| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452962
Identifier: 126452962
GI number: 126452962
Start: 3294826
End: 3296943
Strand: Direct
Name: 126452962
Synonym: BURPS1106A_3377
Alternate gene names: NA
Gene position: 3294826-3296943 (Clockwise)
Preceding gene: 126455295
Following gene: 126452352
Centisome position: 82.61
GC content: 70.11
Gene sequence:
>2118_bases ATGTTCGAATCCCTGACGACCCTGATCAAGAAGTGGCGCGCGTCGCGCAGCGCGAGCCATCAGCTCGACGCGCTCCTCGC GACGGCCGACGCGAACGCGCCGTACGCGGAACGCGCCGAATGGCTGATCGAGCTCGCGCACTGGCTGCATCGCGACGGCG CGATGACCGCCGCCGCGCCCGCGCAGCCCGAATCGGGCGAACGCACGTTCGCCGCGCACGCACGGCTGCGCTACGTATTC CACGTGCTCGACCGCAACCCCGCCTGGAAGACGAACGTCGCGCGCCTGCTGCGCGGCGTGCTGCGCGAAAGCGACGGCAT CTCGCTCCTGTGCGACGCCGGCATGCCCGTGCATTCGGGCTTCTTCGGCGCGCTTGTCGAGCGCATCGATTCGTCGCTGA TTCCGCCCGCGCCGAACCGCCGCGAGCTCGCCGCGCTCTTCACGCTGATGTTTCCGGCGCCCGCCGACGCGCAGTGGATC GACGCGCTGCCCGACGATCTGCTCGCCCGGCTGGCGGAGCTGTTCGCGTTCGACGTGACCGACAAGGAGCGCCACCAGCC CGGCTCGTTCTCGCGCGACCTGCTCGCCGCGCTGCACAACCTCACCTGCCAGATCAGCTCGACGGGGCTGTCGCAGACCG TGCGCAGCCGCCTGTCGGACGAGGATGCGCGCACGCCGCTCGAAGCGCAGCCGTTCTACCGGCTCACGCGCGCGATGCTC GCCGTCGAGACCGCGCAAGCCGCGCTCGACGACGGCGGCGACGCGAGCAAGCTGCTGCACGAGGTCAATTACCTGCGCGT GCTGCTCGACGAGTGCCGCGTGTCGATCGACGACGTGTTCTCGCACCTGTACCGCAACGGCGTATCGGTCGACATCGTGT TCCAGGTCGAGCGCATGCGCATGCGCATCCTGCGCGCGGAGACGCTGCTGAACGCCTGGATGGCGCGCGACGATCTGCGC GGGCTCGCGCGCCTGACGGCCGAGCTCGTCGACGCGAACCAGAACAGCCAGAGCGTGTCGCACCTCGTGCGCAGCAACTT CGCCCTGTTCGCGCGCAAGCTCGTCGAGACGAACGCGGACACGGGCGAGCACTACATCTCGCGCGGCCGCGCCGAATACC TGAAGATGCTGCGCATGGCGGCGGGCGGCGGCCTCGTGACGGTCGCCACCGTCTGCATCAAATTCGGGATCACGGGCGCG CACCTGCAATCGATGTTCGAAGGGCTGCTCGCCGGCATCAACTACGCGGCGAGCTTCATGCTGATGCACTTCCTGCACTT CACGCTCGCGACGAAGCAGCCGGCGATGACCGCGCCGACGATCGCGCGCGAGCTCGACGGCACCGGCCACGACGAAGGCG TGAAGCAGTTCGTGTCGTCGGTGATCGCGCTGATCCGCACGCAGGCGGCCGCGATCTGCGGCAACGTGCTCGTCGTGCTG CCCGTGTGCTTCGCGGTGCAGATGTTCGCGAGCGGCGTGCTGCATGCGAACCTGATCTCGCCGGACAAGGCGCACGCGAC GCTGAAATCGTTCTCGCTGTTCGGCCCGACGCCGATCTACGCGGCGCTCACGGGTGTGCTGCTGTGGGCGTCGAGCCTGC TCGCCGGCTGGGCCGACAACTGGTTCGTGCTGCACCGCGTCGGCGACGCGCTCGCGTACAACCGCCGCCTGCGCATCACG CTCGGCGTCGCGGGCGCGGCAAAGCTCGCGCATTTCTGCCGCTCGAACGTCGCGGGCGTCGTCGGCAACGTCGGGCTCGG GCTGATGCTCGGCCTCGTGCCGGCGATCGTCAGCGCGTTCGCGTTCTCGTTCGAGGTGCGGCACGTGACGCTGTCCGCCG GCTCGATCGGTGTCGCGATCGGCGTGCTCGGCAAGGAAACGCTGCGCTCGGCCGAGCTGTGGTGGGCGGTCGCGGGCGTC TTCAGCATGGCGATCCTCAACGTCGCGGTGAGCTTCGCGCTCGCGTTCACGATGGCGGTACGCTCGCGCAGCCTGCGGCC GACGAAAGTGCGCGCGCTCGTCGCGGCGATCGGCCGCGCGGTGCTCGCGCGGCCGGCGAGCCTCGTGTGGCCGCCGCGCG GCGCAGGCGGCGCGGCGGGCGAATCCCGCGCGCACTGA
Upstream 100 bases:
>100_bases CGACCGAACCACCGCGCGCGAGCCGCCCTTGCGCCTCGCCGCCGGTTTGCGCAGCATCTCGACAGAAACCTGCCCGTAGG GGCGCCCGATATTCCCGCTT
Downstream 100 bases:
>100_bases GCGCCCGGCGGGCCGCGCACGCCGACGCAGCCGCATGGCGGCGTAACGGCATTAAGACGTAACGGCATCAAGACGTAACG GCATCAAGACGTGGCGGCAC
Product: putative membrane proten
Products: NA
Alternate protein names: Site-Specific Recombinase Transmembrane Protein; Site-Specific Recombinase Gcr; Site-Specific Recombinase Prophage Insertion; Site-Specific Recombinase-Like Protein; Site-Specific Recombinase Protein Gcr; Adventurous Gliding Motility Protein AgmG; Adventurous Gliding Motility Protein
Number of amino acids: Translated: 705; Mature: 705
Protein sequence:
>705_residues MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERTFAAHARLRYVF HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL PVCFAVQMFASGVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHRVGDALAYNRRLRIT LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH
Sequences:
>Translated_705_residues MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERTFAAHARLRYVF HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL PVCFAVQMFASGVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHRVGDALAYNRRLRIT LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH >Mature_705_residues MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERTFAAHARLRYVF HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL PVCFAVQMFASGVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHRVGDALAYNRRLRIT LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH
Specific function: Unknown
COG id: COG4389
COG function: function code L; Site-specific recombinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76353; Mature: 76353
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAP CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC AQPESGERTFAAHARLRYVFHVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC FFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWIDALPDDLLARLAELFAFDVT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCC DKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML CHHCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHH MRILRAETLLNAWMARDDLRGLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGAHLQSMFEGLLAGINYAASFM CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVCFAVQMFASGVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADN HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC WFVLHRVGDALAYNRRLRITLGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAF CCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGVFSMAILNVAVSFALAFTMAV HHHHEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH HHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAP CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC AQPESGERTFAAHARLRYVFHVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC FFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWIDALPDDLLARLAELFAFDVT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCC DKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML CHHCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHH MRILRAETLLNAWMARDDLRGLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGAHLQSMFEGLLAGINYAASFM CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVCFAVQMFASGVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADN HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC WFVLHRVGDALAYNRRLRITLGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAF CCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGVFSMAILNVAVSFALAFTMAV HHHHEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH HHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA