Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126452824

Identifier: 126452824

GI number: 126452824

Start: 921542

End: 922069

Strand: Direct

Name: 126452824

Synonym: BURPS1106A_0939

Alternate gene names: NA

Gene position: 921542-922069 (Clockwise)

Preceding gene: 126451801

Following gene: 126455021

Centisome position: 23.11

GC content: 70.27

Gene sequence:

>528_bases
ATGAGGACCTTGGTCGACCAACTCGCGCAGTACGCGGCCTATCACCGCGACGCACGCAACATTGCGACGCATCTCGTCGG
CATTCCGATGATCGTCGTCGCGGTGACGGTGTTGCTGTCGCGGCCGACGTTCGGCGCATGGGGCGCATTCGCGCTCACGC
CCGCGGCGCTCGTCGCGCTCGCGGCGGCGCTTTTCTATCTGCGGCTCGACCTGCGCTTCGGCGTCGCGATGGCCGCGCTG
CTCGCGCTGAGCCTCTGGGCCGGCCGCGCGCTTGCCGCGCAGACGACCGCGTTCTGGCTCGGCACGGGGCTCGGGCTCTT
TTTCGTCGGCTGGGTGATCCAGTTCGTCGGCCATTACTTCGAAGGCCGCAAGCCCGCGTTCGTCGACGACCTGATCGGGC
TCATCGTCGGCCCGCTGTTCGTCGTCGCCGAGGTTGCGTTCTTCGCCGGCTTGCGCGGCGACGTGCGCGACGCGGTCGAG
CGGCGCGTCGGGCCGGTGCGTGTGGGCGCGCGCAACGCGCGCGTCTGA

Upstream 100 bases:

>100_bases
CGAAGAGCGGATGCATCGGCCGTGGCGGTGTCGGGTAGCTGACAGAGAAAACGTCGCGTGAAGGGCATGATAGCGCTCAC
TCGCATCGGGAGGAGACACG

Downstream 100 bases:

>100_bases
GCCGCGCCGCGCGCGATGGCGACGATCTGCGTCTATGGCGCGGGCGCGGTCGGCTGCTATCTCGGCGGCCGGCTGCTCGC
GGGCGGCGCGGATGTCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRTLVDQLAQYAAYHRDARNIATHLVGIPMIVVAVTVLLSRPTFGAWGAFALTPAALVALAAALFYLRLDLRFGVAMAAL
LALSLWAGRALAAQTTAFWLGTGLGLFFVGWVIQFVGHYFEGRKPAFVDDLIGLIVGPLFVVAEVAFFAGLRGDVRDAVE
RRVGPVRVGARNARV

Sequences:

>Translated_175_residues
MRTLVDQLAQYAAYHRDARNIATHLVGIPMIVVAVTVLLSRPTFGAWGAFALTPAALVALAAALFYLRLDLRFGVAMAAL
LALSLWAGRALAAQTTAFWLGTGLGLFFVGWVIQFVGHYFEGRKPAFVDDLIGLIVGPLFVVAEVAFFAGLRGDVRDAVE
RRVGPVRVGARNARV
>Mature_175_residues
MRTLVDQLAQYAAYHRDARNIATHLVGIPMIVVAVTVLLSRPTFGAWGAFALTPAALVALAAALFYLRLDLRFGVAMAAL
LALSLWAGRALAAQTTAFWLGTGLGLFFVGWVIQFVGHYFEGRKPAFVDDLIGLIVGPLFVVAEVAFFAGLRGDVRDAVE
RRVGPVRVGARNARV

Specific function: Unknown

COG id: COG4539

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321428, Length=174, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18854; Mature: 18854

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLVDQLAQYAAYHRDARNIATHLVGIPMIVVAVTVLLSRPTFGAWGAFALTPAALVAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AAALFYLRLDLRFGVAMAALLALSLWAGRALAAQTTAFWLGTGLGLFFVGWVIQFVGHYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGRKPAFVDDLIGLIVGPLFVVAEVAFFAGLRGDVRDAVERRVGPVRVGARNARV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTLVDQLAQYAAYHRDARNIATHLVGIPMIVVAVTVLLSRPTFGAWGAFALTPAALVAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AAALFYLRLDLRFGVAMAALLALSLWAGRALAAQTTAFWLGTGLGLFFVGWVIQFVGHYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGRKPAFVDDLIGLIVGPLFVVAEVAFFAGLRGDVRDAVERRVGPVRVGARNARV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA