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The map label for this gene is nodN [H]

Identifier: 126453094

GI number: 126453094

Start: 1290277

End: 1290759

Strand: Direct

Name: nodN [H]

Synonym: BURPS1106A_1319

Alternate gene names: 126453094

Gene position: 1290277-1290759 (Clockwise)

Preceding gene: 126454967

Following gene: 126451974

Centisome position: 32.35

GC content: 68.94

Gene sequence:

>483_bases
ATGACGGCGCGCGTGCACGCGCTGCCGGTCGTCGCGTCGGCCGACGCGCTGCATGCGCGGGTCGGCGCGGCGCCGTTCGC
GAGCGGTTGGATCGACATCGATCAGACGCGCGTCGACCGGTTCGCCGACGCAACGGGCGATCATCAATGGATTCATGTCG
ATCCCGAGCGCGCCGCACGCGAATCGCCGTTCGGCGGGCCGATCGCGCACGGTTTCCTCACGCTGTCGCTGATTCCGGCG
TTGATGACCGATGCGCTGCGCTTCGAACAGCGCATGGGCGTGAACTACGGTTTGAATCGCGTGCGTTTCCTGAAGCCGGT
GCCGGTCGGCTCGCGCGTGCGCGCGCTTTTCGCGGTGAAGGGAACGGGGCCGGCGAAGCAGGGCGGCGTGCAGGCGACCT
GGGCGGTGTCGGTGGAGGTCGAACTCGGCGGCCGGCCGGTGCCGGCCTGCGCGGCCGAGTTCATCACGCTGCATTATTTC
TGA

Upstream 100 bases:

>100_bases
TCGTGACGACCGAATGGGAAGGGGTCGACGAGCAGGGCGAGACCGTCATCACCGTGCGCTCGAAAGTGATCTTCGGGCTG
CGCTCGCCGCAGGTGCGTGC

Downstream 100 bases:

>100_bases
GCGGGTTCGCGCGCGATGCGTATGTGCGCCGGCGCACATACGCGCGAGCTTTCGAACACTTATCGTGCCCTTACAACGAC
CGAAAGGGGACGATGATGAA

Product: MaoC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTARVHALPVVASADALHARVGAAPFASGWIDIDQTRVDRFADATGDHQWIHVDPERAARESPFGGPIAHGFLTLSLIPA
LMTDALRFEQRMGVNYGLNRVRFLKPVPVGSRVRALFAVKGTGPAKQGGVQATWAVSVEVELGGRPVPACAAEFITLHYF

Sequences:

>Translated_160_residues
MTARVHALPVVASADALHARVGAAPFASGWIDIDQTRVDRFADATGDHQWIHVDPERAARESPFGGPIAHGFLTLSLIPA
LMTDALRFEQRMGVNYGLNRVRFLKPVPVGSRVRALFAVKGTGPAKQGGVQATWAVSVEVELGGRPVPACAAEFITLHYF
>Mature_159_residues
TARVHALPVVASADALHARVGAAPFASGWIDIDQTRVDRFADATGDHQWIHVDPERAARESPFGGPIAHGFLTLSLIPAL
MTDALRFEQRMGVNYGLNRVRFLKPVPVGSRVRALFAVKGTGPAKQGGVQATWAVSVEVELGGRPVPACAAEFITLHYF

Specific function: Involved in the production of the root hair deformation (HAD) factor specifically on medicago [H]

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the R.meliloti counterpart [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 17210; Mature: 17079

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARVHALPVVASADALHARVGAAPFASGWIDIDQTRVDRFADATGDHQWIHVDPERAAR
CCCEEEEEEEEECCHHHHHHCCCCCCCCCCEECCHHHHHHHHCCCCCCEEEEECHHHHHC
ESPFGGPIAHGFLTLSLIPALMTDALRFEQRMGVNYGLNRVRFLKPVPVGSRVRALFAVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEE
GTGPAKQGGVQATWAVSVEVELGGRPVPACAAEFITLHYF
CCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHEEEECC
>Mature Secondary Structure 
TARVHALPVVASADALHARVGAAPFASGWIDIDQTRVDRFADATGDHQWIHVDPERAAR
CCEEEEEEEEECCHHHHHHCCCCCCCCCCEECCHHHHHHHHCCCCCCEEEEECHHHHHC
ESPFGGPIAHGFLTLSLIPALMTDALRFEQRMGVNYGLNRVRFLKPVPVGSRVRALFAVK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEEEE
GTGPAKQGGVQATWAVSVEVELGGRPVPACAAEFITLHYF
CCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3132583 [H]