| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is thiL [H]
Identifier: 126452891
GI number: 126452891
Start: 3383489
End: 3384490
Strand: Direct
Name: thiL [H]
Synonym: BURPS1106A_3477
Alternate gene names: 126452891
Gene position: 3383489-3384490 (Clockwise)
Preceding gene: 126452434
Following gene: 126454812
Centisome position: 84.83
GC content: 73.85
Gene sequence:
>1002_bases GTGGCCCATCCTCCCCTTTCGGAATTTTCGTTGATCGACCGCTTCTTCGCGCGCCGCGCGACGGGGCCGCACGCGCGCGC CGCGCTCGGCATCGGCGACGATTGCGCGCTGCTTGCACCAGAACCGGGCAAGCTGCTGGCGGTTTCGACGGACATGCTGG TCGAAGGCCGGCACTTCCTCGCCGATGTCGATCCGCGCGCGCTCGGCCACAAGACGCTCGCCGTCAATTTGTCCGATCTC GCCGCGATGGGCGCCGCGCCGCGCGCGTTCACGCTCGCGTGCGCGCTGCCGCGCGCCGACGCCGACTGGCTCGAGGCGTT TTCCGACGGCCTTTTCGCGCTCGCGGAGCGCCACGGCTGCGAGCTGATCGGCGGCGACACGACGAGCGGGCCGCTCAACC TGTGCGTCACGGTGTTCGGCGACGTCGCGTGCGGCGCCGCGTTGCGTCGAGACGCCGCACGCGACGGCGACGACGTCTGG GTATCCGGCACGCTCGGCGATGCGCGCGCCGGCCTCGGCGTGATCCGCGGCGAATGGCGCGCGGGCGAGCGCGAGGCGGC GGCGTTCCGGCGCGCGCTCGAATGGCCGCAACCGCGCGTCGCGCTCGGCGTCGCGCTCGCGGGCATCGCGCACGCGGCGC TCGACGTGTCCGACGGCCTCGCGGGCGATCTGCCGCACATCCTCGAGCGCTCGAACGTGCGCGCCGACGTGGACGTCGAC GCGGTGCCGCGCTCGGCCGCGCTCGCGACCCTGCCCGCCGACGTGCAGCGCCGCTGCATGCTCGAAGGCGGCGACGACTA CGAGCTGTGCTTCACCGCCGCGCCGTCCGCGCGCACCGCGATCGACGCGGCCGGCGCGCGCGCGGGCGTGGCCGTCACGC GCATCGGTACAATACGCGGCTTGTCCGCGCCGACGGACGCGCGCGCCGTGACGTGGCGCGACGCGTCGGGCGCGCCGCTT TCCCTCACGCTGCACGGTTTCGATCATTTCCATGCCAACTGA
Upstream 100 bases:
>100_bases AAACGTCACGAATCGGCTGCGCGCGAGCCGCCGCCGCGCCGGGCCGCGGCTCGAAGCGCCTTACAATGGGCGACATCTCA ACGCTCGGACATCCGCGCCC
Downstream 100 bases:
>100_bases CCCGACGCCCCGTCCGGCCGATTCCGCCGATTCCGCCAGCCAGCCCGGCGCCACGCCCGCGCCGGCCTCGTCGCCCGCGC CGCGGCGGGATTCGCCGCAG
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MAHPPLSEFSLIDRFFARRATGPHARAALGIGDDCALLAPEPGKLLAVSTDMLVEGRHFLADVDPRALGHKTLAVNLSDL AAMGAAPRAFTLACALPRADADWLEAFSDGLFALAERHGCELIGGDTTSGPLNLCVTVFGDVACGAALRRDAARDGDDVW VSGTLGDARAGLGVIRGEWRAGEREAAAFRRALEWPQPRVALGVALAGIAHAALDVSDGLAGDLPHILERSNVRADVDVD AVPRSAALATLPADVQRRCMLEGGDDYELCFTAAPSARTAIDAAGARAGVAVTRIGTIRGLSAPTDARAVTWRDASGAPL SLTLHGFDHFHAN
Sequences:
>Translated_333_residues MAHPPLSEFSLIDRFFARRATGPHARAALGIGDDCALLAPEPGKLLAVSTDMLVEGRHFLADVDPRALGHKTLAVNLSDL AAMGAAPRAFTLACALPRADADWLEAFSDGLFALAERHGCELIGGDTTSGPLNLCVTVFGDVACGAALRRDAARDGDDVW VSGTLGDARAGLGVIRGEWRAGEREAAAFRRALEWPQPRVALGVALAGIAHAALDVSDGLAGDLPHILERSNVRADVDVD AVPRSAALATLPADVQRRCMLEGGDDYELCFTAAPSARTAIDAAGARAGVAVTRIGTIRGLSAPTDARAVTWRDASGAPL SLTLHGFDHFHAN >Mature_332_residues AHPPLSEFSLIDRFFARRATGPHARAALGIGDDCALLAPEPGKLLAVSTDMLVEGRHFLADVDPRALGHKTLAVNLSDLA AMGAAPRAFTLACALPRADADWLEAFSDGLFALAERHGCELIGGDTTSGPLNLCVTVFGDVACGAALRRDAARDGDDVWV SGTLGDARAGLGVIRGEWRAGEREAAAFRRALEWPQPRVALGVALAGIAHAALDVSDGLAGDLPHILERSNVRADVDVDA VPRSAALATLPADVQRRCMLEGGDDYELCFTAAPSARTAIDAAGARAGVAVTRIGTIRGLSAPTDARAVTWRDASGAPLS LTLHGFDHFHAN
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=330, Percent_Identity=44.8484848484849, Blast_Score=236, Evalue=1e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 34716; Mature: 34584
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPPLSEFSLIDRFFARRATGPHARAALGIGDDCALLAPEPGKLLAVSTDMLVEGRHFL CCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEECCCCCCEEEEEHHHEECCCHHE ADVDPRALGHKTLAVNLSDLAAMGAAPRAFTLACALPRADADWLEAFSDGLFALAERHGC ECCCCHHHCCEEEEEEHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC ELIGGDTTSGPLNLCVTVFGDVACGAALRRDAARDGDDVWVSGTLGDARAGLGVIRGEWR EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCEEEECCCC AGEREAAAFRRALEWPQPRVALGVALAGIAHAALDVSDGLAGDLPHILERSNVRADVDVD CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC AVPRSAALATLPADVQRRCMLEGGDDYELCFTAAPSARTAIDAAGARAGVAVTRIGTIRG CCCCCHHEEECCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCCEEEEEEEHCCC LSAPTDARAVTWRDASGAPLSLTLHGFDHFHAN CCCCCCCCEEEEECCCCCEEEEEEECCCCCCCC >Mature Secondary Structure AHPPLSEFSLIDRFFARRATGPHARAALGIGDDCALLAPEPGKLLAVSTDMLVEGRHFL CCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEECCCCCCEEEEEHHHEECCCHHE ADVDPRALGHKTLAVNLSDLAAMGAAPRAFTLACALPRADADWLEAFSDGLFALAERHGC ECCCCHHHCCEEEEEEHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC ELIGGDTTSGPLNLCVTVFGDVACGAALRRDAARDGDDVWVSGTLGDARAGLGVIRGEWR EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHCCEEEECCCC AGEREAAAFRRALEWPQPRVALGVALAGIAHAALDVSDGLAGDLPHILERSNVRADVDVD CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC AVPRSAALATLPADVQRRCMLEGGDDYELCFTAAPSARTAIDAAGARAGVAVTRIGTIRG CCCCCHHEEECCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCCEEEEEEEHCCC LSAPTDARAVTWRDASGAPLSLTLHGFDHFHAN CCCCCCCCEEEEECCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]