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The map label for this gene is yycJ [H]

Identifier: 126453263

GI number: 126453263

Start: 2579138

End: 2579914

Strand: Reverse

Name: yycJ [H]

Synonym: BURPS1106A_2617

Alternate gene names: 126453263

Gene position: 2579914-2579138 (Counterclockwise)

Preceding gene: 126454691

Following gene: 126454144

Centisome position: 64.68

GC content: 70.27

Gene sequence:

>777_bases
GTGCGATTCGCGAGCCTCGGAAGCGGCAGCGAAGGCAATGCGCTCGTCGTCGAAGCATCGAACGGCGCGACGACGACACG
TGTGCTGCTCGATTGCGGTTTCTCGGCGAAGGAACTCGAACGCCGGCTCGCGCGCATCGATTTGCGCGTCGACGATCTCG
ACGCGATCCTCGTTACCCACGAACACGGCGATCATGTCGGCTGCGCGCTGACGCTCGCGCGTCGCGCGTCGCTGCCGCTG
TACACGAGCTGGGGCACCGCGCGCGCGGTCGGCGCGGACGAGGCCGACGTCGACCTCCATGTGCTCTGGAGCGACGAGAC
GGCCGCGGTGGGCGATCTGTGCGTGCTGCCCTATACCGTCCCGCACGATGCGCGCGAGCCGCTCCAGTTCGTCTTCAGCG
ACGGCGCGACGCGTCTCGGCGTGCTGACCGACGTCGGCATGTCGACGCCGCACATCGGCGCCGTGCTGAGCGGCTGCGAC
GGCTTGGTGCTGGAGGCCAACCACGATGTCGCGATGCTCGCGGCGAGCCGCTATCCGGCGTCGCTGAAGGCGCGCATCGG
CGGCTCGCACGGCCATCTGAGCAACGACGCGGCGGCGGCCATTCTCGCCGAGCTCGATCGCAGCCGGCTGCGGCACCTGG
TGGCTGCCCATCTGAGCCAGCAGAACAATGCGCCCGCGCTCGCGCAGGCGGCGCTCGCGGCGGCCCTGGGCGGGCAGGCG
GACGACGTGCTCGTCGCATCGCAGGACGACGGATTCGGCTGGCTCAGCCTGAGCTGA

Upstream 100 bases:

>100_bases
AAGACGCAAGTGGCCGTCATCGATGCAAACGGCCAGATCGACACCTCTTCCGATGCGCAGCGGATCATCTCGCTGCTGCA
CGCGCAGTTGAACTAAGCGC

Downstream 100 bases:

>100_bases
CACGCGACGGTGGCCGGCGCACGCGCGGTGCGGGCCGATTCGGGCAGGCGGGCGGGCGACGCGAGCCGGTTCGGCTGCTT
CGCCACCCTCTAGCGAGCCG

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRFASLGSGSEGNALVVEASNGATTTRVLLDCGFSAKELERRLARIDLRVDDLDAILVTHEHGDHVGCALTLARRASLPL
YTSWGTARAVGADEADVDLHVLWSDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGAVLSGCD
GLVLEANHDVAMLAASRYPASLKARIGGSHGHLSNDAAAAILAELDRSRLRHLVAAHLSQQNNAPALAQAALAAALGGQA
DDVLVASQDDGFGWLSLS

Sequences:

>Translated_258_residues
MRFASLGSGSEGNALVVEASNGATTTRVLLDCGFSAKELERRLARIDLRVDDLDAILVTHEHGDHVGCALTLARRASLPL
YTSWGTARAVGADEADVDLHVLWSDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGAVLSGCD
GLVLEANHDVAMLAASRYPASLKARIGGSHGHLSNDAAAAILAELDRSRLRHLVAAHLSQQNNAPALAQAALAAALGGQA
DDVLVASQDDGFGWLSLS
>Mature_258_residues
MRFASLGSGSEGNALVVEASNGATTTRVLLDCGFSAKELERRLARIDLRVDDLDAILVTHEHGDHVGCALTLARRASLPL
YTSWGTARAVGADEADVDLHVLWSDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGAVLSGCD
GLVLEANHDVAMLAASRYPASLKARIGGSHGHLSNDAAAAILAELDRSRLRHLVAAHLSQQNNAPALAQAALAAALGGQA
DDVLVASQDDGFGWLSLS

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 26915; Mature: 26915

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFASLGSGSEGNALVVEASNGATTTRVLLDCGFSAKELERRLARIDLRVDDLDAILVTH
CCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHCCEECCCEEEEEEE
EHGDHVGCALTLARRASLPLYTSWGTARAVGADEADVDLHVLWSDETAAVGDLCVLPYTV
CCCCCCHHEEEHHHHCCCCEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCEEEECEEC
PHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGAVLSGCDGLVLEANHDVAMLAASRYPA
CCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCCEEEECCCCEEEEEECCCCC
SLKARIGGSHGHLSNDAAAAILAELDRSRLRHLVAAHLSQQNNAPALAQAALAAALGGQA
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
DDVLVASQDDGFGWLSLS
CCEEEEECCCCCEEEEEC
>Mature Secondary Structure
MRFASLGSGSEGNALVVEASNGATTTRVLLDCGFSAKELERRLARIDLRVDDLDAILVTH
CCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHCCEECCCEEEEEEE
EHGDHVGCALTLARRASLPLYTSWGTARAVGADEADVDLHVLWSDETAAVGDLCVLPYTV
CCCCCCHHEEEHHHHCCCCEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCEEEECEEC
PHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGAVLSGCDGLVLEANHDVAMLAASRYPA
CCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCCEEEECCCCEEEEEECCCCC
SLKARIGGSHGHLSNDAAAAILAELDRSRLRHLVAAHLSQQNNAPALAQAALAAALGGQA
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
DDVLVASQDDGFGWLSLS
CCEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]