Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126452417

Identifier: 126452417

GI number: 126452417

Start: 3546493

End: 3547458

Strand: Direct

Name: 126452417

Synonym: BURPS1106A_3647

Alternate gene names: NA

Gene position: 3546493-3547458 (Clockwise)

Preceding gene: 126453820

Following gene: 126453276

Centisome position: 88.92

GC content: 58.49

Gene sequence:

>966_bases
TTGAATCCTGGTTTAATTCGCCGCAATAATATTGTCCCGGCCTACGCGGAAGCAGGCCTGATTCTAAGTTCAAGCATTGC
AAATTACAATCGATTCCATATTCCGGGGTTTTCTTTGATTGCCGTCGTTCTAGTCGCCTATTTCGCCGTCGCCGTGCTCG
CTGCGGCGCTGCTGTTATTACCGGCAGTGCGCACGACGGTATTCGATTCGGTCGCCCAATTCCACGGCCGAATCAGCCGG
CGCGCATCCGATCGCGCGGCCCGGGCGCGCGAGCATCTCGCGCAATCGGCAAGAATGTCGCGCTCCACTTTAAGCGGCGT
GCAAAATTTACTAGTTCGGCGGCGCTTGCTGATTGCGACCACGACAGGTATTCTTGCGACGCCTCCATTGATTGCTATCG
CGTTACGCGGTCGGCAACTATTCCAATACGACGACACATTGCGTGTCCCGGACGAGAAAATCGCCGCGCTTTTAAAAGGC
GAGCAGCTCGTCCCGCCGCTGCCGCTGCCGCCCGAAGTCTTCGCCACGCGCGAGGTCGAGCAGGTCAGGCCCGCGCTGAA
GGACGCAAGCCGCGATTGGAATTTGCTCGATACCGATTTCAGAACGCGCCTGTTGCTCGTCTACAAGATCATGCGCGAGC
AGCACGGCTATGAAATGGCGCTGCTCGAAGGCTATCGCAGCCCCGAGCGGCAAAACCGATTGGCGCAGATGGGCAGCAAC
GTCACCAATGCGGCGGCGTTCCAGAGTTATCACCAATACGGACTGGCGGCCGACAACGCGTTCCTGCGCGACGGCAAGCT
CGTCATCTCGGAAAAAGATCCGTGGGCCATGCGAGGCTATCAGTTGTACGGACAAGTCGCCGAAGAGGTCGGCTTGACCT
GGGGTGGCCGATGGAAAATGATGGACCTCGGACACGTCGAATACCATAAGCCCGGCTTCAAGCTCGGGCGCTCGTCCGCG
CGATAA

Upstream 100 bases:

>100_bases
CGCGAGTGGTTTGCGCCGCTCCCTTTGCCGGCATCGGAGGAAAGCAGGCTAGGCGGGGCTTTCGAATTCGAATCGTCCGG
CGCGCTCATTCAGTGTCTCG

Downstream 100 bases:

>100_bases
AGGACGAGCAGTAAATAATGAGGGCGGTATGGGGCTACCAGACATCGCGACGGGATCACAATCCGGCATTCACTCGATCG
GCGCGCGCGGCTCAGCGAGC

Product: D-alanyl-D-alanine carboxypeptidase family protein

Products: NA

Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase Family; Transmembrane Protein; LysM Domain-Containing Protein; Subfamily; D-Alanyl-D-Alanine Carboxypeptidase Family Protein

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNPGLIRRNNIVPAYAEAGLILSSSIANYNRFHIPGFSLIAVVLVAYFAVAVLAAALLLLPAVRTTVFDSVAQFHGRISR
RASDRAARAREHLAQSARMSRSTLSGVQNLLVRRRLLIATTTGILATPPLIAIALRGRQLFQYDDTLRVPDEKIAALLKG
EQLVPPLPLPPEVFATREVEQVRPALKDASRDWNLLDTDFRTRLLLVYKIMREQHGYEMALLEGYRSPERQNRLAQMGSN
VTNAAAFQSYHQYGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEEVGLTWGGRWKMMDLGHVEYHKPGFKLGRSSA
R

Sequences:

>Translated_321_residues
MNPGLIRRNNIVPAYAEAGLILSSSIANYNRFHIPGFSLIAVVLVAYFAVAVLAAALLLLPAVRTTVFDSVAQFHGRISR
RASDRAARAREHLAQSARMSRSTLSGVQNLLVRRRLLIATTTGILATPPLIAIALRGRQLFQYDDTLRVPDEKIAALLKG
EQLVPPLPLPPEVFATREVEQVRPALKDASRDWNLLDTDFRTRLLLVYKIMREQHGYEMALLEGYRSPERQNRLAQMGSN
VTNAAAFQSYHQYGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEEVGLTWGGRWKMMDLGHVEYHKPGFKLGRSSA
R
>Mature_321_residues
MNPGLIRRNNIVPAYAEAGLILSSSIANYNRFHIPGFSLIAVVLVAYFAVAVLAAALLLLPAVRTTVFDSVAQFHGRISR
RASDRAARAREHLAQSARMSRSTLSGVQNLLVRRRLLIATTTGILATPPLIAIALRGRQLFQYDDTLRVPDEKIAALLKG
EQLVPPLPLPPEVFATREVEQVRPALKDASRDWNLLDTDFRTRLLLVYKIMREQHGYEMALLEGYRSPERQNRLAQMGSN
VTNAAAFQSYHQYGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEEVGLTWGGRWKMMDLGHVEYHKPGFKLGRSSA
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35907; Mature: 35907

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPGLIRRNNIVPAYAEAGLILSSSIANYNRFHIPGFSLIAVVLVAYFAVAVLAAALLLL
CCCCCEECCCCCCHHHHCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
PAVRTTVFDSVAQFHGRISRRASDRAARAREHLAQSARMSRSTLSGVQNLLVRRRLLIAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TTGILATPPLIAIALRGRQLFQYDDTLRVPDEKIAALLKGEQLVPPLPLPPEVFATREVE
CCCHHHCCHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
QVRPALKDASRDWNLLDTDFRTRLLLVYKIMREQHGYEMALLEGYRSPERQNRLAQMGSN
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCHHHHHHHHHHCCC
VTNAAAFQSYHQYGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEEVGLTWGGRWKM
CHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
MDLGHVEYHKPGFKLGRSSAR
EECCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MNPGLIRRNNIVPAYAEAGLILSSSIANYNRFHIPGFSLIAVVLVAYFAVAVLAAALLLL
CCCCCEECCCCCCHHHHCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
PAVRTTVFDSVAQFHGRISRRASDRAARAREHLAQSARMSRSTLSGVQNLLVRRRLLIAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TTGILATPPLIAIALRGRQLFQYDDTLRVPDEKIAALLKGEQLVPPLPLPPEVFATREVE
CCCHHHCCHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
QVRPALKDASRDWNLLDTDFRTRLLLVYKIMREQHGYEMALLEGYRSPERQNRLAQMGSN
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCHHHHHHHHHHCCC
VTNAAAFQSYHQYGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEEVGLTWGGRWKM
CHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
MDLGHVEYHKPGFKLGRSSAR
EECCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA