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The map label for this gene is pqiA [H]

Identifier: 126452396

GI number: 126452396

Start: 3290873

End: 3291535

Strand: Direct

Name: pqiA [H]

Synonym: BURPS1106A_3373

Alternate gene names: 126452396

Gene position: 3290873-3291535 (Clockwise)

Preceding gene: 126451556

Following gene: 126453320

Centisome position: 82.51

GC content: 68.48

Gene sequence:

>663_bases
ATGACCGGCATCGTCACCGCCGCGCGCGCCGGCATGGCGAGCTGCCATGCGTGCGGCCACGTGCAGAAGCTCGCGCGGCC
GGCTCAGCAGGCGCTCGGCTCGCACGACAGGCCCGAGCGTTGCGCGCGCTGCGGCGCCGCGCTGCACCTGCGCACGCCGG
ACAGCATCGCGCGCACGCTCGCGCTGCTGATCGCCGCCGCGATCCTCTACATTCCGGCGAACCTGCTGCCGATCATGCGC
ACCACGTCGATCGTCGGCTCGCAGGAAGACACGATCATGAGCGGCGTCGTCTATTTCTGGACGTCGGGCGAATGGCCGCT
CGCCGTGGTCGTGTTCGTCGCGAGCATTCTCGTGCCGATGATGAAGCTCGGCGTGCTCGCGATCCTCGTCTACACCGCGC
AGCGCCGCTCCGCGTGGCGGCCGATGCAGCGCACCCGGCTCTACCGGATCGTCGAGCGGATCGGGCGCTGGTCGATGCTC
GACATCTTCGTCGTCACGCTCACCGTCGCGCTCGTCCATTTCCGCTCGCTCGCCGTGATCACGGCGGGCCCCGGCGCGCT
CGCGTTCGGCTCCGTCGTGATCCTGACGATGCTCGCGTCGATGCAGTTCGACCCGCGCCTCATCTGGGACAACGTAGAAC
ACTCAGGGAATGCTCATGAATAG

Upstream 100 bases:

>100_bases
TCGTGATGTTCGATCCGCGCACGCTGTGGGACATCGCCGATTCGCTGCGCGAGCGCGCGGCCGGCGCGGCGCCCGGCTCG
GCCGACGAGTCGAGCGCGCG

Downstream 100 bases:

>100_bases
ACCGCAAGGCCCGCAACACGACCCGAACGCGGCCCCTCCCACCCCGCCCGGCGGCGAGCCGCCCGTACTGCCCGAGCCCG
TGATCACGCGTCGCTCCGGG

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTGIVTAARAGMASCHACGHVQKLARPAQQALGSHDRPERCARCGAALHLRTPDSIARTLALLIAAAILYIPANLLPIMR
TTSIVGSQEDTIMSGVVYFWTSGEWPLAVVVFVASILVPMMKLGVLAILVYTAQRRSAWRPMQRTRLYRIVERIGRWSML
DIFVVTLTVALVHFRSLAVITAGPGALAFGSVVILTMLASMQFDPRLIWDNVEHSGNAHE

Sequences:

>Translated_220_residues
MTGIVTAARAGMASCHACGHVQKLARPAQQALGSHDRPERCARCGAALHLRTPDSIARTLALLIAAAILYIPANLLPIMR
TTSIVGSQEDTIMSGVVYFWTSGEWPLAVVVFVASILVPMMKLGVLAILVYTAQRRSAWRPMQRTRLYRIVERIGRWSML
DIFVVTLTVALVHFRSLAVITAGPGALAFGSVVILTMLASMQFDPRLIWDNVEHSGNAHE
>Mature_219_residues
TGIVTAARAGMASCHACGHVQKLARPAQQALGSHDRPERCARCGAALHLRTPDSIARTLALLIAAAILYIPANLLPIMRT
TSIVGSQEDTIMSGVVYFWTSGEWPLAVVVFVASILVPMMKLGVLAILVYTAQRRSAWRPMQRTRLYRIVERIGRWSMLD
IFVVTLTVALVHFRSLAVITAGPGALAFGSVVILTMLASMQFDPRLIWDNVEHSGNAHE

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=217, Percent_Identity=39.63133640553, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1788137, Length=186, Percent_Identity=43.5483870967742, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 24016; Mature: 23885

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIVTAARAGMASCHACGHVQKLARPAQQALGSHDRPERCARCGAALHLRTPDSIARTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCHHHHHHHH
ALLIAAAILYIPANLLPIMRTTSIVGSQEDTIMSGVVYFWTSGEWPLAVVVFVASILVPM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH
MKLGVLAILVYTAQRRSAWRPMQRTRLYRIVERIGRWSMLDIFVVTLTVALVHFRSLAVI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEE
TAGPGALAFGSVVILTMLASMQFDPRLIWDNVEHSGNAHE
ECCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure 
TGIVTAARAGMASCHACGHVQKLARPAQQALGSHDRPERCARCGAALHLRTPDSIARTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCHHHHHHHH
ALLIAAAILYIPANLLPIMRTTSIVGSQEDTIMSGVVYFWTSGEWPLAVVVFVASILVPM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH
MKLGVLAILVYTAQRRSAWRPMQRTRLYRIVERIGRWSMLDIFVVTLTVALVHFRSLAVI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEE
TAGPGALAFGSVVILTMLASMQFDPRLIWDNVEHSGNAHE
ECCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]