| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452824
Identifier: 126452824
GI number: 126452824
Start: 921542
End: 922069
Strand: Direct
Name: 126452824
Synonym: BURPS1106A_0939
Alternate gene names: NA
Gene position: 921542-922069 (Clockwise)
Preceding gene: 126451801
Following gene: 126455021
Centisome position: 23.11
GC content: 70.27
Gene sequence:
>528_bases ATGAGGACCTTGGTCGACCAACTCGCGCAGTACGCGGCCTATCACCGCGACGCACGCAACATTGCGACGCATCTCGTCGG CATTCCGATGATCGTCGTCGCGGTGACGGTGTTGCTGTCGCGGCCGACGTTCGGCGCATGGGGCGCATTCGCGCTCACGC CCGCGGCGCTCGTCGCGCTCGCGGCGGCGCTTTTCTATCTGCGGCTCGACCTGCGCTTCGGCGTCGCGATGGCCGCGCTG CTCGCGCTGAGCCTCTGGGCCGGCCGCGCGCTTGCCGCGCAGACGACCGCGTTCTGGCTCGGCACGGGGCTCGGGCTCTT TTTCGTCGGCTGGGTGATCCAGTTCGTCGGCCATTACTTCGAAGGCCGCAAGCCCGCGTTCGTCGACGACCTGATCGGGC TCATCGTCGGCCCGCTGTTCGTCGTCGCCGAGGTTGCGTTCTTCGCCGGCTTGCGCGGCGACGTGCGCGACGCGGTCGAG CGGCGCGTCGGGCCGGTGCGTGTGGGCGCGCGCAACGCGCGCGTCTGA
Upstream 100 bases:
>100_bases CGAAGAGCGGATGCATCGGCCGTGGCGGTGTCGGGTAGCTGACAGAGAAAACGTCGCGTGAAGGGCATGATAGCGCTCAC TCGCATCGGGAGGAGACACG
Downstream 100 bases:
>100_bases GCCGCGCCGCGCGCGATGGCGACGATCTGCGTCTATGGCGCGGGCGCGGTCGGCTGCTATCTCGGCGGCCGGCTGCTCGC GGGCGGCGCGGATGTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MRTLVDQLAQYAAYHRDARNIATHLVGIPMIVVAVTVLLSRPTFGAWGAFALTPAALVALAAALFYLRLDLRFGVAMAAL LALSLWAGRALAAQTTAFWLGTGLGLFFVGWVIQFVGHYFEGRKPAFVDDLIGLIVGPLFVVAEVAFFAGLRGDVRDAVE RRVGPVRVGARNARV
Sequences:
>Translated_175_residues MRTLVDQLAQYAAYHRDARNIATHLVGIPMIVVAVTVLLSRPTFGAWGAFALTPAALVALAAALFYLRLDLRFGVAMAAL LALSLWAGRALAAQTTAFWLGTGLGLFFVGWVIQFVGHYFEGRKPAFVDDLIGLIVGPLFVVAEVAFFAGLRGDVRDAVE RRVGPVRVGARNARV >Mature_175_residues MRTLVDQLAQYAAYHRDARNIATHLVGIPMIVVAVTVLLSRPTFGAWGAFALTPAALVALAAALFYLRLDLRFGVAMAAL LALSLWAGRALAAQTTAFWLGTGLGLFFVGWVIQFVGHYFEGRKPAFVDDLIGLIVGPLFVVAEVAFFAGLRGDVRDAVE RRVGPVRVGARNARV
Specific function: Unknown
COG id: COG4539
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321428, Length=174, Percent_Identity=29.3103448275862, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18854; Mature: 18854
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLVDQLAQYAAYHRDARNIATHLVGIPMIVVAVTVLLSRPTFGAWGAFALTPAALVAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH AAALFYLRLDLRFGVAMAALLALSLWAGRALAAQTTAFWLGTGLGLFFVGWVIQFVGHYF HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRKPAFVDDLIGLIVGPLFVVAEVAFFAGLRGDVRDAVERRVGPVRVGARNARV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MRTLVDQLAQYAAYHRDARNIATHLVGIPMIVVAVTVLLSRPTFGAWGAFALTPAALVAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH AAALFYLRLDLRFGVAMAALLALSLWAGRALAAQTTAFWLGTGLGLFFVGWVIQFVGHYF HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRKPAFVDDLIGLIVGPLFVVAEVAFFAGLRGDVRDAVERRVGPVRVGARNARV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA