| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451504
Identifier: 126451504
GI number: 126451504
Start: 657785
End: 658198
Strand: Direct
Name: 126451504
Synonym: BURPS1106A_0682
Alternate gene names: NA
Gene position: 657785-658198 (Clockwise)
Preceding gene: 126452343
Following gene: 126454075
Centisome position: 16.49
GC content: 69.32
Gene sequence:
>414_bases ATGAGCGGGCAGGCGGCTGCAGCGCCCGTGCCGTCCGGCATCGTCGTGCACGCGGTGTCGCGCGTGCTCGAGCTGCAGTA TCCGAGCGGCGAGTGCTTTCGCGTGCCGTTCGAGCTGATGCGCGTGTATTCGCCGTCGGCCGAGGTGCGCGGTCACGGTC CCGGCCAGGAGACGCTGCAGACCGGCAAGCGCGAGGTGACCGTCACGGCGCTCGAGCCGGTCGGCAATTACGCGCTCAAG CCGACGTTCTCGGACGGCCATTCGACGGGCATCTACTCATGGGCGCTGCTGTACGAGCTCGCGACCCGGCAGGACGCGCT CTGGCGCGAATATTTCGACAAATTGAAGGCGGCGGGCGTCGAGCGGGACGCGCCGATGCCGGCGGACTCGCTGCCGCGAG GCCACCACCACTGA
Upstream 100 bases:
>100_bases CGGTGTCCGACGCGCTGCTGCGGCTGCGCGCCGCGCAGGCGACCCTTCTGCACAACGCGGTGCACGAGGAAATCGAGCAG GCGGTGAGCGGAGGCCGCGC
Downstream 100 bases:
>100_bases ACGACGGCGCCGGCGGCGCCGTTTGCCATTGATAGAGGATCAACGCGATGAGCAAAACCCACTTCGGCTTCGAAACCGTC GAGGAAAACGAAAAAGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSGQAAAAPVPSGIVVHAVSRVLELQYPSGECFRVPFELMRVYSPSAEVRGHGPGQETLQTGKREVTVTALEPVGNYALK PTFSDGHSTGIYSWALLYELATRQDALWREYFDKLKAAGVERDAPMPADSLPRGHHH
Sequences:
>Translated_137_residues MSGQAAAAPVPSGIVVHAVSRVLELQYPSGECFRVPFELMRVYSPSAEVRGHGPGQETLQTGKREVTVTALEPVGNYALK PTFSDGHSTGIYSWALLYELATRQDALWREYFDKLKAAGVERDAPMPADSLPRGHHH >Mature_136_residues SGQAAAAPVPSGIVVHAVSRVLELQYPSGECFRVPFELMRVYSPSAEVRGHGPGQETLQTGKREVTVTALEPVGNYALKP TFSDGHSTGIYSWALLYELATRQDALWREYFDKLKAAGVERDAPMPADSLPRGHHH
Specific function: Unknown
COG id: COG3536
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14989; Mature: 14858
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGQAAAAPVPSGIVVHAVSRVLELQYPSGECFRVPFELMRVYSPSAEVRGHGPGQETLQ CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCHHHHH TGKREVTVTALEPVGNYALKPTFSDGHSTGIYSWALLYELATRQDALWREYFDKLKAAGV CCCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ERDAPMPADSLPRGHHH CCCCCCCCCCCCCCCCC >Mature Secondary Structure SGQAAAAPVPSGIVVHAVSRVLELQYPSGECFRVPFELMRVYSPSAEVRGHGPGQETLQ CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCHHHHH TGKREVTVTALEPVGNYALKPTFSDGHSTGIYSWALLYELATRQDALWREYFDKLKAAGV CCCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ERDAPMPADSLPRGHHH CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA