| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453213
Identifier: 126453213
GI number: 126453213
Start: 1419229
End: 1419936
Strand: Reverse
Name: 126453213
Synonym: BURPS1106A_1460
Alternate gene names: NA
Gene position: 1419936-1419229 (Counterclockwise)
Preceding gene: 126452605
Following gene: 126453204
Centisome position: 35.6
GC content: 75.42
Gene sequence:
>708_bases ATGACGTCCTTTGCGCTTCCTTCCCATATCGCGTTCGACGGCTACCGGCGGCTTGCGGCCGGGCCGTTGCCGACGGTCGC GCTCGCGGTCAAGCGGGCCATCGCCAACGACGCGATCGGCGGCGCGCTCCTGATCTTCGACAACGCGACCGGCCGCTCGA TCGACATCGACACGCGCGGCTCGGACGACGAAGTCGCCGCCCGCTACGCGCCGGCCGCTTCCGCGGACATCGCGCCCGGC GCAGCGGCCGGGGCGCACCGCGAGCGCGCCGCCGACCTCGCCGATGCCGCCGGCACCTCCAACGCCGCCGATGCCGACCC GCTCGCGCCCGAACCGCCGCGCGGCCGCGGCCGCCCGAAGCTCGGCGTCGTCGCGCGCGAGGTCACGCTGCTGCCGCGCC ATTGGGCGTGGCTCGCGACGCAGCCGGGCGGCGCGTCGGTCGCGCTGCGCCGCCTCGTCGACGAAGCGCGCCGCGCACAT GCGCACAAGGACCGAAGCCGGCGTGCGCAGGAACGTGCCTATCACTTCATGTCGGCGATCGCGGGCGACATGCCCGGCTT CGAGGAAGCGTCGCGCGCGCTCTTCGCGAACGACGCCGCGCGGCTGCGCGCCCAGATCGCCGGATGGCCGGCCGACGTGC GCGACCACGCGCTCGCGCTCGCGCTCGCGTCGCCGGATGACGGCGCGCCGTTGCCCGAGGTTCGCTGA
Upstream 100 bases:
>100_bases GGGCGGCGACGTCGAACGAAAAATATTACCCGGGTGTTATTGACGACTCATTTATACCCGGATATAAATATCGCATTGTT CCGATCCACGAGACCATGTG
Downstream 100 bases:
>100_bases CGCCCCGCCCCGAGACCTCCGATGACGACCATCGACCTGAACGCGGGCGCGCTGGCGCCCGTGGCCGACGAAATCGACGC CGTCGACCTGCGCGTGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MTSFALPSHIAFDGYRRLAAGPLPTVALAVKRAIANDAIGGALLIFDNATGRSIDIDTRGSDDEVAARYAPAASADIAPG AAAGAHRERAADLADAAGTSNAADADPLAPEPPRGRGRPKLGVVAREVTLLPRHWAWLATQPGGASVALRRLVDEARRAH AHKDRSRRAQERAYHFMSAIAGDMPGFEEASRALFANDAARLRAQIAGWPADVRDHALALALASPDDGAPLPEVR
Sequences:
>Translated_235_residues MTSFALPSHIAFDGYRRLAAGPLPTVALAVKRAIANDAIGGALLIFDNATGRSIDIDTRGSDDEVAARYAPAASADIAPG AAAGAHRERAADLADAAGTSNAADADPLAPEPPRGRGRPKLGVVAREVTLLPRHWAWLATQPGGASVALRRLVDEARRAH AHKDRSRRAQERAYHFMSAIAGDMPGFEEASRALFANDAARLRAQIAGWPADVRDHALALALASPDDGAPLPEVR >Mature_234_residues TSFALPSHIAFDGYRRLAAGPLPTVALAVKRAIANDAIGGALLIFDNATGRSIDIDTRGSDDEVAARYAPAASADIAPGA AAGAHRERAADLADAAGTSNAADADPLAPEPPRGRGRPKLGVVAREVTLLPRHWAWLATQPGGASVALRRLVDEARRAHA HKDRSRRAQERAYHFMSAIAGDMPGFEEASRALFANDAARLRAQIAGWPADVRDHALALALASPDDGAPLPEVR
Specific function: Unknown
COG id: COG3644
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24650; Mature: 24519
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFALPSHIAFDGYRRLAAGPLPTVALAVKRAIANDAIGGALLIFDNATGRSIDIDTRG CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCC SDDEVAARYAPAASADIAPGAAAGAHRERAADLADAAGTSNAADADPLAPEPPRGRGRPK CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC LGVVAREVTLLPRHWAWLATQPGGASVALRRLVDEARRAHAHKDRSRRAQERAYHFMSAI HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGDMPGFEEASRALFANDAARLRAQIAGWPADVRDHALALALASPDDGAPLPEVR HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TSFALPSHIAFDGYRRLAAGPLPTVALAVKRAIANDAIGGALLIFDNATGRSIDIDTRG CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCC SDDEVAARYAPAASADIAPGAAAGAHRERAADLADAAGTSNAADADPLAPEPPRGRGRPK CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC LGVVAREVTLLPRHWAWLATQPGGASVALRRLVDEARRAHAHKDRSRRAQERAYHFMSAI HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGDMPGFEEASRALFANDAARLRAQIAGWPADVRDHALALALASPDDGAPLPEVR HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA