| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452343
Identifier: 126452343
GI number: 126452343
Start: 657330
End: 657788
Strand: Direct
Name: 126452343
Synonym: BURPS1106A_0681
Alternate gene names: NA
Gene position: 657330-657788 (Clockwise)
Preceding gene: 126453798
Following gene: 126451504
Centisome position: 16.48
GC content: 66.45
Gene sequence:
>459_bases GTGAAGGAATTGACGATGGATTGCGTATTCTGCCGCGAAGACGGCGGCGAAGTGCTCTGGAAGGACGATGCGGTGCGCGT CGTCCTCGCGACGACCGAGACCGATTACCCGGGCTTCTGCCGGGTGATCTGGCATGCGCACGTCGCCGAGTTTTCCGATC TCGACGAGGCCGAGCGCGCGCATCTGATGCGGATCGTCTACGCGGTCGAGAAGGCGGTGCGGCGCGTGATGCAGCCGACG AAGGTGAATCTCGCGAGCCTCGGCAACCAGGTGCCGCACGTGCACTGGCACGTGATTCCGCGCTTCTCGAACGACGCGCA TTATCCGCAGCCGATCTGGGCGCCGCGTCAGCGGTCGGTGTCCGACGCGCTGCTGCGGCTGCGCGCCGCGCAGGCGACCC TTCTGCACAACGCGGTGCACGAGGAAATCGAGCAGGCGGTGAGCGGAGGCCGCGCATGA
Upstream 100 bases:
>100_bases CGTCACATGCTCGGCGAAAACTGGATGGCCGACTACGTCGCGCGCGCGAACAACGGCGGGATCGAGCGCGTGCTGGTGTA AGGTGACGAACGTTCCACCA
Downstream 100 bases:
>100_bases GCGGGCAGGCGGCTGCAGCGCCCGTGCCGTCCGGCATCGTCGTGCACGCGGTGTCGCGCGTGCTCGAGCTGCAGTATCCG AGCGGCGAGTGCTTTCGCGT
Product: HIT domain-containing protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Protein; HIT Family Hydrolase; Diadenosine Tetraphosphate Hydrolase; Histidine Triad-Like; Histidine Triad Family Hydrolase; HIT Hydrolase; HIT Domain-Containing Protein; HIT Domain-Containing
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKELTMDCVFCREDGGEVLWKDDAVRVVLATTETDYPGFCRVIWHAHVAEFSDLDEAERAHLMRIVYAVEKAVRRVMQPT KVNLASLGNQVPHVHWHVIPRFSNDAHYPQPIWAPRQRSVSDALLRLRAAQATLLHNAVHEEIEQAVSGGRA
Sequences:
>Translated_152_residues MKELTMDCVFCREDGGEVLWKDDAVRVVLATTETDYPGFCRVIWHAHVAEFSDLDEAERAHLMRIVYAVEKAVRRVMQPT KVNLASLGNQVPHVHWHVIPRFSNDAHYPQPIWAPRQRSVSDALLRLRAAQATLLHNAVHEEIEQAVSGGRA >Mature_152_residues MKELTMDCVFCREDGGEVLWKDDAVRVVLATTETDYPGFCRVIWHAHVAEFSDLDEAERAHLMRIVYAVEKAVRRVMQPT KVNLASLGNQVPHVHWHVIPRFSNDAHYPQPIWAPRQRSVSDALLRLRAAQATLLHNAVHEEIEQAVSGGRA
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17273; Mature: 17273
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELTMDCVFCREDGGEVLWKDDAVRVVLATTETDYPGFCRVIWHAHVAEFSDLDEAERA CCCCCEEEEEEECCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHH HLMRIVYAVEKAVRRVMQPTKVNLASLGNQVPHVHWHVIPRFSNDAHYPQPIWAPRQRSV HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCH SDALLRLRAAQATLLHNAVHEEIEQAVSGGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKELTMDCVFCREDGGEVLWKDDAVRVVLATTETDYPGFCRVIWHAHVAEFSDLDEAERA CCCCCEEEEEEECCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHH HLMRIVYAVEKAVRRVMQPTKVNLASLGNQVPHVHWHVIPRFSNDAHYPQPIWAPRQRSV HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCH SDALLRLRAAQATLLHNAVHEEIEQAVSGGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA