| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452498
Identifier: 126452498
GI number: 126452498
Start: 2695040
End: 2696050
Strand: Reverse
Name: 126452498
Synonym: BURPS1106A_2728
Alternate gene names: NA
Gene position: 2696050-2695040 (Counterclockwise)
Preceding gene: 126451641
Following gene: 126453859
Centisome position: 67.6
GC content: 71.81
Gene sequence:
>1011_bases ATGCAGGACCCGCAGCCCGACGCCCTTCCGCCCGAGCCTTTCGTCGCGCCGGCCGCCGACGGCTTTCCCGTGCGCGGCTT CGCGTGGCGGCATCGCGCGCCCGCCGCGGGCCGGCCGGTGACGGTCATCAATTGCGCGACGTCCGTGCGCTGCCGCTATT ACTTCCGCTTCGCCGCCTATCTGTTCAGCCAGGGCAGCGACGTGCTCGTCTACGACTATCGCGGCATCGGCGAATCGCGG CCCGCGTCGCTCGCCGGTTTTCATGCGACTTGGCTCGACTGGGGCCGTCTCGATTGCGATGCGGTGCTGCAATACGCGGC GCGCACGTGCGCGGGCCAGCCGGTGGACGTCGTCGCGCACAGCGTCGGCGGCGTGGTGCTCGGGCTCGCGGCGTCGAATC CGATCGTGCGGCGCGCGCTCACGGTCGGCGCGCAATATGCGTACTGGCGCGATTACGCGGGCTCGCATCGGCTGAGGATG CTGGCCAAATGGCATGTCGCGATGCCGATGCTCGCGCGCGTGTTCGGCTACGTTCCGGCCAAGCGGCTCGGCTGGATGGA GGACACGCCGCGCGGCGTCGCGCTGTCGTGGAGCCGCAGCCGGCCGCGCTTCGAGGACGCTTACGTGCGTGCGCCGATCC GCGAGACGCCCGACGCGCGGCGCGATCTCGTCGAACGCTTTACGCGCCTCACCGCGCCGATGCTCGCGATCGGCCTGTCG GACGACGAGTTCGGCAGCGTCGAGGCGGTCGAACGTCTGCTCGGCTATTACACGCGCAGCGCGGTCACCCATCTGCGGAT CGCGCCCGAGCAGATCGGTGTGGCGTCGATCGGGCATTTCGCGTTCTTCCACAGCCGCTTCGAGCAGACGCTCTGGCCGA TCGCGCTCGGCTGGCTGAAGACGGGCGCGCTCGCGCCCGAGACGCCGGGCCGGGTTCACCGGCAGCCGTGCGTGCCCGAG CCCGCGCGCGCGGCGCGCGACGAGGCGAGCGGGCGGACGGCCGCCCGCTGA
Upstream 100 bases:
>100_bases CCCGCCGATTCGCAGCCGACCGACAAGAGAAGGGAATCGCGCGGACGCATTGTGCGATCGCGCGGCGCGCCATCTCGACA TAACCATGAGAGGAGACGAT
Downstream 100 bases:
>100_bases GCGGCGCGAGACGCGCGGCGGCCGCCGCCGGCTGCGTTCGGCGCGCGCGAAGATCCGTTACCATCGAACGCTTTCCACCG CCTGCACGACGTGTGTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase-Like Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold Family Protein; Family; Dehydrogenase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MQDPQPDALPPEPFVAPAADGFPVRGFAWRHRAPAAGRPVTVINCATSVRCRYYFRFAAYLFSQGSDVLVYDYRGIGESR PASLAGFHATWLDWGRLDCDAVLQYAARTCAGQPVDVVAHSVGGVVLGLAASNPIVRRALTVGAQYAYWRDYAGSHRLRM LAKWHVAMPMLARVFGYVPAKRLGWMEDTPRGVALSWSRSRPRFEDAYVRAPIRETPDARRDLVERFTRLTAPMLAIGLS DDEFGSVEAVERLLGYYTRSAVTHLRIAPEQIGVASIGHFAFFHSRFEQTLWPIALGWLKTGALAPETPGRVHRQPCVPE PARAARDEASGRTAAR
Sequences:
>Translated_336_residues MQDPQPDALPPEPFVAPAADGFPVRGFAWRHRAPAAGRPVTVINCATSVRCRYYFRFAAYLFSQGSDVLVYDYRGIGESR PASLAGFHATWLDWGRLDCDAVLQYAARTCAGQPVDVVAHSVGGVVLGLAASNPIVRRALTVGAQYAYWRDYAGSHRLRM LAKWHVAMPMLARVFGYVPAKRLGWMEDTPRGVALSWSRSRPRFEDAYVRAPIRETPDARRDLVERFTRLTAPMLAIGLS DDEFGSVEAVERLLGYYTRSAVTHLRIAPEQIGVASIGHFAFFHSRFEQTLWPIALGWLKTGALAPETPGRVHRQPCVPE PARAARDEASGRTAAR >Mature_336_residues MQDPQPDALPPEPFVAPAADGFPVRGFAWRHRAPAAGRPVTVINCATSVRCRYYFRFAAYLFSQGSDVLVYDYRGIGESR PASLAGFHATWLDWGRLDCDAVLQYAARTCAGQPVDVVAHSVGGVVLGLAASNPIVRRALTVGAQYAYWRDYAGSHRLRM LAKWHVAMPMLARVFGYVPAKRLGWMEDTPRGVALSWSRSRPRFEDAYVRAPIRETPDARRDLVERFTRLTAPMLAIGLS DDEFGSVEAVERLLGYYTRSAVTHLRIAPEQIGVASIGHFAFFHSRFEQTLWPIALGWLKTGALAPETPGRVHRQPCVPE PARAARDEASGRTAAR
Specific function: Unknown
COG id: COG4757
COG function: function code R; Predicted alpha/beta hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37250; Mature: 37250
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDPQPDALPPEPFVAPAADGFPVRGFAWRHRAPAAGRPVTVINCATSVRCRYYFRFAAY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH LFSQGSDVLVYDYRGIGESRPASLAGFHATWLDWGRLDCDAVLQYAARTCAGQPVDVVAH HHCCCCCEEEEECCCCCCCCCCCHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH SVGGVVLGLAASNPIVRRALTVGAQYAYWRDYAGSHRLRMLAKWHVAMPMLARVFGYVPA HHCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCH KRLGWMEDTPRGVALSWSRSRPRFEDAYVRAPIRETPDARRDLVERFTRLTAPMLAIGLS HHCCCCCCCCCCEEEEECCCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHEEECC DDEFGSVEAVERLLGYYTRSAVTHLRIAPEQIGVASIGHFAFFHSRFEQTLWPIALGWLK CCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TGALAPETPGRVHRQPCVPEPARAARDEASGRTAAR CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MQDPQPDALPPEPFVAPAADGFPVRGFAWRHRAPAAGRPVTVINCATSVRCRYYFRFAAY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH LFSQGSDVLVYDYRGIGESRPASLAGFHATWLDWGRLDCDAVLQYAARTCAGQPVDVVAH HHCCCCCEEEEECCCCCCCCCCCHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH SVGGVVLGLAASNPIVRRALTVGAQYAYWRDYAGSHRLRMLAKWHVAMPMLARVFGYVPA HHCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCH KRLGWMEDTPRGVALSWSRSRPRFEDAYVRAPIRETPDARRDLVERFTRLTAPMLAIGLS HHCCCCCCCCCCEEEEECCCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHEEECC DDEFGSVEAVERLLGYYTRSAVTHLRIAPEQIGVASIGHFAFFHSRFEQTLWPIALGWLK CCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TGALAPETPGRVHRQPCVPEPARAARDEASGRTAAR CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA