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The map label for this gene is fliC [H]

Identifier: 126452490

GI number: 126452490

Start: 3856109

End: 3857275

Strand: Direct

Name: fliC [H]

Synonym: BURPS1106A_3952

Alternate gene names: 126452490

Gene position: 3856109-3857275 (Clockwise)

Preceding gene: 126452769

Following gene: 126451618

Centisome position: 96.68

GC content: 65.47

Gene sequence:

>1167_bases
ATGCTCGGAATCAACAGCAACATTAACTCGTTGGTCGCTCAACAGAACCTCAACGGCTCGCAAGGCGCCCTGTCCCAAGC
GATCACCCGCCTGTCGTCGGGCAAGCGCATCAACAGCGCGGCGGACGATGCGGCCGGCCTCGCGATCGCCACCCGGATGC
AAACGCAGATCAACGGCCTGAACCAGGGCGTGTCGAACGCGAACGACGGCGTGTCGATCCTGCAAACGGCATCGAGCGGC
CTGACCTCGCTCACCAACAGCCTGCAGCGTATCCGCCAGCTCGCCGTGCAGGCCTCGAACGGCCCGCTGAGCGCGAGCGA
CGCGTCGGCGCTGCAACAGGAAGTCGCGCAGCAGATCTCGGAAGTGAACCGTATCGCTTCGCAGACGAACTACAACGGCA
AGAACATCCTCGACGGCTCGGCAGGCACGCTGAGCTTCCAGGTCGGCGCGAACGTCGGCCAGACGGTCTCCGTCGACCTC
ACGCAAAGCATGTCGGCGGCGAAGATCGGCGGCGGCATGGTTCAGACGGGCCAGACGCTCGGCACGATCAAGGTGGCGAT
CGACTCGAGCGGCGCGGCCTGGTCGTCGGGCAGCACCGGCCAGGAGACGACGCAGATCAACGTCGTGTCGGACGGCAAGG
GCGGCTTCACGTTCACCGATCAGAACAACCAGGCGCTGTCGTCGACGGCCGTGACCGCCGTGTTCGGCTCGTCGACCGCC
GGCACGGGCACGGCGGCCTCGCCGTCGTTCCAGACGCTGGCGCTGTCGACTTCGGCAACCAGCGCGCTGTCCGCGACGGA
CCAGGCGAACGCCACGGCGATGGTTGCGCAGATCAACGCGGTCAACAAGCCGCAAACGGTCTCGAACCTCGACATCAGCA
CGCAGACGGGCGCGTACCAGGCGATGGTATCGATCGACAACGCACTCGCGACGGTCAACAATCTGCAGGCAACGCTCGGC
GCGGCGCAAAACCGCTTCACCGCGATCGCGACGACGCAGCAAGCCGGCTCGAACAACCTCGCGCAGGCGCAATCGCAAAT
CCAGAGCGCGGACTTTGCTCAGGAAACCGCGAACCTGTCGCGCGCGCAAGTGCTCCAGCAAGCCGGCATCTCGGTGCTCG
CGCAAGCGAACTCGCTGCCGCAGCAAGTGCTGAAGCTCCTGCAATAA

Upstream 100 bases:

>100_bases
ACGCCGAAATCCTGCACAAGGCGGCCGGCAAAGAACGAGTGCTTCCGCCCGCGCCAATAGTGGCATTGATGGGCTTATAC
AGCTCAATTTGGAGATTTTC

Downstream 100 bases:

>100_bases
CGTGTACCGAACGACGGGCCGCGCTGCCAGGCGGCCCGCCTTTGTGCGGCGGAGCAACACCCTCGTGGCCGCCGCACGTT
TTTGCTTTCTGATTCTTCCG

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGLNQGVSNANDGVSILQTASSG
LTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQISEVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDL
TQSMSAAKIGGGMVQTGQTLGTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTA
GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQAMVSIDNALATVNNLQATLG
AAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRAQVLQQAGISVLAQANSLPQQVLKLLQ

Sequences:

>Translated_388_residues
MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGLNQGVSNANDGVSILQTASSG
LTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQISEVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDL
TQSMSAAKIGGGMVQTGQTLGTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTA
GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQAMVSIDNALATVNNLQATLG
AAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRAQVLQQAGISVLAQANSLPQQVLKLLQ
>Mature_388_residues
MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGLNQGVSNANDGVSILQTASSG
LTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQISEVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDL
TQSMSAAKIGGGMVQTGQTLGTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTA
GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQAMVSIDNALATVNNLQATLG
AAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLSRAQVLQQAGISVLAQANSLPQQVLKLLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=159, Percent_Identity=50.314465408805, Blast_Score=154, Evalue=8e-39,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 39257; Mature: 39257

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTL
HHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCEEEEEHHHCCHHHHHCCCCEECCCCE
GTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTA
EEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHEEEEECCCCC
GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQ
CCCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCHHH
AMVSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLS
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
RAQVLQQAGISVLAQANSLPQQVLKLLQ
HHHHHHHHCHHHHHHHCCCHHHHHHHHC
>Mature Secondary Structure
MLGINSNINSLVAQQNLNGSQGALSQAITRLSSGKRINSAADDAAGLAIATRMQTQINGL
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NQGVSNANDGVSILQTASSGLTSLTNSLQRIRQLAVQASNGPLSASDASALQQEVAQQIS
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
EVNRIASQTNYNGKNILDGSAGTLSFQVGANVGQTVSVDLTQSMSAAKIGGGMVQTGQTL
HHHHHHHHCCCCCCEEECCCCCEEEEEECCCCCCEEEEEHHHCCHHHHHCCCCEECCCCE
GTIKVAIDSSGAAWSSGSTGQETTQINVVSDGKGGFTFTDQNNQALSSTAVTAVFGSSTA
EEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCHHHHHHEEEEECCCCC
GTGTAASPSFQTLALSTSATSALSATDQANATAMVAQINAVNKPQTVSNLDISTQTGAYQ
CCCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCHHH
AMVSIDNALATVNNLQATLGAAQNRFTAIATTQQAGSNNLAQAQSQIQSADFAQETANLS
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
RAQVLQQAGISVLAQANSLPQQVLKLLQ
HHHHHHHHCHHHHHHHCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2123866; 9620973; 7682214 [H]