Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is kdpA [H]

Identifier: 126453034

GI number: 126453034

Start: 1224120

End: 1225928

Strand: Direct

Name: kdpA [H]

Synonym: BURPS1106A_1249

Alternate gene names: 126453034

Gene position: 1224120-1225928 (Clockwise)

Preceding gene: 126452063

Following gene: 126454417

Centisome position: 30.69

GC content: 68.16

Gene sequence:

>1809_bases
ATGAACGCGAACAACCTGTTGCAGGCGGCGATCTTCATCGTCGTCCTGATCGCGGCGGCGGTGCCGGTCGCGCGCTATCT
GACGCGCGTGATGGACGGCTCATCGGCCGTGGTGCGCGTGTTCGGCCCGCTCGAGCGCGCGCTGTACCGGCTCGCGGGCA
TCGATCCGCGCACCGAGATGAGCTGGAAGCAGTACGCGTTGGCCACCGTCGCGTTCAACGCGCTCGGCGTGCTGTTCCTG
TACGCGCTGCTGCGCGTGCAGGGATGGCTGCCCGGCAATCCGCAAGGCTTCGGCCCGATGACGGTGGACGGCGCGCTCAA
CACCGCCGTGTCGTTCGTGACGAACACGAACTGGCAGGACTACACGCCCGAGCAGACCGTCAGCTATCTCGCGCAGATGC
TCGGCCTCACCGTGCAGAACTTCCTGTCGGCGGCGACGGGCATCGTCGTCGTGCTCGCGCTGATTCGCGGCTTCGCGCGG
CATACCGCGCAGACGATCGGCAACTTCTGGGTCGACGTGACGCGCGTGACGCTCTACGTGCTCGTGCCGATGGCGGCGAT
CATCGCCGCGCTGCTGATGAGCCAGGGCGTGATCCAGAACACGAAGGCGTACCAGGACGTGCCGACGCTGCAGACGACGT
CCTACGCGGCGCCCAGGCTCGACGCGCAGGGCAACCCCGTCAAGGACGCGAAGGGCAACCCGGTGACGGTGCAGACGAGC
GTGAAAGCGCAGACGCTCGCGATGGGCCCGGTCGCCTCGCAGGAAGCGATCAAGATGCTCGGCACGAACGGCGGCGGCTT
CTTCAACGGCAACTCCTCGCATCCGTACGAGAACCCGACGCCGTTCTCGAACTTCCTCGAGATCTTCGCGATCCTGATCA
TTCCGGCCGCGCTCTGCCTCGTGTTCGGCAACACGATCGGGGATCGCCGGCAGGGCGTCGCGGTGCTCGCCGCGATGACG
GTCGCGCTCGCGGCGGCGATCGGCATCGAGACGAGCGCGGAGCAGGGCGGCACGCCCGTGCTCGCGTCGCTGAACGTCGA
TCAGGCGGCGAGCCCGCTGCAGGCGGGCGGCAACATGGAAGGCAAGGAGACGCGCTTCGGCATCGCGCAGACGGGCCTTT
TCGTCGTCGCGACGACGGCCGCGTCGTGCGGCGCCGTCGACGCGATGCACGATTCGCTCACGCCCGTCGGCGGCCTCGTG
CCGATGCTGCTGATGCAACTGGGCGAGGTGATCTTCGGCGGCGTCGGCTCCGGCCTCTACGGAATGCTCGTGTTCGCGCT
GCTCGCGGTGTTCGTCGCGGGCCTGATGATCGGGCGCACGCCCGAGTACGTCGGCAAGAAGATCGAATCGTACGAGATGA
AGATGGTGTCGATCGTCGTGCTGCTCACGCCGCTGCTCGTGCTCGTCGGCACGTCGATCGCCGTGCTCGCCGACGCGGGG
CGCGCGGGCATCGCGAATCCGGGCCCGCACGGCTTCTCGGAAATCCTGTATGCGTTCAGCTCGGCCGCGAACAACAACGG
CAGCGCGTTCGGCGGGCTTTCGGTGAACACGCCGTTCTACAACTGGATGACGGCGATCGCGATGTGGTTCGGCCGCTTCG
GCACGATCGTGCCGGTGCTCGCGATCGCGGGCTCGCTCGCCGCGAAGAAGCGCATCGCCGCGACGAGCGGCACGCTGCCC
ACGCACGGCCCGCTGTTCGTCGTGCTGCTGCTCGGCACGGTGCTGCTCGTGGGCGCGCTCACGTACATGCCCGCGCTCGC
GCTCGGCCCGGGCGTCGAACACCTGATGCTGTTCGTCGGCGCGCATTGA

Upstream 100 bases:

>100_bases
GGGGGGCGTTCATGAGCTGGATGCTATGGTTGGCGGGAGCGTCGACGTTCCTGCTGTTCGCGTATCTCGTCTACGCGCTG
CTGCGCGCGGAGGACATCGA

Downstream 100 bases:

>100_bases
GCGCGCATCACGACACGAGAGGACTCGCGCAACGCCGGCCGGCCGGCGTTGCGTATCTGAGGATTGCAATGACTCAACAT
TCCGCTACGCGATCGATGTT

Product: potassium-transporting ATPase subunit A

Products: NA

Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain [H]

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MNANNLLQAAIFIVVLIAAAVPVARYLTRVMDGSSAVVRVFGPLERALYRLAGIDPRTEMSWKQYALATVAFNALGVLFL
YALLRVQGWLPGNPQGFGPMTVDGALNTAVSFVTNTNWQDYTPEQTVSYLAQMLGLTVQNFLSAATGIVVVLALIRGFAR
HTAQTIGNFWVDVTRVTLYVLVPMAAIIAALLMSQGVIQNTKAYQDVPTLQTTSYAAPRLDAQGNPVKDAKGNPVTVQTS
VKAQTLAMGPVASQEAIKMLGTNGGGFFNGNSSHPYENPTPFSNFLEIFAILIIPAALCLVFGNTIGDRRQGVAVLAAMT
VALAAAIGIETSAEQGGTPVLASLNVDQAASPLQAGGNMEGKETRFGIAQTGLFVVATTAASCGAVDAMHDSLTPVGGLV
PMLLMQLGEVIFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG
RAGIANPGPHGFSEILYAFSSAANNNGSAFGGLSVNTPFYNWMTAIAMWFGRFGTIVPVLAIAGSLAAKKRIAATSGTLP
THGPLFVVLLLGTVLLVGALTYMPALALGPGVEHLMLFVGAH

Sequences:

>Translated_602_residues
MNANNLLQAAIFIVVLIAAAVPVARYLTRVMDGSSAVVRVFGPLERALYRLAGIDPRTEMSWKQYALATVAFNALGVLFL
YALLRVQGWLPGNPQGFGPMTVDGALNTAVSFVTNTNWQDYTPEQTVSYLAQMLGLTVQNFLSAATGIVVVLALIRGFAR
HTAQTIGNFWVDVTRVTLYVLVPMAAIIAALLMSQGVIQNTKAYQDVPTLQTTSYAAPRLDAQGNPVKDAKGNPVTVQTS
VKAQTLAMGPVASQEAIKMLGTNGGGFFNGNSSHPYENPTPFSNFLEIFAILIIPAALCLVFGNTIGDRRQGVAVLAAMT
VALAAAIGIETSAEQGGTPVLASLNVDQAASPLQAGGNMEGKETRFGIAQTGLFVVATTAASCGAVDAMHDSLTPVGGLV
PMLLMQLGEVIFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG
RAGIANPGPHGFSEILYAFSSAANNNGSAFGGLSVNTPFYNWMTAIAMWFGRFGTIVPVLAIAGSLAAKKRIAATSGTLP
THGPLFVVLLLGTVLLVGALTYMPALALGPGVEHLMLFVGAH
>Mature_602_residues
MNANNLLQAAIFIVVLIAAAVPVARYLTRVMDGSSAVVRVFGPLERALYRLAGIDPRTEMSWKQYALATVAFNALGVLFL
YALLRVQGWLPGNPQGFGPMTVDGALNTAVSFVTNTNWQDYTPEQTVSYLAQMLGLTVQNFLSAATGIVVVLALIRGFAR
HTAQTIGNFWVDVTRVTLYVLVPMAAIIAALLMSQGVIQNTKAYQDVPTLQTTSYAAPRLDAQGNPVKDAKGNPVTVQTS
VKAQTLAMGPVASQEAIKMLGTNGGGFFNGNSSHPYENPTPFSNFLEIFAILIIPAALCLVFGNTIGDRRQGVAVLAAMT
VALAAAIGIETSAEQGGTPVLASLNVDQAASPLQAGGNMEGKETRFGIAQTGLFVVATTAASCGAVDAMHDSLTPVGGLV
PMLLMQLGEVIFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG
RAGIANPGPHGFSEILYAFSSAANNNGSAFGGLSVNTPFYNWMTAIAMWFGRFGTIVPVLAIAGSLAAKKRIAATSGTLP
THGPLFVVLLLGTVLLVGALTYMPALALGPGVEHLMLFVGAH

Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]

COG id: COG2060

COG function: function code P; K+-transporting ATPase, A chain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdpA family [H]

Homologues:

Organism=Escherichia coli, GI1786915, Length=600, Percent_Identity=55.8333333333333, Blast_Score=638, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004623 [H]

Pfam domain/function: PF03814 KdpA [H]

EC number: =3.6.3.12 [H]

Molecular weight: Translated: 62870; Mature: 62870

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANNLLQAAIFIVVLIAAAVPVARYLTRVMDGSSAVVRVFGPLERALYRLAGIDPRTEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
SWKQYALATVAFNALGVLFLYALLRVQGWLPGNPQGFGPMTVDGALNTAVSFVTNTNWQD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCC
YTPEQTVSYLAQMLGLTVQNFLSAATGIVVVLALIRGFARHTAQTIGNFWVDVTRVTLYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVPMAAIIAALLMSQGVIQNTKAYQDVPTLQTTSYAAPRLDAQGNPVKDAKGNPVTVQTS
HHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
VKAQTLAMGPVASQEAIKMLGTNGGGFFNGNSSHPYENPTPFSNFLEIFAILIIPAALCL
CCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VFGNTIGDRRQGVAVLAAMTVALAAAIGIETSAEQGGTPVLASLNVDQAASPLQAGGNME
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHCCHHHCCCCCC
GKETRFGIAQTGLFVVATTAASCGAVDAMHDSLTPVGGLVPMLLMQLGEVIFGGVGSGLY
CCHHHCCHHHCCCEEEEECCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
GMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCC
RAGIANPGPHGFSEILYAFSSAANNNGSAFGGLSVNTPFYNWMTAIAMWFGRFGTIVPVL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AIAGSLAAKKRIAATSGTLPTHGPLFVVLLLGTVLLVGALTYMPALALGPGVEHLMLFVG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
AH
CC
>Mature Secondary Structure
MNANNLLQAAIFIVVLIAAAVPVARYLTRVMDGSSAVVRVFGPLERALYRLAGIDPRTEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
SWKQYALATVAFNALGVLFLYALLRVQGWLPGNPQGFGPMTVDGALNTAVSFVTNTNWQD
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCC
YTPEQTVSYLAQMLGLTVQNFLSAATGIVVVLALIRGFARHTAQTIGNFWVDVTRVTLYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVPMAAIIAALLMSQGVIQNTKAYQDVPTLQTTSYAAPRLDAQGNPVKDAKGNPVTVQTS
HHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
VKAQTLAMGPVASQEAIKMLGTNGGGFFNGNSSHPYENPTPFSNFLEIFAILIIPAALCL
CCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VFGNTIGDRRQGVAVLAAMTVALAAAIGIETSAEQGGTPVLASLNVDQAASPLQAGGNME
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHCCHHHCCCCCC
GKETRFGIAQTGLFVVATTAASCGAVDAMHDSLTPVGGLVPMLLMQLGEVIFGGVGSGLY
CCHHHCCHHHCCCEEEEECCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
GMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCC
RAGIANPGPHGFSEILYAFSSAANNNGSAFGGLSVNTPFYNWMTAIAMWFGRFGTIVPVL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AIAGSLAAKKRIAATSGTLPTHGPLFVVLLLGTVLLVGALTYMPALALGPGVEHLMLFVG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
AH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA