| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452729
Identifier: 126452729
GI number: 126452729
Start: 923647
End: 924252
Strand: Direct
Name: 126452729
Synonym: BURPS1106A_0942
Alternate gene names: NA
Gene position: 923647-924252 (Clockwise)
Preceding gene: 126455021
Following gene: 126454561
Centisome position: 23.16
GC content: 72.44
Gene sequence:
>606_bases ATGGATCGCACGACGCTCGACGCATACGATCGCCACGCGGCCGATTACGCACGCGAATGGGACGAACAACCGCCGCCCGA CGACATGTACGTACTGCTCGAACGCTACTTCGAGCCCGGACCCACGGCGGACGTCGGTTGCGGCGCGGGGCGCGACGTCG CCTGGCTCGCGCGTCGCGGCTTCGACGCGTGCGGCTACGACGGCAGCGCATCGCTGATCGCCGAAGCGCGGCGCAGCCAT CCGGCGCTGCGCTTCGAGCAGGCGCTGCTGCCGGCGCTCGCGGGCGCGCCGTCCGGCGCGTTTCGCAACGTGTTGTGCGA GACGGTGATCATGCATTTGCCGGAGTCGGAGGTCGGCGCGGCCGTCGCGCGGCTCGTCGAGCTGCTCGCACCGGGCGGCA CGCTGTATCTGAGTTGGCGGGTGACGGCGGGCGACGCGCAGCGCGACGGGCGCGGACGGCTTTACGCGGCCGTCGACGCC GAGCGGGTGCACGCGGCGCTCGGCGATGCGTGCGACGTGCTGTTCGAGCACGCGCAGACGAGCGAATCGTCCGGCAAGCG CGTGCACCGGCTCGTCGTCAGGCGGCGCGCGGCCGAGGCCGGTTGA
Upstream 100 bases:
>100_bases AACCGCTCGCGAAGCGTGAAATCCCCGTCGCGGTTAACATGACGGCGGCCCACGCCCGCTTCCGCGAGCCGGCGCGTGGC CGCCAACCGAGGAGACGACG
Downstream 100 bases:
>100_bases CGCGGCCCACGGCGCGAACGGCCGGCCGCGCCGACGACCGACGACCGACGGGCCGCGGATGCCCGGGCGTTGCATACGGC GGCCTGGGCCGCCGCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; Sam Dependent Methyltransferase
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MDRTTLDAYDRHAADYAREWDEQPPPDDMYVLLERYFEPGPTADVGCGAGRDVAWLARRGFDACGYDGSASLIAEARRSH PALRFEQALLPALAGAPSGAFRNVLCETVIMHLPESEVGAAVARLVELLAPGGTLYLSWRVTAGDAQRDGRGRLYAAVDA ERVHAALGDACDVLFEHAQTSESSGKRVHRLVVRRRAAEAG
Sequences:
>Translated_201_residues MDRTTLDAYDRHAADYAREWDEQPPPDDMYVLLERYFEPGPTADVGCGAGRDVAWLARRGFDACGYDGSASLIAEARRSH PALRFEQALLPALAGAPSGAFRNVLCETVIMHLPESEVGAAVARLVELLAPGGTLYLSWRVTAGDAQRDGRGRLYAAVDA ERVHAALGDACDVLFEHAQTSESSGKRVHRLVVRRRAAEAG >Mature_201_residues MDRTTLDAYDRHAADYAREWDEQPPPDDMYVLLERYFEPGPTADVGCGAGRDVAWLARRGFDACGYDGSASLIAEARRSH PALRFEQALLPALAGAPSGAFRNVLCETVIMHLPESEVGAAVARLVELLAPGGTLYLSWRVTAGDAQRDGRGRLYAAVDA ERVHAALGDACDVLFEHAQTSESSGKRVHRLVVRRRAAEAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21807; Mature: 21807
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00266 SOMATOTROPIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTTLDAYDRHAADYAREWDEQPPPDDMYVLLERYFEPGPTADVGCGAGRDVAWLARRG CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCC FDACGYDGSASLIAEARRSHPALRFEQALLPALAGAPSGAFRNVLCETVIMHLPESEVGA CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHH AVARLVELLAPGGTLYLSWRVTAGDAQRDGRGRLYAAVDAERVHAALGDACDVLFEHAQT HHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHC SESSGKRVHRLVVRRRAAEAG CCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDRTTLDAYDRHAADYAREWDEQPPPDDMYVLLERYFEPGPTADVGCGAGRDVAWLARRG CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCC FDACGYDGSASLIAEARRSHPALRFEQALLPALAGAPSGAFRNVLCETVIMHLPESEVGA CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHH AVARLVELLAPGGTLYLSWRVTAGDAQRDGRGRLYAAVDAERVHAALGDACDVLFEHAQT HHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHC SESSGKRVHRLVVRRRAAEAG CCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA