| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452959
Identifier: 126452959
GI number: 126452959
Start: 1119424
End: 1121010
Strand: Reverse
Name: 126452959
Synonym: BURPS1106A_1141
Alternate gene names: NA
Gene position: 1121010-1119424 (Counterclockwise)
Preceding gene: 126454515
Following gene: 126452097
Centisome position: 28.11
GC content: 65.85
Gene sequence:
>1587_bases ATGGGAGGAGAAAACGTGACACAGGTGGAATCACCCAGACAGGCAACGGCAGGTTCGGCGGAGCAAGCCGCCGGCAAGCT CGGCGGATTGCTCTCGCTCGCATTCCTGCTGAGCCTGATGACGGTCATGGCCGCGTTCGGCTGGATCGCGCTGCGCGAAG GCACGCATCGCTTCCTGCTCCCGTTCGTGAACGGCAACGCCACCCGGCAGATCGCCGACGCGATCGCATCCGTCCGTGCG CATCCGTCGCTCGAAGGCATACGCCAGGTCAGCGAGGAAATATGGATGATGTCGCTGCCGACGTCAGTCACGCGTTTCAG CCATTCCAGACTGATGGAGCAAGGCATCTATTACACGACGATGCCCAGGGTCAATCAGGTGCTCATCGCGATTCACGTCC TGTTCAGCGCGTTCTGCGTGACGTTCGGGAGCCTGCAGTTCTGGCCGTCGTTCCGCAAGCGCTTCATGCGGGCGCACCGG CTGATCGGCGCCGTATACGTCGCCACCGTGCCGATCTCGACGGTGAGCGCACTCGCCTATCTCGCCCTGACACCGCCGCA TCACCTCTACGCACACCTGATCGGCTGGATCGCGCTGTGGATATTCGGCGTCCTGACGCTCATCGCGATCGCCATGGCGG TGCGCGCCCTCAAGGCACACAGGATTTTCGAACACCAGGCGTGGATGGCGCTGTCGTTCGGCTGCCTGCTGGTTGCGCCG CTGCTGCGCATCGACTGGGTGCTGCTCGCGCCGCTCTTTCCCCACATCGATCAGGAAACCCTGAACCTCGTCACCATGGG CGTCATGCTTCCGCAGGCGCAGCTGATCACGTATGCGCTGATCGTCGTCAATCGGCAGTACGCGCGGCCCATGAAGCAAC GCACGCCGGCGCCGCTGGCGAGCCGCGCGGGCGCGTGGTTCCTTCGATCGCAACCCGGGTTGCTCGCCTCGACCGCGGTG TGGGGCGCCGTCAATGTGTGGGCCTACGGGCTCGGACACGGCACCGCCGGCCTCGACGCCGCCGCCCGCATGCTTCCCGC CGATCTGTTGACGCGGGAGCAGGCGGCGCTGCATGCGTATCCGGGCATCGCGTGGCTGATGGCGCTGTCGCTTACCGCGG CATTTCCCGCCGCCGTCCTGAGCCTCGGTGCGCGGCTTCGCGCCGCGTCGGCAAGCGTCGCCGCGCGTCTCGATGCCACC GCCGCGTGCCTGGGACTGGCCGCGGGCGCGGCGAGCGTGTTCCTCGGTTGGCACATCGGGATCGCCCCCGACAATCACCT GTTCTCCGGCGGCACGATGTATACGGTCAACGGGCTCGTCATCGCCGGCTTCAGCCTGATGCTCGCCGCGACCGCACGGC GCCGGCAACACGCGATCGCGAAGGAAAGCCTCGTCTTCCTTCTTTGCATGCTGCCCTTCCCCGCGTTGTATTTCGCGACG CTGGAGGCCGTCGGCCGAATTCGGCTGCCGGCTGCGTACCTGGCGGCCGGCCAAGGCTTCGTGATTCCGGTCGGCTTCAG CAGCAGCCTGCTTTTTCTGGCCGCTTTCCATGTGATCTTCGGCCAGGCAACCCGAGAGCACAACTAA
Upstream 100 bases:
>100_bases CGGCCCGACGACGTTTGAAGGTATTCCTCACCCCATAAAGTTCCTTTTTGGAACGTACAATTTCGCCGGGCACGCGCGCG GCGAACGCACCGCGGCCAAC
Downstream 100 bases:
>100_bases CCACTTCGGAGCGACCCGACATGCACACGCCCGACCTCTTCGTTCAATCGAGCAACGTCCGCCTGGCGGTCTATACGTGG GGCGACAAGCCCAGTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MGGENVTQVESPRQATAGSAEQAAGKLGGLLSLAFLLSLMTVMAAFGWIALREGTHRFLLPFVNGNATRQIADAIASVRA HPSLEGIRQVSEEIWMMSLPTSVTRFSHSRLMEQGIYYTTMPRVNQVLIAIHVLFSAFCVTFGSLQFWPSFRKRFMRAHR LIGAVYVATVPISTVSALAYLALTPPHHLYAHLIGWIALWIFGVLTLIAIAMAVRALKAHRIFEHQAWMALSFGCLLVAP LLRIDWVLLAPLFPHIDQETLNLVTMGVMLPQAQLITYALIVVNRQYARPMKQRTPAPLASRAGAWFLRSQPGLLASTAV WGAVNVWAYGLGHGTAGLDAAARMLPADLLTREQAALHAYPGIAWLMALSLTAAFPAAVLSLGARLRAASASVAARLDAT AACLGLAAGAASVFLGWHIGIAPDNHLFSGGTMYTVNGLVIAGFSLMLAATARRRQHAIAKESLVFLLCMLPFPALYFAT LEAVGRIRLPAAYLAAGQGFVIPVGFSSSLLFLAAFHVIFGQATREHN
Sequences:
>Translated_528_residues MGGENVTQVESPRQATAGSAEQAAGKLGGLLSLAFLLSLMTVMAAFGWIALREGTHRFLLPFVNGNATRQIADAIASVRA HPSLEGIRQVSEEIWMMSLPTSVTRFSHSRLMEQGIYYTTMPRVNQVLIAIHVLFSAFCVTFGSLQFWPSFRKRFMRAHR LIGAVYVATVPISTVSALAYLALTPPHHLYAHLIGWIALWIFGVLTLIAIAMAVRALKAHRIFEHQAWMALSFGCLLVAP LLRIDWVLLAPLFPHIDQETLNLVTMGVMLPQAQLITYALIVVNRQYARPMKQRTPAPLASRAGAWFLRSQPGLLASTAV WGAVNVWAYGLGHGTAGLDAAARMLPADLLTREQAALHAYPGIAWLMALSLTAAFPAAVLSLGARLRAASASVAARLDAT AACLGLAAGAASVFLGWHIGIAPDNHLFSGGTMYTVNGLVIAGFSLMLAATARRRQHAIAKESLVFLLCMLPFPALYFAT LEAVGRIRLPAAYLAAGQGFVIPVGFSSSLLFLAAFHVIFGQATREHN >Mature_527_residues GGENVTQVESPRQATAGSAEQAAGKLGGLLSLAFLLSLMTVMAAFGWIALREGTHRFLLPFVNGNATRQIADAIASVRAH PSLEGIRQVSEEIWMMSLPTSVTRFSHSRLMEQGIYYTTMPRVNQVLIAIHVLFSAFCVTFGSLQFWPSFRKRFMRAHRL IGAVYVATVPISTVSALAYLALTPPHHLYAHLIGWIALWIFGVLTLIAIAMAVRALKAHRIFEHQAWMALSFGCLLVAPL LRIDWVLLAPLFPHIDQETLNLVTMGVMLPQAQLITYALIVVNRQYARPMKQRTPAPLASRAGAWFLRSQPGLLASTAVW GAVNVWAYGLGHGTAGLDAAARMLPADLLTREQAALHAYPGIAWLMALSLTAAFPAAVLSLGARLRAASASVAARLDATA ACLGLAAGAASVFLGWHIGIAPDNHLFSGGTMYTVNGLVIAGFSLMLAATARRRQHAIAKESLVFLLCMLPFPALYFATL EAVGRIRLPAAYLAAGQGFVIPVGFSSSLLFLAAFHVIFGQATREHN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56952; Mature: 56821
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGENVTQVESPRQATAGSAEQAAGKLGGLLSLAFLLSLMTVMAAFGWIALREGTHRFLL CCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEE PFVNGNATRQIADAIASVRAHPSLEGIRQVSEEIWMMSLPTSVTRFSHSRLMEQGIYYTT EEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE MPRVNQVLIAIHVLFSAFCVTFGSLQFWPSFRKRFMRAHRLIGAVYVATVPISTVSALAY CHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LALTPPHHLYAHLIGWIALWIFGVLTLIAIAMAVRALKAHRIFEHQAWMALSFGCLLVAP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRIDWVLLAPLFPHIDQETLNLVTMGVMLPQAQLITYALIVVNRQYARPMKQRTPAPLA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCHHHHCCCCCHH SRAGAWFLRSQPGLLASTAVWGAVNVWAYGLGHGTAGLDAAARMLPADLLTREQAALHAY HCCCCEEEECCCCCEEHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PGIAWLMALSLTAAFPAAVLSLGARLRAASASVAARLDATAACLGLAAGAASVFLGWHIG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE IAPDNHLFSGGTMYTVNGLVIAGFSLMLAATARRRQHAIAKESLVFLLCMLPFPALYFAT CCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEAVGRIRLPAAYLAAGQGFVIPVGFSSSLLFLAAFHVIFGQATREHN HHHHCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GGENVTQVESPRQATAGSAEQAAGKLGGLLSLAFLLSLMTVMAAFGWIALREGTHRFLL CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEE PFVNGNATRQIADAIASVRAHPSLEGIRQVSEEIWMMSLPTSVTRFSHSRLMEQGIYYTT EEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE MPRVNQVLIAIHVLFSAFCVTFGSLQFWPSFRKRFMRAHRLIGAVYVATVPISTVSALAY CHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LALTPPHHLYAHLIGWIALWIFGVLTLIAIAMAVRALKAHRIFEHQAWMALSFGCLLVAP HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRIDWVLLAPLFPHIDQETLNLVTMGVMLPQAQLITYALIVVNRQYARPMKQRTPAPLA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCHHHHCCCCCHH SRAGAWFLRSQPGLLASTAVWGAVNVWAYGLGHGTAGLDAAARMLPADLLTREQAALHAY HCCCCEEEECCCCCEEHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PGIAWLMALSLTAAFPAAVLSLGARLRAASASVAARLDATAACLGLAAGAASVFLGWHIG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE IAPDNHLFSGGTMYTVNGLVIAGFSLMLAATARRRQHAIAKESLVFLLCMLPFPALYFAT CCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEAVGRIRLPAAYLAAGQGFVIPVGFSSSLLFLAAFHVIFGQATREHN HHHHCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA