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The map label for this gene is yraN [C]

Identifier: 126453291

GI number: 126453291

Start: 3808577

End: 3809011

Strand: Reverse

Name: yraN [C]

Synonym: BURPS1106A_3900

Alternate gene names: 126453291

Gene position: 3809011-3808577 (Counterclockwise)

Preceding gene: 126451953

Following gene: 126452382

Centisome position: 95.5

GC content: 74.48

Gene sequence:

>435_bases
TTGTGCCACGCGCGCGAGGCGAGCCCGGGAACGGGCGAACCCGAAGCCGCGCCGCGCGACAACTTTCCGAGGGCGGCCGG
GTCCAAGCGCGGGGTCGGCGCCGCGTTCGAGACGCGCGCGCAGCGCTTTCTCGAGCGCGCGGGACTCGCGCTCGTCGCGC
GCAACGTGACCGTGCGCGGCGGCGAGATCGACCTCGTGATGCGCGAGCGCGACGGCACGCTCGTGTTCGTCGAAGTGCGC
GCACGCGCGAACAGCCGCTACGGCGGAGCGGCGGCGAGCATCGGCGCGCGCAAGCGCATGCGGCTTCTTCTCGCGGCGCA
CGCGTTCTGGGCGCGCACGGGCGGCGCGAACGCGTGCCGCTTCGACGTCGTCGCGTTCGAAGGCAGCCGGCTCGTGTGGC
TGCGCGACGCGTTCCGTGCCGACGACGCGGGTTAG

Upstream 100 bases:

>100_bases
GAGGGCGCCTGCCGGATAGTGCTGCGCCTGCGCGAGATCGAGGAGGGAAGTCATGACACGAAAGGCGCCCGCACGCGGCG
CAAACGGAAGAAGCTCCGCA

Downstream 100 bases:

>100_bases
CCTGTGTCGAGATGTAAGGAGATGCGGCGACGCTCGGGCGGCGGGGGCGGAGTGCGGTAAACTCGCCGCACTCACGATGC
CGCGCGACGCAGACCACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MCHAREASPGTGEPEAAPRDNFPRAAGSKRGVGAAFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVR
ARANSRYGGAAASIGARKRMRLLLAAHAFWARTGGANACRFDVVAFEGSRLVWLRDAFRADDAG

Sequences:

>Translated_144_residues
MCHAREASPGTGEPEAAPRDNFPRAAGSKRGVGAAFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVR
ARANSRYGGAAASIGARKRMRLLLAAHAFWARTGGANACRFDVVAFEGSRLVWLRDAFRADDAG
>Mature_144_residues
MCHAREASPGTGEPEAAPRDNFPRAAGSKRGVGAAFETRAQRFLERAGLALVARNVTVRGGEIDLVMRERDGTLVFVEVR
ARANSRYGGAAASIGARKRMRLLLAAHAFWARTGGANACRFDVVAFEGSRLVWLRDAFRADDAG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=123, Percent_Identity=48.780487804878, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 15531; Mature: 15531

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCHAREASPGTGEPEAAPRDNFPRAAGSKRGVGAAFETRAQRFLERAGLALVARNVTVRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECEEEEC
GEIDLVMRERDGTLVFVEVRARANSRYGGAAASIGARKRMRLLLAAHAFWARTGGANACR
CEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
FDVVAFEGSRLVWLRDAFRADDAG
EEEEEECCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MCHAREASPGTGEPEAAPRDNFPRAAGSKRGVGAAFETRAQRFLERAGLALVARNVTVRG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECEEEEC
GEIDLVMRERDGTLVFVEVRARANSRYGGAAASIGARKRMRLLLAAHAFWARTGGANACR
CEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
FDVVAFEGSRLVWLRDAFRADDAG
EEEEEECCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA