCCCGAGATGAGCGAGGCGGGGCTCGCGCGGATGCAGGCCGAGCGGCCCGCGCACCTGGAAACCGAAGTGTTC
GCGTACGGGCGCATTCCGCTCGCGTTTTCCGCGCGCTGCTTCACCGCGCGCAATCGCAATTTTCCGAAGGACAACTGCCA
ATACGTGTGCATGGCGCATCCGGACGGCCTGCCGCTGCATACGCGCGAAGGCGAGCCGTTTCTCGTGCTCAACGGCATTT
CGACGCAGTCCGCGCGCGTCTACAACCTGATCGGCGAGATCGACGCGCTGCGTGCGCTGAACGTCGACGTCGTCCGGTTG
AGCCCGCAATCGCAACACATGATCGACGTGATCGACGCGTATCACGGCGTGCTGAGCGGCCGAACGGATGCGGGCGACGC
GCTCGCCGCGCTGCACGGCAGAATGCCCGAGGCGTCGTGCAACGGCTACTGGCACGGCAAGCCGGGCCTCGAGCGCGTCG
CGCGCTGA

Upstream 100 bases:

>100_bases
AACAAGGTCGCGGAAGGGCAGCAGCATACGCTCGGCGCCTACCACCGGCCGTGGAAATGACACGCACGACGGCGCACGCC
GGCATGCGGGAGCGAGGATC

Downstream 100 bases:

>100_bases
GGCCGCGGCGCGGCGTGCGCCGCGCCGCTTCGGACCCGTTGATGAGGAATCCCCGATGAATGCTCCAGTCTTTCAGCTGC
CGCCCACGCTCGGCAAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKIALGPVQYYWPRVATMQFYQAMSETPVDIVYLGETVCSRRHELRFADWIEIADMLVEAGKEVVLSTQVLLESGRDLKT
MREIAENGRYLVEANDMGAVRRSASRAFVAGPWLNVYNPPTLAMLAGLGARRWVMPPEMSEAGLARMQAERPAHLETEVF
AYGRIPLAFSARCFTARNRNFPKDNCQYVCMAHPDGLPLHTREGEPFLVLNGISTQSARVYNLIGEIDALRALNVDVVRL
SPQSQHMIDVIDAYHGVLSGRTDAGDALAALHGRMPEASCNGYWHGKPGLERVAR

Sequences:

>Translated_295_residues
MKIALGPVQYYWPRVATMQFYQAMSETPVDIVYLGETVCSRRHELRFADWIEIADMLVEAGKEVVLSTQVLLESGRDLKT
MREIAENGRYLVEANDMGAVRRSASRAFVAGPWLNVYNPPTLAMLAGLGARRWVMPPEMSEAGLARMQAERPAHLETEVF
AYGRIPLAFSARCFTARNRNFPKDNCQYVCMAHPDGLPLHTREGEPFLVLNGISTQSARVYNLIGEIDALRALNVDVVRL
SPQSQHMIDVIDAYHGVLSGRTDAGDALAALHGRMPEASCNGYWHGKPGLERVAR
>Mature_295_residues
MKIALGPVQYYWPRVATMQFYQAMSETPVDIVYLGETVCSRRHELRFADWIEIADMLVEAGKEVVLSTQVLLESGRDLKT
MREIAENGRYLVEANDMGAVRRSASRAFVAGPWLNVYNPPTLAMLAGLGARRWVMPPEMSEAGLARMQAERPAHLETEVF
AYGRIPLAFSARCFTARNRNFPKDNCQYVCMAHPDGLPLHTREGEPFLVLNGISTQSARVYNLIGEIDALRALNVDVVRL
SPQSQHMIDVIDAYHGVLSGRTDAGDALAALHGRMPEASCNGYWHGKPGLERVAR

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=298, Percent_Identity=41.6107382550336, Blast_Score=237, Evalue=7e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 32875; Mature: 32875

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIALGPVQYYWPRVATMQFYQAMSETPVDIVYLGETVCSRRHELRFADWIEIADMLVEA
CEEEECCHHHHCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHC
GKEVVLSTQVLLESGRDLKTMREIAENGRYLVEANDMGAVRRSASRAFVAGPWLNVYNPP
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHCCCEEEECCCCCCCCCH
TLAMLAGLGARRWVMPPEMSEAGLARMQAERPAHLETEVFAYGRIPLAFSARCFTARNRN
HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCEECCEEEECCCCC
FPKDNCQYVCMAHPDGLPLHTREGEPFLVLNGISTQSARVYNLIGEIDALRALNVDVVRL
CCCCCCEEEEEECCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEE
SPQSQHMIDVIDAYHGVLSGRTDAGDALAALHGRMPEASCNGYWHGKPGLERVAR
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCHHHHCC
>Mature Secondary Structure
MKIALGPVQYYWPRVATMQFYQAMSETPVDIVYLGETVCSRRHELRFADWIEIADMLVEA
CEEEECCHHHHCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHC
GKEVVLSTQVLLESGRDLKTMREIAENGRYLVEANDMGAVRRSASRAFVAGPWLNVYNPP
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHCCCEEEECCCCCCCCCH
TLAMLAGLGARRWVMPPEMSEAGLARMQAERPAHLETEVFAYGRIPLAFSARCFTARNRN
HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCEECCEEEECCCCC
FPKDNCQYVCMAHPDGLPLHTREGEPFLVLNGISTQSARVYNLIGEIDALRALNVDVVRL
CCCCCCEEEEEECCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEE
SPQSQHMIDVIDAYHGVLSGRTDAGDALAALHGRMPEASCNGYWHGKPGLERVAR
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]