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The map label for this gene is ctrB [H]

Identifier: 126453194

GI number: 126453194

Start: 3203886

End: 3205433

Strand: Reverse

Name: ctrB [H]

Synonym: BURPS1106A_3288

Alternate gene names: 126453194

Gene position: 3205433-3203886 (Counterclockwise)

Preceding gene: 126453256

Following gene: 126453307

Centisome position: 80.37

GC content: 56.59

Gene sequence:

>1548_bases
ATGAATGGCGTTGCATTCGCTGACTTCTTTTCTGGTAATGACTTGCCGATGCTGGAATCGGTCATTGCTGTTTCGAACCC
GCAAGCGGCGCTTGCCCGTGCCAGGGAGCGTTATTCCGATTGTTCGCCCGCGATAGATACGCCGACTGCTTTGGGATATG
TATTCAATTCGTGGCGTTTCCTGCTCGAAACCGGCGACGGTCAGGTGCGCCTGCGCATTCAATCGGAATTCGAGGGTACG
GACCTCGAGCATCGCCAACTCGTCTTGAGATATTTGCTGACCGATGCGCGCGCATCGTCCATTTCCGTCGACGAATTGCT
TCCCGCGTCATCGCCATACTCGGTGGACGCGGCGGAACTGGTTGATAATCCTTCGTCCGTCGTGTCGAAACGAGCCACCA
TGGAGAGCTTCGATGCTCCGGCGCAGGAGTCGTCATGGTTCTGGCGGGTATGGACGATCGGGCGGCTGAGGCTGACCCCG
TTGTTTCTGGTGACGGTGGTGCTGCCGACTGCAATCGCTACCCTCTACTACGGGCTGATTGCGTCGGATGTCTACATCTC
GGAATCGCAGTTTATCCTGCGTACGCCCAAGCGAACGAGCGAACCGGGTTTGGGGGCATTGCTTCAGGGCGTCTCCCTAT
CAAAGACCAGTGACGACACCAGTGTCGTTCAAGATTACATAAAGTCGAGAGACGCACTCGTCGTTCTCGAGCAGAAAATG
CCGCTCAGAGATGCATTTGGCGGTCGCTATGCTGATATCTTCAGTCGATTCCCGGGCGTGATCGGGCGCGATGGCTTCGA
GTATTTCTACCGCTATTTCAAAAACCATGTTGCCGTCGACGTAGGCACTGCAACTGCGGTCACTACGCTACGCGTTCAGG
CCTATACGTCGAAAGACGCATACCTGATCAACAAGTATTTGCTCGAGATGGCGGAGAAGCGAGTCAATGAACTCAACGAT
CGCTCACGTCAGGATTCGCTCCGTTACGCCCTTGCGGAGGTGGCGGGAGCGGAAGCGAAGGTAAAGGCTGCGTCGACGGC
GTTGTCGAAATTCCGAAGCAAGGCGAGTCTGTTCGATCCGGATCGGCAGTCCAATATCCAACTGGAACTGGTAGCGAAGT
TGCGGGGCGAGCTCATTGCCAAGCAGGCGCAGCTATCGCAATTGCGCATGCTCAGCCCGCAGAATCCGCAGATCCCGAGT
CTGGCCGCGTCTATCGGCGCGTTGGAAGCGTCGATTGCGAGCGAGAAAGGGGGCGTGGCGGGAGAGAAGAATTCGTTGTC
GGACCGTTCGGTCGAGTACCAGCGCCTGGCTTTGGAGCAATCGTTCGGGGAGAAGCTTCTTGCCTCTGCGCTGACATCGT
TGGAGCAAGCCAGGGCAGATGCGGAAAGAAAACAAATCTATCTGGAACGGGTTGCGGAACCGAACGAACCGGACGTGGCG
ATGGAACCCAAGCGTGTCCGGAACATCTTTGCCTGTTTCATTTTGGGGCTCGCGGCCTGGGGCGTGTTGAGCATGCTGGT
AGCGGGTATTCGTGAACATCAGGAATGA

Upstream 100 bases:

>100_bases
TCAGACAGTCAGGTACTGATGACGGTGCTGCAGGTGATGGGTGCCATTGCCGACGGTAAGGGCATGTGTTCGTTGTTTCG
GGTGGTAATCGAGTAACACT

Downstream 100 bases:

>100_bases
CGCGCCATGACAAATTTCGGTCGATCGTTGGCGGTTCAGCGAAGAGTGATATTCGCATTGCTGATGCGGGAAGTCCTGAC
CCGGTACGGGCGTCACAACA

Product: capsule polysaccharide exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MNGVAFADFFSGNDLPMLESVIAVSNPQAALARARERYSDCSPAIDTPTALGYVFNSWRFLLETGDGQVRLRIQSEFEGT
DLEHRQLVLRYLLTDARASSISVDELLPASSPYSVDAAELVDNPSSVVSKRATMESFDAPAQESSWFWRVWTIGRLRLTP
LFLVTVVLPTAIATLYYGLIASDVYISESQFILRTPKRTSEPGLGALLQGVSLSKTSDDTSVVQDYIKSRDALVVLEQKM
PLRDAFGGRYADIFSRFPGVIGRDGFEYFYRYFKNHVAVDVGTATAVTTLRVQAYTSKDAYLINKYLLEMAEKRVNELND
RSRQDSLRYALAEVAGAEAKVKAASTALSKFRSKASLFDPDRQSNIQLELVAKLRGELIAKQAQLSQLRMLSPQNPQIPS
LAASIGALEASIASEKGGVAGEKNSLSDRSVEYQRLALEQSFGEKLLASALTSLEQARADAERKQIYLERVAEPNEPDVA
MEPKRVRNIFACFILGLAAWGVLSMLVAGIREHQE

Sequences:

>Translated_515_residues
MNGVAFADFFSGNDLPMLESVIAVSNPQAALARARERYSDCSPAIDTPTALGYVFNSWRFLLETGDGQVRLRIQSEFEGT
DLEHRQLVLRYLLTDARASSISVDELLPASSPYSVDAAELVDNPSSVVSKRATMESFDAPAQESSWFWRVWTIGRLRLTP
LFLVTVVLPTAIATLYYGLIASDVYISESQFILRTPKRTSEPGLGALLQGVSLSKTSDDTSVVQDYIKSRDALVVLEQKM
PLRDAFGGRYADIFSRFPGVIGRDGFEYFYRYFKNHVAVDVGTATAVTTLRVQAYTSKDAYLINKYLLEMAEKRVNELND
RSRQDSLRYALAEVAGAEAKVKAASTALSKFRSKASLFDPDRQSNIQLELVAKLRGELIAKQAQLSQLRMLSPQNPQIPS
LAASIGALEASIASEKGGVAGEKNSLSDRSVEYQRLALEQSFGEKLLASALTSLEQARADAERKQIYLERVAEPNEPDVA
MEPKRVRNIFACFILGLAAWGVLSMLVAGIREHQE
>Mature_515_residues
MNGVAFADFFSGNDLPMLESVIAVSNPQAALARARERYSDCSPAIDTPTALGYVFNSWRFLLETGDGQVRLRIQSEFEGT
DLEHRQLVLRYLLTDARASSISVDELLPASSPYSVDAAELVDNPSSVVSKRATMESFDAPAQESSWFWRVWTIGRLRLTP
LFLVTVVLPTAIATLYYGLIASDVYISESQFILRTPKRTSEPGLGALLQGVSLSKTSDDTSVVQDYIKSRDALVVLEQKM
PLRDAFGGRYADIFSRFPGVIGRDGFEYFYRYFKNHVAVDVGTATAVTTLRVQAYTSKDAYLINKYLLEMAEKRVNELND
RSRQDSLRYALAEVAGAEAKVKAASTALSKFRSKASLFDPDRQSNIQLELVAKLRGELIAKQAQLSQLRMLSPQNPQIPS
LAASIGALEASIASEKGGVAGEKNSLSDRSVEYQRLALEQSFGEKLLASALTSLEQARADAERKQIYLERVAEPNEPDVA
MEPKRVRNIFACFILGLAAWGVLSMLVAGIREHQE

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrC and CtrD proteins [H]

COG id: COG3524

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexC/CtrB/KpsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005705
- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 56898; Mature: 56898

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGVAFADFFSGNDLPMLESVIAVSNPQAALARARERYSDCSPAIDTPTALGYVFNSWRF
CCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEE
LLETGDGQVRLRIQSEFEGTDLEHRQLVLRYLLTDARASSISVDELLPASSPYSVDAAEL
EEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHH
VDNPSSVVSKRATMESFDAPAQESSWFWRVWTIGRLRLTPLFLVTVVLPTAIATLYYGLI
HCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
ASDVYISESQFILRTPKRTSEPGLGALLQGVSLSKTSDDTSVVQDYIKSRDALVVLEQKM
HHHEEECCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
PLRDAFGGRYADIFSRFPGVIGRDGFEYFYRYFKNHVAVDVGTATAVTTLRVQAYTSKDA
CHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCHHEEEEEEEEEECCCCH
YLINKYLLEMAEKRVNELNDRSRQDSLRYALAEVAGAEAKVKAASTALSKFRSKASLFDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
DRQSNIQLELVAKLRGELIAKQAQLSQLRMLSPQNPQIPSLAASIGALEASIASEKGGVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
GEKNSLSDRSVEYQRLALEQSFGEKLLASALTSLEQARADAERKQIYLERVAEPNEPDVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
MEPKRVRNIFACFILGLAAWGVLSMLVAGIREHQE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNGVAFADFFSGNDLPMLESVIAVSNPQAALARARERYSDCSPAIDTPTALGYVFNSWRF
CCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEE
LLETGDGQVRLRIQSEFEGTDLEHRQLVLRYLLTDARASSISVDELLPASSPYSVDAAEL
EEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHH
VDNPSSVVSKRATMESFDAPAQESSWFWRVWTIGRLRLTPLFLVTVVLPTAIATLYYGLI
HCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
ASDVYISESQFILRTPKRTSEPGLGALLQGVSLSKTSDDTSVVQDYIKSRDALVVLEQKM
HHHEEECCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
PLRDAFGGRYADIFSRFPGVIGRDGFEYFYRYFKNHVAVDVGTATAVTTLRVQAYTSKDA
CHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCHHEEEEEEEEEECCCCH
YLINKYLLEMAEKRVNELNDRSRQDSLRYALAEVAGAEAKVKAASTALSKFRSKASLFDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
DRQSNIQLELVAKLRGELIAKQAQLSQLRMLSPQNPQIPSLAASIGALEASIASEKGGVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
GEKNSLSDRSVEYQRLALEQSFGEKLLASALTSLEQARADAERKQIYLERVAEPNEPDVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
MEPKRVRNIFACFILGLAAWGVLSMLVAGIREHQE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]