| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453022
Identifier: 126453022
GI number: 126453022
Start: 1304159
End: 1305376
Strand: Reverse
Name: 126453022
Synonym: BURPS1106A_1335
Alternate gene names: NA
Gene position: 1305376-1304159 (Counterclockwise)
Preceding gene: 126454174
Following gene: 126453676
Centisome position: 32.73
GC content: 66.5
Gene sequence:
>1218_bases ATGCGCCAGCGAACCGCTAAACGCCTCCCTCCCGATGCCGACAAACTCGTCGGTCTGTCGCTCGCGCTGTTTGCGTCCGG CAGCCGCGTCGAAGATCGCTTCTGGGAAGCCAAGCTCGACGCCTTGCTCGCAAAGATCGTCCGCAACGGCAACCAGACCA CGCTCGACGCCGCGCTCGATCATCTCCAGCAGAATCACCCGGACGCCTATGGCGCGCTCGCCGACATGGCCGAGACGCAC AGCGAATCCCTGTCGGTCGAGCACGACGGCAAGCCATACGAAGCGCTCCTCGTCGCAATCCCCGTGCTCGCGTGGACCCG ATACATGATTCCGTCCGGCGCGCTGAAGAACGAAATCTCCGACGTATTGCGTACCCATCTGCAAGCGCACGTGCTCGCGC AAGGCACGCTCGTCGCGATGGCGCCCTTTCTTTACAGCATCGATCAACTGCCGCGCCATCACGTCGAAACTTACCGCCTC GCGCAGCAACTCGCGCACGCGGCGCTCGGCAACCATTCCGTCAAGCTCAATTACGGCGACCTGCCCGAGACCTCACCGAT CCTGGCCGACCCGCGCTTCCTGCTCGCCGTCGTCGCCGCGCCGGCGGGCGCCCCGCTCTTTCGCTGGCAGGAAGAGGAAC ACGGCTCGCGCATCGAGCGTGGTCAATGCCTCGAGCAGTGGGCAGCGCAAGGCGGCGTCAACTTGTCCGCCGCGCTCCCC GGCTGCGAGTTCGAATGCCTGCTGCCGGACGCGTATTACTCCGCGTGCCGCGACGCCGACGAACGCATCCGTCCGCACAC CGTGCGCACCGCGATCCGCTATTTGTTCGATACGATCGGCGCCGCGCCGCAAGAGCTGCGAGCCGTGCTCGCCGGCTTCG GCGAGCGCCGGATCGACGAATATCGCGTCGCCTTCACCCGCCGCGGCAGCAATGACGTCATCTATGGCGTCGTCTGGCCG CTGTACGGCCGCGAGAACGGCGAGGCATCGGTCGACGAGGCGACGCTCGAAGCCGAGGCCCCCGCCGACGGCCCGCTCGA GGAGATCGCCTCGCTGCTGAAGGAAGCGGGCGTGACCGACATTCGCCGCCACGCCGGCCGGTTCGAACCCGAATATTGCG ACGATTGCGGCGTTCCGTTGTACGCAGACCCGCTCGGCGAAATCGTCCATGCGGAGATGCCGGAGGACGCGACGCCCGCC CAGCCGCACTTCCACTAA
Upstream 100 bases:
>100_bases CTATTTTCCATAGAGATGACTGCCGGAAGGCCAGCAAACCGCTGAACAATCTCGGAACGGACTAAAATGACAGGTTCCTC GCATCCAACCATGTCAATCT
Downstream 100 bases:
>100_bases AGCCCGCCCAGCGCCGCGCAGTCAGGCGCGGGCGCACCGCCGAAGGCCGCCTCGAGGTTCCGCTCGACGCGGCCTTCGCG TTTTGGTTTGTCTGAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRQRTAKRLPPDADKLVGLSLALFASGSRVEDRFWEAKLDALLAKIVRNGNQTTLDAALDHLQQNHPDAYGALADMAETH SESLSVEHDGKPYEALLVAIPVLAWTRYMIPSGALKNEISDVLRTHLQAHVLAQGTLVAMAPFLYSIDQLPRHHVETYRL AQQLAHAALGNHSVKLNYGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEEHGSRIERGQCLEQWAAQGGVNLSAALP GCEFECLLPDAYYSACRDADERIRPHTVRTAIRYLFDTIGAAPQELRAVLAGFGERRIDEYRVAFTRRGSNDVIYGVVWP LYGRENGEASVDEATLEAEAPADGPLEEIASLLKEAGVTDIRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEMPEDATPA QPHFH
Sequences:
>Translated_405_residues MRQRTAKRLPPDADKLVGLSLALFASGSRVEDRFWEAKLDALLAKIVRNGNQTTLDAALDHLQQNHPDAYGALADMAETH SESLSVEHDGKPYEALLVAIPVLAWTRYMIPSGALKNEISDVLRTHLQAHVLAQGTLVAMAPFLYSIDQLPRHHVETYRL AQQLAHAALGNHSVKLNYGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEEHGSRIERGQCLEQWAAQGGVNLSAALP GCEFECLLPDAYYSACRDADERIRPHTVRTAIRYLFDTIGAAPQELRAVLAGFGERRIDEYRVAFTRRGSNDVIYGVVWP LYGRENGEASVDEATLEAEAPADGPLEEIASLLKEAGVTDIRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEMPEDATPA QPHFH >Mature_405_residues MRQRTAKRLPPDADKLVGLSLALFASGSRVEDRFWEAKLDALLAKIVRNGNQTTLDAALDHLQQNHPDAYGALADMAETH SESLSVEHDGKPYEALLVAIPVLAWTRYMIPSGALKNEISDVLRTHLQAHVLAQGTLVAMAPFLYSIDQLPRHHVETYRL AQQLAHAALGNHSVKLNYGDLPETSPILADPRFLLAVVAAPAGAPLFRWQEEEHGSRIERGQCLEQWAAQGGVNLSAALP GCEFECLLPDAYYSACRDADERIRPHTVRTAIRYLFDTIGAAPQELRAVLAGFGERRIDEYRVAFTRRGSNDVIYGVVWP LYGRENGEASVDEATLEAEAPADGPLEEIASLLKEAGVTDIRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEMPEDATPA QPHFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44618; Mature: 44618
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRTAKRLPPDADKLVGLSLALFASGSRVEDRFWEAKLDALLAKIVRNGNQTTLDAALD CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HLQQNHPDAYGALADMAETHSESLSVEHDGKPYEALLVAIPVLAWTRYMIPSGALKNEIS HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DVLRTHLQAHVLAQGTLVAMAPFLYSIDQLPRHHVETYRLAQQLAHAALGNHSVKLNYGD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC LPETSPILADPRFLLAVVAAPAGAPLFRWQEEEHGSRIERGQCLEQWAAQGGVNLSAALP CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEECCC GCEFECLLPDAYYSACRDADERIRPHTVRTAIRYLFDTIGAAPQELRAVLAGFGERRIDE CCCEEEECCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YRVAFTRRGSNDVIYGVVWPLYGRENGEASVDEATLEAEAPADGPLEEIASLLKEAGVTD HHHHHEECCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCHHH IRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEMPEDATPAQPHFH HHHHCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRQRTAKRLPPDADKLVGLSLALFASGSRVEDRFWEAKLDALLAKIVRNGNQTTLDAALD CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HLQQNHPDAYGALADMAETHSESLSVEHDGKPYEALLVAIPVLAWTRYMIPSGALKNEIS HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DVLRTHLQAHVLAQGTLVAMAPFLYSIDQLPRHHVETYRLAQQLAHAALGNHSVKLNYGD HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC LPETSPILADPRFLLAVVAAPAGAPLFRWQEEEHGSRIERGQCLEQWAAQGGVNLSAALP CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEECCC GCEFECLLPDAYYSACRDADERIRPHTVRTAIRYLFDTIGAAPQELRAVLAGFGERRIDE CCCEEEECCHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YRVAFTRRGSNDVIYGVVWPLYGRENGEASVDEATLEAEAPADGPLEEIASLLKEAGVTD HHHHHEECCCCCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCHHH IRRHAGRFEPEYCDDCGVPLYADPLGEIVHAEMPEDATPAQPHFH HHHHCCCCCCCHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA