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The map label for this gene is 126453143

Identifier: 126453143

GI number: 126453143

Start: 3878819

End: 3880471

Strand: Reverse

Name: 126453143

Synonym: BURPS1106A_3978

Alternate gene names: NA

Gene position: 3880471-3878819 (Counterclockwise)

Preceding gene: 126454236

Following gene: 126453794

Centisome position: 97.29

GC content: 66.0

Gene sequence:

>1653_bases
GTGTACGTCGACGGTGCCGATCCCCGTCATTCGACGCTTCAAAAGGGCTTCAACCTGCGCTGGCCGCCGACGGCCGAGGC
CGGCGCGGCGGCGATCTATGTCTGCCGCACGGCGGACGACGTGATCGCGGCGTCGCGCGACGCGCTCGCGAAAGGTTGCC
GGATCACGGTGCGCAGCGGCGGGCACTGCTATGAGGGGTTCGTCGCGAACCGGCTGCCGGACGACCACGGGCGGCCGCTC
GCGATCATCGATCTCGGCCTGATGTCGGGGTTCGATATCGATGATCGCGGGCAGATCGCGTCGCCGTTCGATGCGGCGGG
CGCGCCGCGCTATCGGGTTCGCGTCGCGGCGGGCCGCCAGAACTGGGACGGCTATGTCGGCCTGTACAAGACCATGGGCA
AGACGCTGCCCGGTGGCTCGTGCTATTCGGTCGGCGCAGGCGGCCATATCGTCGGCGGCGGGTATGGGCTGCTCTCGCGT
CTGCATGGGCTGACGGTCGACTGGCTGACGGGCGTCGATATCCTCGCGCCCGCCGCCGGCGGCGCGCTCGGCGCGAAGCA
CGTGCATTCCGGCAGCACCGATCCGGCGGATCGGGCGCTCTTCATCGCATGTCGCGGCGGGGGCGGCGGCAACTTCGGCG
TGATCCTGAACTACTACTTCAACGCGCTTCCCAACGCGCCGCGTACCGCGTATTGGCTGACGCTCGCGTATGACTGGTCG
CACTTCACGCAAGCGAGCTTCGGCCGTTTCCTCCAAACCTACTGGGATTGGTTCAGCCGCAACGACGCGAACTGGAACGC
CGCGGACCCGGCGCTCGCCAATGGCGGGTTGTTCACGCTTCTGAAACTGCAGCATCGCTCGGCCGGGCCGATCGTGCTCG
CGATCCAGTACACGGGCAAGGATGGAACGGTGGGCGGCCCGGAGGATGCGCCGTTCATCGATTTCGTCGACACGATGAAT
GCGGCGGCGAATCGTCTGCCCGTCGTCTGGGACCGGTTCGTCGCGCCGAATCTGCCGGCGCTCGGCCACCCGCTGGCCGG
CCTGCGCATCGCGCACGCGGCGCGGAGCGCATTGAAGATGGACTGGCTGTATCTGACGCAGACGATCAACACGTCGGGCG
CGAACCGGCGCGGCAAGTACAAGTCCGCCTATCAGATCGGCAATTTCGGCGAGACCGAGGTCGACGCGCTGTGGCGATAT
CTGAACGGCGCGGACGATCCGCGCCTGAGCCAGACGCTCGTGCAGATCGATTCGTACGGCGGCTGCGTAAACGCGAACGA
CGAAAGCGCGAATCCGACGTCGGTCTATCAGCGCCGTTCGCTGCTGAAATCGCAGTACCAAACCTACTGGACGAATCCCG
CCGACGACGCCTTCCACGTCGAATGGCTGCACGATCTGTTCTCCGCGGTGCACGCGGATCAGGGCGGCAAGCCGTACCGC
GACGCGAGCGGCCGCTACGAAGGCTGCTACATCAACTATCCGGACATCGACATGAAGTATCTCGGCAGCGATCCGGCGCA
GATCGATCCGAGGTGGCTCGATCTGTACTACGGCGAGAAGGCCGCATCGCTGATCGCGACGAAGCGCTCGGTCGATCCGT
CGAATCTGTTCATGCACGAGATGTCGATTCCGCTGACGCCGCCGCTTGGTTGA

Upstream 100 bases:

>100_bases
GATCGTCGCGCCGCTTGTACGATGCGGGCGCGCCGCGCCGCGCGGTTGTTCCCCCCGGCTGCGAAGCATGTGGCCTTCGC
GGGAGGTTCCGATGTCCTAT

Downstream 100 bases:

>100_bases
CCTCAATCGTGGAGCGTTGCCGGGCGCGTGCGTTCGGCGGCGCGACGCTCGCCTCAGGCACGGTTCGCGCGGCCGCCCGC
TTGGGCGGCCGCGCCCGTCT

Product: FAD/FMN-containing dehydrogenases

Products: NA

Alternate protein names: Secreted FAD-Linked Oxidase; Berberine/Berberine Domain Protein; Berberine/Berberine Domain-Containing Protein; Dehydrogenase; FAD Linked Oxidase Domain-Containing Protein; Hexose Oxidase; FAD/FMN-Dependent Dehydrogenase; FAD/FMN-Containing Dehydrogenase; Fad Linked Oxidase Oxidoreductase Protein

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MYVDGADPRHSTLQKGFNLRWPPTAEAGAAAIYVCRTADDVIAASRDALAKGCRITVRSGGHCYEGFVANRLPDDHGRPL
AIIDLGLMSGFDIDDRGQIASPFDAAGAPRYRVRVAAGRQNWDGYVGLYKTMGKTLPGGSCYSVGAGGHIVGGGYGLLSR
LHGLTVDWLTGVDILAPAAGGALGAKHVHSGSTDPADRALFIACRGGGGGNFGVILNYYFNALPNAPRTAYWLTLAYDWS
HFTQASFGRFLQTYWDWFSRNDANWNAADPALANGGLFTLLKLQHRSAGPIVLAIQYTGKDGTVGGPEDAPFIDFVDTMN
AAANRLPVVWDRFVAPNLPALGHPLAGLRIAHAARSALKMDWLYLTQTINTSGANRRGKYKSAYQIGNFGETEVDALWRY
LNGADDPRLSQTLVQIDSYGGCVNANDESANPTSVYQRRSLLKSQYQTYWTNPADDAFHVEWLHDLFSAVHADQGGKPYR
DASGRYEGCYINYPDIDMKYLGSDPAQIDPRWLDLYYGEKAASLIATKRSVDPSNLFMHEMSIPLTPPLG

Sequences:

>Translated_550_residues
MYVDGADPRHSTLQKGFNLRWPPTAEAGAAAIYVCRTADDVIAASRDALAKGCRITVRSGGHCYEGFVANRLPDDHGRPL
AIIDLGLMSGFDIDDRGQIASPFDAAGAPRYRVRVAAGRQNWDGYVGLYKTMGKTLPGGSCYSVGAGGHIVGGGYGLLSR
LHGLTVDWLTGVDILAPAAGGALGAKHVHSGSTDPADRALFIACRGGGGGNFGVILNYYFNALPNAPRTAYWLTLAYDWS
HFTQASFGRFLQTYWDWFSRNDANWNAADPALANGGLFTLLKLQHRSAGPIVLAIQYTGKDGTVGGPEDAPFIDFVDTMN
AAANRLPVVWDRFVAPNLPALGHPLAGLRIAHAARSALKMDWLYLTQTINTSGANRRGKYKSAYQIGNFGETEVDALWRY
LNGADDPRLSQTLVQIDSYGGCVNANDESANPTSVYQRRSLLKSQYQTYWTNPADDAFHVEWLHDLFSAVHADQGGKPYR
DASGRYEGCYINYPDIDMKYLGSDPAQIDPRWLDLYYGEKAASLIATKRSVDPSNLFMHEMSIPLTPPLG
>Mature_550_residues
MYVDGADPRHSTLQKGFNLRWPPTAEAGAAAIYVCRTADDVIAASRDALAKGCRITVRSGGHCYEGFVANRLPDDHGRPL
AIIDLGLMSGFDIDDRGQIASPFDAAGAPRYRVRVAAGRQNWDGYVGLYKTMGKTLPGGSCYSVGAGGHIVGGGYGLLSR
LHGLTVDWLTGVDILAPAAGGALGAKHVHSGSTDPADRALFIACRGGGGGNFGVILNYYFNALPNAPRTAYWLTLAYDWS
HFTQASFGRFLQTYWDWFSRNDANWNAADPALANGGLFTLLKLQHRSAGPIVLAIQYTGKDGTVGGPEDAPFIDFVDTMN
AAANRLPVVWDRFVAPNLPALGHPLAGLRIAHAARSALKMDWLYLTQTINTSGANRRGKYKSAYQIGNFGETEVDALWRY
LNGADDPRLSQTLVQIDSYGGCVNANDESANPTSVYQRRSLLKSQYQTYWTNPADDAFHVEWLHDLFSAVHADQGGKPYR
DASGRYEGCYINYPDIDMKYLGSDPAQIDPRWLDLYYGEKAASLIATKRSVDPSNLFMHEMSIPLTPPLG

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59819; Mature: 59819

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVDGADPRHSTLQKGFNLRWPPTAEAGAAAIYVCRTADDVIAASRDALAKGCRITVRSG
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCHHHHHCCCEEEEECC
GHCYEGFVANRLPDDHGRPLAIIDLGLMSGFDIDDRGQIASPFDAAGAPRYRVRVAAGRQ
CCEECCHHHHCCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
NWDGYVGLYKTMGKTLPGGSCYSVGAGGHIVGGGYGLLSRLHGLTVDWLTGVDILAPAAG
CCCCHHHHHHHHCCCCCCCCEEEECCCCEEECCHHHHHHHHHCCEEHHHCCCHHCCCCCC
GALGAKHVHSGSTDPADRALFIACRGGGGGNFGVILNYYFNALPNAPRTAYWLTLAYDWS
CCCCHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHEEHHHHCCCCCCEEEEEEEEECCH
HFTQASFGRFLQTYWDWFSRNDANWNAADPALANGGLFTLLKLQHRSAGPIVLAIQYTGK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCC
DGTVGGPEDAPFIDFVDTMNAAANRLPVVWDRFVAPNLPALGHPLAGLRIAHAARSALKM
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
DWLYLTQTINTSGANRRGKYKSAYQIGNFGETEVDALWRYLNGADDPRLSQTLVQIDSYG
EEEEEEEEECCCCCCCCCCCCHHEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
GCVNANDESANPTSVYQRRSLLKSQYQTYWTNPADDAFHVEWLHDLFSAVHADQGGKPYR
CEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
DASGRYEGCYINYPDIDMKYLGSDPAQIDPRWLDLYYGEKAASLIATKRSVDPSNLFMHE
CCCCCCCCEEEECCCCCCEECCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCHHHEEEEE
MSIPLTPPLG
CCCCCCCCCC
>Mature Secondary Structure
MYVDGADPRHSTLQKGFNLRWPPTAEAGAAAIYVCRTADDVIAASRDALAKGCRITVRSG
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHCHHHHHCCCEEEEECC
GHCYEGFVANRLPDDHGRPLAIIDLGLMSGFDIDDRGQIASPFDAAGAPRYRVRVAAGRQ
CCEECCHHHHCCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
NWDGYVGLYKTMGKTLPGGSCYSVGAGGHIVGGGYGLLSRLHGLTVDWLTGVDILAPAAG
CCCCHHHHHHHHCCCCCCCCEEEECCCCEEECCHHHHHHHHHCCEEHHHCCCHHCCCCCC
GALGAKHVHSGSTDPADRALFIACRGGGGGNFGVILNYYFNALPNAPRTAYWLTLAYDWS
CCCCHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHEEHHHHCCCCCCEEEEEEEEECCH
HFTQASFGRFLQTYWDWFSRNDANWNAADPALANGGLFTLLKLQHRSAGPIVLAIQYTGK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCC
DGTVGGPEDAPFIDFVDTMNAAANRLPVVWDRFVAPNLPALGHPLAGLRIAHAARSALKM
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
DWLYLTQTINTSGANRRGKYKSAYQIGNFGETEVDALWRYLNGADDPRLSQTLVQIDSYG
EEEEEEEEECCCCCCCCCCCCHHEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
GCVNANDESANPTSVYQRRSLLKSQYQTYWTNPADDAFHVEWLHDLFSAVHADQGGKPYR
CEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
DASGRYEGCYINYPDIDMKYLGSDPAQIDPRWLDLYYGEKAASLIATKRSVDPSNLFMHE
CCCCCCCCEEEECCCCCCEECCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCHHHEEEEE
MSIPLTPPLG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA