| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is estB [H]
Identifier: 126452693
GI number: 126452693
Start: 867013
End: 868209
Strand: Direct
Name: estB [H]
Synonym: BURPS1106A_0884
Alternate gene names: 126452693
Gene position: 867013-868209 (Clockwise)
Preceding gene: 126452160
Following gene: 126453044
Centisome position: 21.74
GC content: 74.77
Gene sequence:
>1197_bases ATGGTTCTTTCATCGTGGTCCGCGCTCGGCGAGCGGGTCGACGCGGCGATCGACGCCGCGCTCGCGCAGCGGCGCCTGGT CGGCGCGGTCGTGCTCGTCGCGCGCCGCGGCGAGCTCGCTTACCGGCGCGCGGCGGGGCTCGCCGATCGCGAGGCCGGCG TGCCGATGCGCGAGGACGCGCTGTTCCGGTTCGCGTCGGTATCGAAGCCGATCGTGTCGGCGGCGGCGATGCGCGCTGTC GCGGCGGGCAAGCTCGATCTCGACGCGAGCATCGCGCGCTGGCTGCCCGCGTTCACGCCCGCGCTGGCCGGCGGCCGCCC CGCGCGCATCACCGCGCGGCAACTGCTGTCGCACACGGCGGGCCTCGGCTACCGTTTTCTCGAAACGCACGCGCACGGCC CGTATGCGCGCGCCGGCGTGTCCGACGGCATGGATTGCGCGGGCATCTCGCTTGCCGAGAACCTGCGCCGCATCGCGAGC GTGCCGCTGCTGTACGAGCCCGGCACGTCGTGGGCGTACTCGCTCGCGACCGACGTGCTCGGCGCGCTGATCGAGGCCGT ATGCGACCAGCCGCTCGAAGACGCGGTGGCCGAGTTCGTGACGACGCCGCTCGGCATGGTCGATACGCGTTTCTACGCGC ACGACGCGGCGCGGCTCGCGGCGGCGTACGTCGATGCGTCGGACGCCGCCGCGCCGGGCGGGCCGCGCCGCATGGCGGCG CTCGAGATCGCATCGCCGTTTCCCGACACGGCCGGCATTCGCTTCGAGCCCGCACGCGCGCTCGATGCGCATGCGTTCGC GTCGGGCGGCGCCGGGATGGTCGGCACCGCGTCCGACGTGCTCGCGCTGATCGAGGCGTTGCGCACCGGCGGCGACGGCT GGCTGCCCGCCGCGCGGATCGACGAGATGGCGCGCATCCAGCCGGGCGCGGAGGATCTGCCGACGGCGCCCGGCTACGGG TTCGGGCTCGGGTTCTCGGTGCTGCGCGATCCGGCCGCCGCGCGATCGCCGGAGTCCGTCGGCACGTGGCGCTGGGGCGG CGCGTATGGCCACGCGTGGTTCGTCGACCGCGCCGCCGGCTTGAGCGTCGTCGCACTCACCAACACGGCTTACGAGGGGA TGTCGGGACGCTTCGTCGCCGACCTGCGCGACGCCGTCTACGGCGCGGGCGCGGCCGCGCAGGAGCGGGCGGCATGA
Upstream 100 bases:
>100_bases TGCGGACTTCAATGTCCGCAGTGTCAGGAACTCTATCCTAGTTTTTCTTCATTCGCCGGCTGCCTACCATGAGCGCTCCA CTCATTTCAGGGGATGCGCC
Downstream 100 bases:
>100_bases GCGATTGCACGACGCGGCCCGCCGGCTTCGCGCGGCCGTCGCGCGAAGCCGCGCGCCTGCCGCTCGCGGGATTGCTCGCG CTCGCGACGGCCGGCTTCAT
Product: putative esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MVLSSWSALGERVDAAIDAALAQRRLVGAVVLVARRGELAYRRAAGLADREAGVPMREDALFRFASVSKPIVSAAAMRAV AAGKLDLDASIARWLPAFTPALAGGRPARITARQLLSHTAGLGYRFLETHAHGPYARAGVSDGMDCAGISLAENLRRIAS VPLLYEPGTSWAYSLATDVLGALIEAVCDQPLEDAVAEFVTTPLGMVDTRFYAHDAARLAAAYVDASDAAAPGGPRRMAA LEIASPFPDTAGIRFEPARALDAHAFASGGAGMVGTASDVLALIEALRTGGDGWLPAARIDEMARIQPGAEDLPTAPGYG FGLGFSVLRDPAAARSPESVGTWRWGGAYGHAWFVDRAAGLSVVALTNTAYEGMSGRFVADLRDAVYGAGAAAQERAA
Sequences:
>Translated_398_residues MVLSSWSALGERVDAAIDAALAQRRLVGAVVLVARRGELAYRRAAGLADREAGVPMREDALFRFASVSKPIVSAAAMRAV AAGKLDLDASIARWLPAFTPALAGGRPARITARQLLSHTAGLGYRFLETHAHGPYARAGVSDGMDCAGISLAENLRRIAS VPLLYEPGTSWAYSLATDVLGALIEAVCDQPLEDAVAEFVTTPLGMVDTRFYAHDAARLAAAYVDASDAAAPGGPRRMAA LEIASPFPDTAGIRFEPARALDAHAFASGGAGMVGTASDVLALIEALRTGGDGWLPAARIDEMARIQPGAEDLPTAPGYG FGLGFSVLRDPAAARSPESVGTWRWGGAYGHAWFVDRAAGLSVVALTNTAYEGMSGRFVADLRDAVYGAGAAAQERAA >Mature_398_residues MVLSSWSALGERVDAAIDAALAQRRLVGAVVLVARRGELAYRRAAGLADREAGVPMREDALFRFASVSKPIVSAAAMRAV AAGKLDLDASIARWLPAFTPALAGGRPARITARQLLSHTAGLGYRFLETHAHGPYARAGVSDGMDCAGISLAENLRRIAS VPLLYEPGTSWAYSLATDVLGALIEAVCDQPLEDAVAEFVTTPLGMVDTRFYAHDAARLAAAYVDASDAAAPGGPRRMAA LEIASPFPDTAGIRFEPARALDAHAFASGGAGMVGTASDVLALIEALRTGGDGWLPAARIDEMARIQPGAEDLPTAPGYG FGLGFSVLRDPAAARSPESVGTWRWGGAYGHAWFVDRAAGLSVVALTNTAYEGMSGRFVADLRDAVYGAGAAAQERAA
Specific function: Acts on short-chain (C4-C6) fatty acid esters and triglycerides, including tertiary alcohol esters. Activity on p- nitrophenyl esters is generally higher than on o-nitrophenyl esters. Lacks beta-lactamase activity; it hydrolyzes the ester bond of cephalos
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
Organism=Escherichia coli, GI87082101, Length=398, Percent_Identity=25.8793969849246, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115533026, Length=298, Percent_Identity=23.8255033557047, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 41392; Mature: 41392
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLSSWSALGERVDAAIDAALAQRRLVGAVVLVARRGELAYRRAAGLADREAGVPMREDA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHCCCCCHHHH LFRFASVSKPIVSAAAMRAVAAGKLDLDASIARWLPAFTPALAGGRPARITARQLLSHTA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GLGYRFLETHAHGPYARAGVSDGMDCAGISLAENLRRIASVPLLYEPGTSWAYSLATDVL CCCHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH GALIEAVCDQPLEDAVAEFVTTPLGMVDTRFYAHDAARLAAAYVDASDAAAPGGPRRMAA HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE LEIASPFPDTAGIRFEPARALDAHAFASGGAGMVGTASDVLALIEALRTGGDGWLPAARI EEECCCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH DEMARIQPGAEDLPTAPGYGFGLGFSVLRDPAAARSPESVGTWRWGGAYGHAWFVDRAAG HHHHHCCCCCHHCCCCCCCCHHCCHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHCCC LSVVALTNTAYEGMSGRFVADLRDAVYGAGAAAQERAA CEEEEEECCHHCCCCCCHHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure MVLSSWSALGERVDAAIDAALAQRRLVGAVVLVARRGELAYRRAAGLADREAGVPMREDA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHCCCCCHHHH LFRFASVSKPIVSAAAMRAVAAGKLDLDASIARWLPAFTPALAGGRPARITARQLLSHTA HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GLGYRFLETHAHGPYARAGVSDGMDCAGISLAENLRRIASVPLLYEPGTSWAYSLATDVL CCCHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH GALIEAVCDQPLEDAVAEFVTTPLGMVDTRFYAHDAARLAAAYVDASDAAAPGGPRRMAA HHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE LEIASPFPDTAGIRFEPARALDAHAFASGGAGMVGTASDVLALIEALRTGGDGWLPAARI EEECCCCCCCCCCEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH DEMARIQPGAEDLPTAPGYGFGLGFSVLRDPAAARSPESVGTWRWGGAYGHAWFVDRAAG HHHHHCCCCCHHCCCCCCCCHHCCHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHCCC LSVVALTNTAYEGMSGRFVADLRDAVYGAGAAAQERAA CEEEEEECCHHCCCCCCHHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11472796; 11847270 [H]