Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126451974

Identifier: 126451974

GI number: 126451974

Start: 1290852

End: 1292114

Strand: Direct

Name: 126451974

Synonym: BURPS1106A_1320

Alternate gene names: NA

Gene position: 1290852-1292114 (Clockwise)

Preceding gene: 126453094

Following gene: 126451899

Centisome position: 32.36

GC content: 68.88

Gene sequence:

>1263_bases
ATGATGAACCGATCACAGCAGACATTCGCCGGATTCGCCGCCGCGTGCGCGTTCGCCGCCGGCAGCGCGGCGCAGGGGTG
GGCCGCGCCCGCCGACGCCATCGTCTATCCCGCGGGCAACGGCAGCGATCAGGCCGACGCGCTGCAGGCGGCGCTCGATG
CGTTGCAGACCGGCCAGCGGCTCGTGCTTGCGCCGGGGCAGTATGTCGTCGGGCGTTCGCTGCTCGTGAAGAATGCGCAG
GTCGTGGTATCCGGCTACGGCGCGACGCTTGTCGCGACGAACGATGCCGATCAGACCATCGAGATGCGCGGCCGGGATTC
GACGCTCGTCGGCGTCACGCTGGTCGGCACGGGCGCGACGCGGCTCACGACGCCGGAATCGACGAAGGTGGACGTGACGG
GTGCGGGCGTTCAGGTGCTCGACGTCGAGGTGCGCGGTGGCGCGAGCGCTGGCATTTTCGTGTTCGGCGGCACGGACGTC
GCCGTCGTCGGCAACACGGTGCGGGACACGCTGGCCGACGGCATCCATACGACGTACGGCTCGCGCAACGTGCTGGTGCG
CGACAACACGGTGCAGAACACCGGCGACGACATGGTCGCGGTCGTCAGTTACAAGGGGGACGGCAAGCTCAGCAGCAACG
TGCTGATTCAGAACAACACGCTGCTCGGCAACTACTGGGGGCGCGGCGCGACCGTGGTCGGTGGCGCGGACGTGACGATC
ACCGGCAACACGGTACGGAACGTGCAGAAGGCGGCCGGCATTCTCGTGGGGCAGGAAGACCCCGCGAACACCTACGATGC
GCGAAACGTCATCGTGTCGAACAATACGATTTCGGACATCGAATGGCCCGATCCGGACAACACGCGCCCGCCGGCCTACA
TGGCCGCGATCGACGTCAACACCTGGTCGGGCAAGGCGACCTCCGTGTCGGTGACCGATAACCGGATTTCCCGGGCCCGG
TATGCGGGCGTGCGGGCGCTCGGCAATGTCTGCCAACTGCGCGTGTCGCGCAACGCGCTCGCGTCGATCGACGGCACGCC
GATCGCGTTGCAACAGGCGCCGAGCTGCGCGGCGGGCCAGATCGTGTGCGCATCGAATACGCTGGACGGCGCCGCGCTCG
CGTCGCCGGCAGGCTGCTCGGCGACGGACGGCCTGACGATCACCGGGGCGAACGTCGCGCGCATGCCGCAGGTGCGAGCG
TATTTGCGGCAAACGGCGGCGCCGTCCGCGGCGAAGGCGGGCACCGCCGCGTCGGGCGAATGA

Upstream 100 bases:

>100_bases
ATTTCTGAGCGGGTTCGCGCGCGATGCGTATGTGCGCCGGCGCACATACGCGCGAGCTTTCGAACACTTATCGTGCCCTT
ACAACGACCGAAAGGGGACG

Downstream 100 bases:

>100_bases
GCGGCCGGCCGCCGGGCATCGCGCGCCGGCGTTGGGCGGCACGCGGCACGCGGCATGTGGCGCGGCGGGCGGCCGGTGTC
CGCGCTCGCGCGTTTGGCGG

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MMNRSQQTFAGFAAACAFAAGSAAQGWAAPADAIVYPAGNGSDQADALQAALDALQTGQRLVLAPGQYVVGRSLLVKNAQ
VVVSGYGATLVATNDADQTIEMRGRDSTLVGVTLVGTGATRLTTPESTKVDVTGAGVQVLDVEVRGGASAGIFVFGGTDV
AVVGNTVRDTLADGIHTTYGSRNVLVRDNTVQNTGDDMVAVVSYKGDGKLSSNVLIQNNTLLGNYWGRGATVVGGADVTI
TGNTVRNVQKAAGILVGQEDPANTYDARNVIVSNNTISDIEWPDPDNTRPPAYMAAIDVNTWSGKATSVSVTDNRISRAR
YAGVRALGNVCQLRVSRNALASIDGTPIALQQAPSCAAGQIVCASNTLDGAALASPAGCSATDGLTITGANVARMPQVRA
YLRQTAAPSAAKAGTAASGE

Sequences:

>Translated_420_residues
MMNRSQQTFAGFAAACAFAAGSAAQGWAAPADAIVYPAGNGSDQADALQAALDALQTGQRLVLAPGQYVVGRSLLVKNAQ
VVVSGYGATLVATNDADQTIEMRGRDSTLVGVTLVGTGATRLTTPESTKVDVTGAGVQVLDVEVRGGASAGIFVFGGTDV
AVVGNTVRDTLADGIHTTYGSRNVLVRDNTVQNTGDDMVAVVSYKGDGKLSSNVLIQNNTLLGNYWGRGATVVGGADVTI
TGNTVRNVQKAAGILVGQEDPANTYDARNVIVSNNTISDIEWPDPDNTRPPAYMAAIDVNTWSGKATSVSVTDNRISRAR
YAGVRALGNVCQLRVSRNALASIDGTPIALQQAPSCAAGQIVCASNTLDGAALASPAGCSATDGLTITGANVARMPQVRA
YLRQTAAPSAAKAGTAASGE
>Mature_420_residues
MMNRSQQTFAGFAAACAFAAGSAAQGWAAPADAIVYPAGNGSDQADALQAALDALQTGQRLVLAPGQYVVGRSLLVKNAQ
VVVSGYGATLVATNDADQTIEMRGRDSTLVGVTLVGTGATRLTTPESTKVDVTGAGVQVLDVEVRGGASAGIFVFGGTDV
AVVGNTVRDTLADGIHTTYGSRNVLVRDNTVQNTGDDMVAVVSYKGDGKLSSNVLIQNNTLLGNYWGRGATVVGGADVTI
TGNTVRNVQKAAGILVGQEDPANTYDARNVIVSNNTISDIEWPDPDNTRPPAYMAAIDVNTWSGKATSVSVTDNRISRAR
YAGVRALGNVCQLRVSRNALASIDGTPIALQQAPSCAAGQIVCASNTLDGAALASPAGCSATDGLTITGANVARMPQVRA
YLRQTAAPSAAKAGTAASGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42792; Mature: 42792

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRSQQTFAGFAAACAFAAGSAAQGWAAPADAIVYPAGNGSDQADALQAALDALQTGQR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCE
LVLAPGQYVVGRSLLVKNAQVVVSGYGATLVATNDADQTIEMRGRDSTLVGVTLVGTGAT
EEEECCCEECCCEEEEECCEEEEEECCEEEEEECCCCCEEEECCCCCEEEEEEEEECCCE
RLTTPESTKVDVTGAGVQVLDVEVRGGASAGIFVFGGTDVAVVGNTVRDTLADGIHTTYG
EEECCCCCEEEEECCCEEEEEEEECCCCCCCEEEECCCEEEEECCHHHHHHHCCCEECCC
SRNVLVRDNTVQNTGDDMVAVVSYKGDGKLSSNVLIQNNTLLGNYWGRGATVVGGADVTI
CCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEECCCCCCEEEECCCEEEE
TGNTVRNVQKAAGILVGQEDPANTYDARNVIVSNNTISDIEWPDPDNTRPPAYMAAIDVN
ECHHHHHHHHHHCEEEECCCCCCCCCCCEEEEECCEECCCCCCCCCCCCCCEEEEEEEEE
TWSGKATSVSVTDNRISRARYAGVRALGNVCQLRVSRNALASIDGTPIALQQAPSCAAGQ
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEEECCCHHCCCCCCEEEEECCCCCCCCE
IVCASNTLDGAALASPAGCSATDGLTITGANVARMPQVRAYLRQTAAPSAAKAGTAASGE
EEEECCCCCCHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCC
>Mature Secondary Structure
MMNRSQQTFAGFAAACAFAAGSAAQGWAAPADAIVYPAGNGSDQADALQAALDALQTGQR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCE
LVLAPGQYVVGRSLLVKNAQVVVSGYGATLVATNDADQTIEMRGRDSTLVGVTLVGTGAT
EEEECCCEECCCEEEEECCEEEEEECCEEEEEECCCCCEEEECCCCCEEEEEEEEECCCE
RLTTPESTKVDVTGAGVQVLDVEVRGGASAGIFVFGGTDVAVVGNTVRDTLADGIHTTYG
EEECCCCCEEEEECCCEEEEEEEECCCCCCCEEEECCCEEEEECCHHHHHHHCCCEECCC
SRNVLVRDNTVQNTGDDMVAVVSYKGDGKLSSNVLIQNNTLLGNYWGRGATVVGGADVTI
CCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEECCEEEECCCCCCEEEECCCEEEE
TGNTVRNVQKAAGILVGQEDPANTYDARNVIVSNNTISDIEWPDPDNTRPPAYMAAIDVN
ECHHHHHHHHHHCEEEECCCCCCCCCCCEEEEECCEECCCCCCCCCCCCCCEEEEEEEEE
TWSGKATSVSVTDNRISRARYAGVRALGNVCQLRVSRNALASIDGTPIALQQAPSCAAGQ
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEEECCCHHCCCCCCEEEEECCCCCCCCE
IVCASNTLDGAALASPAGCSATDGLTITGANVARMPQVRAYLRQTAAPSAAKAGTAASGE
EEEECCCCCCHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA