| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is cusB [H]
Identifier: 126452324
GI number: 126452324
Start: 304420
End: 305991
Strand: Direct
Name: cusB [H]
Synonym: BURPS1106A_0331
Alternate gene names: 126452324
Gene position: 304420-305991 (Clockwise)
Preceding gene: 126455001
Following gene: 126452286
Centisome position: 7.63
GC content: 70.8
Gene sequence:
>1572_bases ATGAACCATATTCGCTTGACCCGCGCGGCGCTGGCCGTGCTTGCCGCCGTCGCGCTGTCCGCGGCCGGCTACTTCGCCGG CGCTCGCTTCGGCGCGCATGTCGACGTCGCGCATCGCGCGCACGCCACGAACACCACGAACGCCGTCGACGGAGCCGATG CGAAGCCGGGCAGAAAAGTGCTGTACTGGCGCGATCCGATGGTGCCGAACCAGCATTTCGACAAGCCCGGCCCGTCGCCG TTCATGGACATGCCCCTCGAACCCGTCTATGCGGACGACGGCGGCGGCGCGCCGGGCGTGCGCATCGATCCCGGCCTGCA ACAGAACCTCGGCATCCGCTATGCGAAGGTGCGGCGGCGTGACGTCGACGAAGGCTTCGACGCGGTCGGCACGACGCAAT TCGACGAGTCGCGCACGGCCGTCGTGCAATCGCGCGTGACCGGTTATGTCGACCGGTTGTACGCGAGCGCGCCGTTGCAG CGCATCGCGAAGGGCGCGCCGATCGCCTCGCTGTTCGTGCCCGACTGGCTCGCGCCGCAGGAGGAATATCTCGCGCTCAA GCGCGGCGCGATGGACGAGGCGCTGCTTGCCGCTTCGCGTGCGCGGATGCGCGCGCTATCGATTCCCGATAGCGTGATCG CGAATCTCGACCGGACAGGCCGCGCGCAGACGCATATCGTGCTCGCCTCGCCGGAGACGGGCGTCGTCAGCGAGCTGAAC GTGCGCGACGGCGCGATGGTGACGCCCGGGCAGACGCTCGCGAAGATCGCGGGGCTGTCGACGCTGTGGGCCGTCATCGA CGTGCCGGAGGCGCTCGCGTCCGGCGTGCGTCCCGGCATGCGCGTCGACGCGACATTCGAGGGCGACCCGCAGCGGCGCG TGAGCGGCGCGATTCGCGAGATCCTGCCGGGCGTGAACGCGACGACGCGCACGCTGCAGGCGCGGCTCGAGCTCGACAAT CGCGCGCTCGCGCTCACGCCGGGCATGCTGATGCGCGCGCGCGTCGGCGCATCGCATGCGGCGTCGCGGCTCGTCGTGCC GTCCGATGCGGTGATCGCGACGGGCAAGCGCTCGGTCGTGATCGTCAGGACGGCGGACGATCGGTTGCGGCCGGCGGACG TGACGGTCGGCCGCGATGCCGGAGACGAAACCGAGGTGCTGGCCGGGCTCGAAGAAGGCGAAACGGTCGTCGCGTCCGGC CAGTTCCTGATCGATTCCGAGGCGAGCCTGAAATCGGTGCTGCCGCGCCTCGAAGCCGACGCATCCGGCGCGCTCGCCGC GCGTGCGACGCGGCCGCCGGCGCGATCATCGCCGCCGGCTGCGCAGGCGGGCGGTGCCGCGCCGGTCTACGAAACCACCG GCAAGGTGGAGAAGATCACCGCGGCCGACATCACGTTCTCGCATCAGCCGGTGCCGGCGCTCGGCTGGGGCGCGATGACG ATGTCGTTCGACAAGCCCGCGCCCGCCGCGTTCGCGAACGTGAAGGCGGGTGACACGGTGCGCTTCGCGTTCGAGGCGAG CGGCGACGGCTATCGGCTGACGAAGGTCGAACCGGTCGGAGGCGCCCGATGA
Upstream 100 bases:
>100_bases GTGCTCGATCTCGAACGCGACGTCGCGCGAGCGTGGGCGCAGCTCGACTATCAGATCGTCCCGTCGGCGATGCTCGCCGC CGCACAGTGAAGGAGCGGAC
Downstream 100 bases:
>100_bases TCGCGCACGTCATTCGATGGTCGATTCGCAATCGCCTGCTCGTGCTGCTCGCGACCGCGCTCGTCGCCGCATGGGGCGTG GTGTCGCTGAACCGCACGCC
Product: RND family efflux transporter MFP subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MNHIRLTRAALAVLAAVALSAAGYFAGARFGAHVDVAHRAHATNTTNAVDGADAKPGRKVLYWRDPMVPNQHFDKPGPSP FMDMPLEPVYADDGGGAPGVRIDPGLQQNLGIRYAKVRRRDVDEGFDAVGTTQFDESRTAVVQSRVTGYVDRLYASAPLQ RIAKGAPIASLFVPDWLAPQEEYLALKRGAMDEALLAASRARMRALSIPDSVIANLDRTGRAQTHIVLASPETGVVSELN VRDGAMVTPGQTLAKIAGLSTLWAVIDVPEALASGVRPGMRVDATFEGDPQRRVSGAIREILPGVNATTRTLQARLELDN RALALTPGMLMRARVGASHAASRLVVPSDAVIATGKRSVVIVRTADDRLRPADVTVGRDAGDETEVLAGLEEGETVVASG QFLIDSEASLKSVLPRLEADASGALAARATRPPARSSPPAAQAGGAAPVYETTGKVEKITAADITFSHQPVPALGWGAMT MSFDKPAPAAFANVKAGDTVRFAFEASGDGYRLTKVEPVGGAR
Sequences:
>Translated_523_residues MNHIRLTRAALAVLAAVALSAAGYFAGARFGAHVDVAHRAHATNTTNAVDGADAKPGRKVLYWRDPMVPNQHFDKPGPSP FMDMPLEPVYADDGGGAPGVRIDPGLQQNLGIRYAKVRRRDVDEGFDAVGTTQFDESRTAVVQSRVTGYVDRLYASAPLQ RIAKGAPIASLFVPDWLAPQEEYLALKRGAMDEALLAASRARMRALSIPDSVIANLDRTGRAQTHIVLASPETGVVSELN VRDGAMVTPGQTLAKIAGLSTLWAVIDVPEALASGVRPGMRVDATFEGDPQRRVSGAIREILPGVNATTRTLQARLELDN RALALTPGMLMRARVGASHAASRLVVPSDAVIATGKRSVVIVRTADDRLRPADVTVGRDAGDETEVLAGLEEGETVVASG QFLIDSEASLKSVLPRLEADASGALAARATRPPARSSPPAAQAGGAAPVYETTGKVEKITAADITFSHQPVPALGWGAMT MSFDKPAPAAFANVKAGDTVRFAFEASGDGYRLTKVEPVGGAR >Mature_523_residues MNHIRLTRAALAVLAAVALSAAGYFAGARFGAHVDVAHRAHATNTTNAVDGADAKPGRKVLYWRDPMVPNQHFDKPGPSP FMDMPLEPVYADDGGGAPGVRIDPGLQQNLGIRYAKVRRRDVDEGFDAVGTTQFDESRTAVVQSRVTGYVDRLYASAPLQ RIAKGAPIASLFVPDWLAPQEEYLALKRGAMDEALLAASRARMRALSIPDSVIANLDRTGRAQTHIVLASPETGVVSELN VRDGAMVTPGQTLAKIAGLSTLWAVIDVPEALASGVRPGMRVDATFEGDPQRRVSGAIREILPGVNATTRTLQARLELDN RALALTPGMLMRARVGASHAASRLVVPSDAVIATGKRSVVIVRTADDRLRPADVTVGRDAGDETEVLAGLEEGETVVASG QFLIDSEASLKSVLPRLEADASGALAARATRPPARSSPPAAQAGGAAPVYETTGKVEKITAADITFSHQPVPALGWGAMT MSFDKPAPAAFANVKAGDTVRFAFEASGDGYRLTKVEPVGGAR
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=365, Percent_Identity=37.8082191780822, Blast_Score=249, Evalue=3e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55063; Mature: 55063
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHIRLTRAALAVLAAVALSAAGYFAGARFGAHVDVAHRAHATNTTNAVDGADAKPGRKV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCEE LYWRDPMVPNQHFDKPGPSPFMDMPLEPVYADDGGGAPGVRIDPGLQQNLGIRYAKVRRR EEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCEEHHHHHH DVDEGFDAVGTTQFDESRTAVVQSRVTGYVDRLYASAPLQRIAKGAPIASLFVPDWLAPQ CHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCH EEYLALKRGAMDEALLAASRARMRALSIPDSVIANLDRTGRAQTHIVLASPETGVVSELN HHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCCEEEEEEECCCCCCEEECC VRDGAMVTPGQTLAKIAGLSTLWAVIDVPEALASGVRPGMRVDATFEGDPQRRVSGAIRE CCCCCEECCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH ILPGVNATTRTLQARLELDNRALALTPGMLMRARVGASHAASRLVVPSDAVIATGKRSVV HHCCCCHHHHHHHEEEEECCCEEEECCCHHHHHHCCCHHHHCEEECCCCCEEECCCCEEE IVRTADDRLRPADVTVGRDAGDETEVLAGLEEGETVVASGQFLIDSEASLKSVLPRLEAD EEECCCCCCCCCCEEECCCCCCHHHHHHCCCCCCEEEECCCEEEECCHHHHHHHHHHCCC ASGALAARATRPPARSSPPAAQAGGAAPVYETTGKVEKITAADITFSHQPVPALGWGAMT CCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEE MSFDKPAPAAFANVKAGDTVRFAFEASGDGYRLTKVEPVGGAR EECCCCCCCCEEECCCCCEEEEEEEECCCCEEEEEECCCCCCC >Mature Secondary Structure MNHIRLTRAALAVLAAVALSAAGYFAGARFGAHVDVAHRAHATNTTNAVDGADAKPGRKV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCEE LYWRDPMVPNQHFDKPGPSPFMDMPLEPVYADDGGGAPGVRIDPGLQQNLGIRYAKVRRR EEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCEEHHHHHH DVDEGFDAVGTTQFDESRTAVVQSRVTGYVDRLYASAPLQRIAKGAPIASLFVPDWLAPQ CHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCH EEYLALKRGAMDEALLAASRARMRALSIPDSVIANLDRTGRAQTHIVLASPETGVVSELN HHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHCCCCCCCCEEEEEEECCCCCCEEECC VRDGAMVTPGQTLAKIAGLSTLWAVIDVPEALASGVRPGMRVDATFEGDPQRRVSGAIRE CCCCCEECCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH ILPGVNATTRTLQARLELDNRALALTPGMLMRARVGASHAASRLVVPSDAVIATGKRSVV HHCCCCHHHHHHHEEEEECCCEEEECCCHHHHHHCCCHHHHCEEECCCCCEEECCCCEEE IVRTADDRLRPADVTVGRDAGDETEVLAGLEEGETVVASGQFLIDSEASLKSVLPRLEAD EEECCCCCCCCCCEEECCCCCCHHHHHHCCCCCCEEEECCCEEEECCHHHHHHHHHHCCC ASGALAARATRPPARSSPPAAQAGGAAPVYETTGKVEKITAADITFSHQPVPALGWGAMT CCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEE MSFDKPAPAAFANVKAGDTVRFAFEASGDGYRLTKVEPVGGAR EECCCCCCCCEEECCCCCEEEEEEEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]