| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452975
Identifier: 126452975
GI number: 126452975
Start: 3827181
End: 3827993
Strand: Reverse
Name: 126452975
Synonym: BURPS1106A_3922
Alternate gene names: NA
Gene position: 3827993-3827181 (Counterclockwise)
Preceding gene: 126454275
Following gene: 126454531
Centisome position: 95.98
GC content: 73.8
Gene sequence:
>813_bases TTGGATAAGCGCATCACCGATCAGGCCGAAGGGCTGCGGCGCCTGCTCGCCGGACGCGCGTCGCGCGTCGTCGCGGTGAC GGGCGGGCCGTCGGGCGTCGGCTGCACGTCGACGGTCGCCAATCTCGCCGCGGCGCTCACCGCGCTCGGCAAGGACGTGC TCGTCGTCGACGAGCGCGCGAACGTCCGCTCGATCGCGGCGACGCTGTGCGGCTCGTGGCTGCGCGACGGCGAGCCGGTG CGGCACGAGCTCGGCTTCGCGGTGTGCGAGGCGTCGCGGCTCGCGCGCGTCGGCTACAGCGACGCGCAGCTCGACGCGCT CGGCGACGGCGCGGCGGACATCGTGCTGATCGACGCGCAGCTCGACGCGAACGGCGCGCTCTCCGCGCTCGCGCGCGACG CGCACGACGTGCTCGTGGTCACGCGCGTGTCGGCCTCGGCGATCACCGAGGCGTACGCGTGCATGAAGCGGCTGCACTAC GCGCACGCGCGCGCGCAGTTTCGCGTGCTGACCAACCACGTGCAGAGCGCGGCCGACGCGAGAGCCGCCTACGAGAACCT CGCGGGCGTCGCGAGCCGGTATCTGCGCGTGTCGCTGTCGAACGCCGGTTGCGTCGCCGCCGATTCGCTGATCGAGCGCG CGCGCGGGCTCGCGCACACGGTGGTGGACGCGTTCCCGTCGGCGGCGGCGGCGCGCGACTACCGGCAGATCGCCGCCGAT CTGCTGTATTGGCCGATGCGTCCGGGTCCGGGCATCGGCCGGGTCCGGACGGGAAGTTCGGCGTTTGAACGCGGCGCGGC TCATGCCGCCTGA
Upstream 100 bases:
>100_bases CCGCGCGAGGATTCGCCGTTCGTGCCCCATGACGATGACCTGCCGGCGATGCTGTCCGCGTTGAGCACGCGCACCGGCAA CGAACTGCACGAGGTCCGCT
Downstream 100 bases:
>100_bases ACGCCACGACGAAGAGGGGGCATGATGTATAACGCTCAAGGCAAGATTTCCCAGGACGAAGTGCTGACGCAATACGCGCC GCTCGTGCGTCGTCTCGGCC
Product: putative flagellar protein
Products: NA
Alternate protein names: MinD-Related Protein; Flagellar Biosynthesisprotein FlhG; ParA Family Protein; Flagellar Synthesis Regulator; Cobyrinic Acid Ac-Diamide Synthase; Negative Regulator Of Flagellin Synthesis
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MDKRITDQAEGLRRLLAGRASRVVAVTGGPSGVGCTSTVANLAAALTALGKDVLVVDERANVRSIAATLCGSWLRDGEPV RHELGFAVCEASRLARVGYSDAQLDALGDGAADIVLIDAQLDANGALSALARDAHDVLVVTRVSASAITEAYACMKRLHY AHARAQFRVLTNHVQSAADARAAYENLAGVASRYLRVSLSNAGCVAADSLIERARGLAHTVVDAFPSAAAARDYRQIAAD LLYWPMRPGPGIGRVRTGSSAFERGAAHAA
Sequences:
>Translated_270_residues MDKRITDQAEGLRRLLAGRASRVVAVTGGPSGVGCTSTVANLAAALTALGKDVLVVDERANVRSIAATLCGSWLRDGEPV RHELGFAVCEASRLARVGYSDAQLDALGDGAADIVLIDAQLDANGALSALARDAHDVLVVTRVSASAITEAYACMKRLHY AHARAQFRVLTNHVQSAADARAAYENLAGVASRYLRVSLSNAGCVAADSLIERARGLAHTVVDAFPSAAAARDYRQIAAD LLYWPMRPGPGIGRVRTGSSAFERGAAHAA >Mature_270_residues MDKRITDQAEGLRRLLAGRASRVVAVTGGPSGVGCTSTVANLAAALTALGKDVLVVDERANVRSIAATLCGSWLRDGEPV RHELGFAVCEASRLARVGYSDAQLDALGDGAADIVLIDAQLDANGALSALARDAHDVLVVTRVSASAITEAYACMKRLHY AHARAQFRVLTNHVQSAADARAAYENLAGVASRYLRVSLSNAGCVAADSLIERARGLAHTVVDAFPSAAAARDYRQIAAD LLYWPMRPGPGIGRVRTGSSAFERGAAHAA
Specific function: Unknown
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28216; Mature: 28216
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKRITDQAEGLRRLLAGRASRVVAVTGGPSGVGCTSTVANLAAALTALGKDVLVVDERA CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC NVRSIAATLCGSWLRDGEPVRHELGFAVCEASRLARVGYSDAQLDALGDGAADIVLIDAQ CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEEE LDANGALSALARDAHDVLVVTRVSASAITEAYACMKRLHYAHARAQFRVLTNHVQSAADA ECCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAYENLAGVASRYLRVSLSNAGCVAADSLIERARGLAHTVVDAFPSAAAARDYRQIAAD HHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LLYWPMRPGPGIGRVRTGSSAFERGAAHAA HHHCCCCCCCCCCCEECCCHHHHCCCCCCC >Mature Secondary Structure MDKRITDQAEGLRRLLAGRASRVVAVTGGPSGVGCTSTVANLAAALTALGKDVLVVDERA CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC NVRSIAATLCGSWLRDGEPVRHELGFAVCEASRLARVGYSDAQLDALGDGAADIVLIDAQ CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEEE LDANGALSALARDAHDVLVVTRVSASAITEAYACMKRLHYAHARAQFRVLTNHVQSAADA ECCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAYENLAGVASRYLRVSLSNAGCVAADSLIERARGLAHTVVDAFPSAAAARDYRQIAAD HHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LLYWPMRPGPGIGRVRTGSSAFERGAAHAA HHHCCCCCCCCCCCEECCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA