| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453407
Identifier: 126453407
GI number: 126453407
Start: 405719
End: 406510
Strand: Direct
Name: 126453407
Synonym: BURPS1106A_0440
Alternate gene names: NA
Gene position: 405719-406510 (Clockwise)
Preceding gene: 126453469
Following gene: 126453357
Centisome position: 10.17
GC content: 74.49
Gene sequence:
>792_bases ATGACCGACCCCAACGGCTCCAATCCGTTTTCAGGCTTCGGCGGCTTTCAGCCCGCCGGCTTCCTCGACAAGATGTGGGA CATGATGCGTCTCACGCCGTTCGGCGCGATGAGCGCGTTGCCCGGCGCGTCGCAAGGGCTGCCGCCGTCGTTGTCGGCGA TGTCGGACCTGATGGCGCCGCTCGCGAGCGTCGAGGAGCTCGACAAGCGGATCACCGATCTGCGCGCGGTCGAGCAGTGG CTCAAGCTCAACCTCGGCATGCTGCAGTCCGCGATCCAGGCGCTCGAGGTGCAGCGCGCGACGCTTGCGACGCTGCGCGC GTTCGGCGCGCTCGCGCAGACGTCGATGGCCGCGGCCGAAGCCGCGCTGTCGCCCGACGATTCCGCGCCCCGCGAACCGG CTTCGGCTGCTGCTTCGGCTTCGGCGGCGAAGCGCGAGGCGAGCGCCGGCGAGCCGGCCGATGCGCAAGGCGCGCGCGAC GCCGACGGCGAGACGCCGCCGCCGGGCGCCGACGCGTTCGACCCGGCGGGCTGGTGGAATCTGCTGCAGTCGCAATTCAA TCAGCTTGCGCGTTTTGCGATGACGCAGCCGGGCATGGCGGCGGCGGGCGATGCGCCTGCGGCGGGCGCGGCGGCCGGGC CGAAGCCGTCCGCCGCGAAAAAGCCGGCGCCGCGCCGCGCCGCGGCCCCGCGCACGGGCGGCTCGGCGGCCGACCGCGCG CCGGGCGCGTCGAGCGCGGGCGGCGATGCGAAGCCCGCGGCCGCGAAGAAGCCGGCCAGGCGCGGCGCGTGA
Upstream 100 bases:
>100_bases CGCCGTCTTGAGCGCCGCGCGCGCTATGATCGATCATGAACGCCGCCGCGCGTGCGGCGTATCCCCACGACCTGCGTGAC TCGCTTCGAAGGAATCGACG
Downstream 100 bases:
>100_bases CGCGCGCGGCGCCGATGAGGATACGCTGAGGCGAAAATGCGGCTCGCGCTCGTGCTGATGGGAGGCGGCGCGCGCGCCGC GTATCAGGCCGGCGTGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTDPNGSNPFSGFGGFQPAGFLDKMWDMMRLTPFGAMSALPGASQGLPPSLSAMSDLMAPLASVEELDKRITDLRAVEQW LKLNLGMLQSAIQALEVQRATLATLRAFGALAQTSMAAAEAALSPDDSAPREPASAAASASAAKREASAGEPADAQGARD ADGETPPPGADAFDPAGWWNLLQSQFNQLARFAMTQPGMAAAGDAPAAGAAAGPKPSAAKKPAPRRAAAPRTGGSAADRA PGASSAGGDAKPAAAKKPARRGA
Sequences:
>Translated_263_residues MTDPNGSNPFSGFGGFQPAGFLDKMWDMMRLTPFGAMSALPGASQGLPPSLSAMSDLMAPLASVEELDKRITDLRAVEQW LKLNLGMLQSAIQALEVQRATLATLRAFGALAQTSMAAAEAALSPDDSAPREPASAAASASAAKREASAGEPADAQGARD ADGETPPPGADAFDPAGWWNLLQSQFNQLARFAMTQPGMAAAGDAPAAGAAAGPKPSAAKKPAPRRAAAPRTGGSAADRA PGASSAGGDAKPAAAKKPARRGA >Mature_262_residues TDPNGSNPFSGFGGFQPAGFLDKMWDMMRLTPFGAMSALPGASQGLPPSLSAMSDLMAPLASVEELDKRITDLRAVEQWL KLNLGMLQSAIQALEVQRATLATLRAFGALAQTSMAAAEAALSPDDSAPREPASAAASASAAKREASAGEPADAQGARDA DGETPPPGADAFDPAGWWNLLQSQFNQLARFAMTQPGMAAAGDAPAAGAAAGPKPSAAKKPAPRRAAAPRTGGSAADRAP GASSAGGDAKPAAAKKPARRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26477; Mature: 26346
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPNGSNPFSGFGGFQPAGFLDKMWDMMRLTPFGAMSALPGASQGLPPSLSAMSDLMAP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHH LASVEELDKRITDLRAVEQWLKLNLGMLQSAIQALEVQRATLATLRAFGALAQTSMAAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALSPDDSAPREPASAAASASAAKREASAGEPADAQGARDADGETPPPGADAFDPAGWWN HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LLQSQFNQLARFAMTQPGMAAAGDAPAAGAAAGPKPSAAKKPAPRRAAAPRTGGSAADRA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGASSAGGDAKPAAAKKPARRGA CCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure TDPNGSNPFSGFGGFQPAGFLDKMWDMMRLTPFGAMSALPGASQGLPPSLSAMSDLMAP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHH LASVEELDKRITDLRAVEQWLKLNLGMLQSAIQALEVQRATLATLRAFGALAQTSMAAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALSPDDSAPREPASAAASASAAKREASAGEPADAQGARDADGETPPPGADAFDPAGWWN HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LLQSQFNQLARFAMTQPGMAAAGDAPAAGAAAGPKPSAAKKPAPRRAAAPRTGGSAADRA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGASSAGGDAKPAAAKKPARRGA CCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA