| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is qor [H]
Identifier: 126452470
GI number: 126452470
Start: 1222592
End: 1223566
Strand: Direct
Name: qor [H]
Synonym: BURPS1106A_1245
Alternate gene names: 126452470
Gene position: 1222592-1223566 (Clockwise)
Preceding gene: 126453334
Following gene: 126453780
Centisome position: 30.65
GC content: 69.03
Gene sequence:
>975_bases ATGCCGAAGGCAATTCGTTACGACCAGCCGGGCGGCCCGGAAGTCATGAAATGGGTCGACATCGACGTCGGCGCGCCGCA GCCGGGCGAAGTCCGCATCAAGCAGCACGCGGTCGGCCTGAACTACATCGACGTCTATTTCCGCACCGGCCTGTATCCGC AACCGCTGCCGGGCGGTCTCGGCATGGAGGCGGCGGGCGAGGTCACGGAGCTCGGCGAAGGCGTGACGGCGCTCAAGCCG GGCGACCGCGTCGCGTATGTCGCGCAGCCGCCGGGCGCATACGCGCAGGAGCGCGTGCTGGCCGCCGCGAAGCTCGTGAA GCTGCCGGAGGCCATCGGCTACGAGGACGCGGCGTCGGCGATGCTGCAGGGCCTGACCGCGCAATATCTGCTGCGTCGCA CGTACAAGGTCGAGCCGGGCGACACGATCGTCATTCACGCGGCGGCGGGCGGCGTGGGCCTGCTCGTCTGCCAGTGGGCG AAGGCGCTCGGCGCGACGGTGATCGGCACGGTCGGCTCCGACGAGAAGGCCGCGCTCGCGAAGGCGCACGGCTGCGATCA CCCGATCGTCTACACGCGCGAGAACTTCACCGAACGCGTGAAGGAGATCACGAACGGCGCGGGCGTGCCGGTGGTCTACG ATTCGATCGGCAAGGACACGTACATCGGCTCGCTCGACTGTCTCGCGCCGCTCGGCATGTTCGTGAGCTTCGGCAACGCG TCCGGGCCGCTGCCGCCGATCGACTCGAAGGAGTTCTCGTCGCGCGGCTCGCTGTTCTTCACGCGGCCGACGTTGTTCTC GTACATCGCCAAGCGCGAGGATCTCGATCGCAACGCGGCCGAGCTGTTCGACGTGCTCGCGTCCGGCCGCGTGAAGACGA GCATCCGGCAGCGCTATCCGCTCGAGAACGTCGCGCAGGCGCACCGCGACCTCGAGGCGCGGCGCACCACGGGCTCGACG GTCCTGCTGCCCTGA
Upstream 100 bases:
>100_bases CGGGCGCAGCGCTCGTCCACGCATGGCGCGCGCCCGCGCATCACCCGAGGGCGCGGGCCGATTCCGAACTCAACGCACAT CGCAACCAGGAGAAGCCAGC
Downstream 100 bases:
>100_bases GCCTCATGCGGCCGCGGGCGCGCCGCGGCCGGGCCCGCGCGCGCATCGCGCGCCGCGTGCCGGCTCGTTCGCCGGCCGCG CGCGAACGAGCCAGCGCCGC
Product: zinc-binding dehydrogenase family oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MPKAIRYDQPGGPEVMKWVDIDVGAPQPGEVRIKQHAVGLNYIDVYFRTGLYPQPLPGGLGMEAAGEVTELGEGVTALKP GDRVAYVAQPPGAYAQERVLAAAKLVKLPEAIGYEDAASAMLQGLTAQYLLRRTYKVEPGDTIVIHAAAGGVGLLVCQWA KALGATVIGTVGSDEKAALAKAHGCDHPIVYTRENFTERVKEITNGAGVPVVYDSIGKDTYIGSLDCLAPLGMFVSFGNA SGPLPPIDSKEFSSRGSLFFTRPTLFSYIAKREDLDRNAAELFDVLASGRVKTSIRQRYPLENVAQAHRDLEARRTTGST VLLP
Sequences:
>Translated_324_residues MPKAIRYDQPGGPEVMKWVDIDVGAPQPGEVRIKQHAVGLNYIDVYFRTGLYPQPLPGGLGMEAAGEVTELGEGVTALKP GDRVAYVAQPPGAYAQERVLAAAKLVKLPEAIGYEDAASAMLQGLTAQYLLRRTYKVEPGDTIVIHAAAGGVGLLVCQWA KALGATVIGTVGSDEKAALAKAHGCDHPIVYTRENFTERVKEITNGAGVPVVYDSIGKDTYIGSLDCLAPLGMFVSFGNA SGPLPPIDSKEFSSRGSLFFTRPTLFSYIAKREDLDRNAAELFDVLASGRVKTSIRQRYPLENVAQAHRDLEARRTTGST VLLP >Mature_323_residues PKAIRYDQPGGPEVMKWVDIDVGAPQPGEVRIKQHAVGLNYIDVYFRTGLYPQPLPGGLGMEAAGEVTELGEGVTALKPG DRVAYVAQPPGAYAQERVLAAAKLVKLPEAIGYEDAASAMLQGLTAQYLLRRTYKVEPGDTIVIHAAAGGVGLLVCQWAK ALGATVIGTVGSDEKAALAKAHGCDHPIVYTRENFTERVKEITNGAGVPVVYDSIGKDTYIGSLDCLAPLGMFVSFGNAS GPLPPIDSKEFSSRGSLFFTRPTLFSYIAKREDLDRNAAELFDVLASGRVKTSIRQRYPLENVAQAHRDLEARRTTGSTV LLP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=331, Percent_Identity=31.7220543806647, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI13236495, Length=331, Percent_Identity=31.7220543806647, Blast_Score=145, Evalue=4e-35, Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=33.3333333333333, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=33.3333333333333, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI18379349, Length=313, Percent_Identity=29.7124600638978, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI194239676, Length=329, Percent_Identity=29.7872340425532, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI28557745, Length=226, Percent_Identity=33.1858407079646, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI24308257, Length=323, Percent_Identity=27.2445820433437, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI197927207, Length=192, Percent_Identity=30.2083333333333, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI67078404, Length=173, Percent_Identity=31.7919075144509, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI41872631, Length=239, Percent_Identity=30.5439330543933, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI47519420, Length=334, Percent_Identity=26.9461077844311, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI67078406, Length=122, Percent_Identity=34.4262295081967, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=47.7064220183486, Blast_Score=311, Evalue=5e-86, Organism=Escherichia coli, GI87081918, Length=324, Percent_Identity=26.8518518518519, Blast_Score=64, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17507255, Length=303, Percent_Identity=26.4026402640264, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17556000, Length=274, Percent_Identity=27.007299270073, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=324, Percent_Identity=38.5802469135802, Blast_Score=214, Evalue=1e-56, Organism=Drosophila melanogaster, GI45550423, Length=314, Percent_Identity=24.8407643312102, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI221330659, Length=211, Percent_Identity=29.8578199052133, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI19920632, Length=211, Percent_Identity=29.8578199052133, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34729; Mature: 34598
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKAIRYDQPGGPEVMKWVDIDVGAPQPGEVRIKQHAVGLNYIDVYFRTGLYPQPLPGGL CCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEHHCCCCCEEEHHHCCCCCCCCCCCC GMEAAGEVTELGEGVTALKPGDRVAYVAQPPGAYAQERVLAAAKLVKLPEAIGYEDAASA CCCCCCCHHHHCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH MLQGLTAQYLLRRTYKVEPGDTIVIHAAAGGVGLLVCQWAKALGATVIGTVGSDEKAALA HHHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHH KAHGCDHPIVYTRENFTERVKEITNGAGVPVVYDSIGKDTYIGSLDCLAPLGMFVSFGNA HHCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCC SGPLPPIDSKEFSSRGSLFFTRPTLFSYIAKREDLDRNAAELFDVLASGRVKTSIRQRYP CCCCCCCCCHHHCCCCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCC LENVAQAHRDLEARRTTGSTVLLP HHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure PKAIRYDQPGGPEVMKWVDIDVGAPQPGEVRIKQHAVGLNYIDVYFRTGLYPQPLPGGL CCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEHHCCCCCEEEHHHCCCCCCCCCCCC GMEAAGEVTELGEGVTALKPGDRVAYVAQPPGAYAQERVLAAAKLVKLPEAIGYEDAASA CCCCCCCHHHHCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH MLQGLTAQYLLRRTYKVEPGDTIVIHAAAGGVGLLVCQWAKALGATVIGTVGSDEKAALA HHHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHH KAHGCDHPIVYTRENFTERVKEITNGAGVPVVYDSIGKDTYIGSLDCLAPLGMFVSFGNA HHCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCC SGPLPPIDSKEFSSRGSLFFTRPTLFSYIAKREDLDRNAAELFDVLASGRVKTSIRQRYP CCCCCCCCCHHHCCCCCEEEECHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCC LENVAQAHRDLEARRTTGSTVLLP HHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]