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The map label for this gene is fimI [C]

Identifier: 126452242

GI number: 126452242

Start: 2081211

End: 2082182

Strand: Reverse

Name: fimI [C]

Synonym: BURPS1106A_2087

Alternate gene names: 126452242

Gene position: 2082182-2081211 (Counterclockwise)

Preceding gene: 126454737

Following gene: 126453031

Centisome position: 52.21

GC content: 66.15

Gene sequence:

>972_bases
ATGCGATTGAAACGCGAACGGCGTGCGCGGCGCTCCCGCCTGCCCGCGGCGGCAGGCGGCCTGTGGCTTGTCGTTGCCGC
GCTGCCGCCCGGCGCACGGGCAGCGACTTGCGAAGGCGACAAGACACTCGTCACGCTTCCGGCCATCGCGGTCGCGGCCG
ACGCGCCGGTGGGAACGGTGCTGTGGCGTCAGAAGGGGATCGCTTTCAGCACCTATTGCACGTTGGGATGGTTCGACACC
AGCAACATTTATGTCTGGCGCGCCGACCTGCGCTCGGCGCTGCAGCCATATGGGCTGACGTTCTGGCTGACTTACGGAGG
GCAGGGCGGCAACACCGCGCTGCAAATCAAGGAGCCGATGGTCGTCGATCTCGGCGGAAAGGCCGGCTATGCGAGCGGCT
CCGTCGACCTGGAACTGAGGAAGACGGGCGTGACGCCGGCGCAAGGCGTCGTCGGCGCGGCGGACATCCCCGCGTTCTAT
CTCGATAGCAATACGAACTACAACAAAGGCTCGCACTACATCCGCGGGCTGACCAACATTTCGTTCGTCTCCTATACCTG
CGACATCGATACGGGGTCGCGCAGCATGAACGTGCCGCTCGGCGACGTGCGCGTCGATCGCTTCAGCGGCATCGGCTCCA
CCTTCGCGGATCGGAATTTCGGCATCGGCATGACGTGCACGCAGCCGGCCGGCACGTACGATATCGCGCTGACGTTTTCC
GCGACGGCGGACAGCTCCGGCGCACCGGGCGTGCTCGCGATTACGCAAGGGGCGTCTTCCGCGTCCGGAGTCGGCATTCA
GTTGCTGATGAACGGCTCGCCGGTGACTTTCGGCGCCGTCCTCGACGCGGGCAGCGCGACCGCGGGCGCGACGCTGACGA
TCCCGATGACGGCACGCTATTATCAGACCGGCAGTGTCGTGACGCCGGGCGCGGCGAACGGGATCGCGACGTTCGCCGTC
AGCTACAAGTGA

Upstream 100 bases:

>100_bases
TCGTCGTTCGCTGGGGGGCGGCGCGACAGAATCGCTGCCGCGTGAATTACGCGCTGCCCGGAAAGGCGGCGATCGGCGCG
TACTTGGCCGTGGAGGCGAT

Downstream 100 bases:

>100_bases
CGCGTGCGGGCGGTGCGGACGGGGCCGCTCGCACGCCCGTTCGCGGGCCACGCCCATCCGCCGTCGCGCCGCCGGATTCT
TAGAACTTCGATATCCGAAT

Product: major fimbrial subunit protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MRLKRERRARRSRLPAAAGGLWLVVAALPPGARAATCEGDKTLVTLPAIAVAADAPVGTVLWRQKGIAFSTYCTLGWFDT
SNIYVWRADLRSALQPYGLTFWLTYGGQGGNTALQIKEPMVVDLGGKAGYASGSVDLELRKTGVTPAQGVVGAADIPAFY
LDSNTNYNKGSHYIRGLTNISFVSYTCDIDTGSRSMNVPLGDVRVDRFSGIGSTFADRNFGIGMTCTQPAGTYDIALTFS
ATADSSGAPGVLAITQGASSASGVGIQLLMNGSPVTFGAVLDAGSATAGATLTIPMTARYYQTGSVVTPGAANGIATFAV
SYK

Sequences:

>Translated_323_residues
MRLKRERRARRSRLPAAAGGLWLVVAALPPGARAATCEGDKTLVTLPAIAVAADAPVGTVLWRQKGIAFSTYCTLGWFDT
SNIYVWRADLRSALQPYGLTFWLTYGGQGGNTALQIKEPMVVDLGGKAGYASGSVDLELRKTGVTPAQGVVGAADIPAFY
LDSNTNYNKGSHYIRGLTNISFVSYTCDIDTGSRSMNVPLGDVRVDRFSGIGSTFADRNFGIGMTCTQPAGTYDIALTFS
ATADSSGAPGVLAITQGASSASGVGIQLLMNGSPVTFGAVLDAGSATAGATLTIPMTARYYQTGSVVTPGAANGIATFAV
SYK
>Mature_323_residues
MRLKRERRARRSRLPAAAGGLWLVVAALPPGARAATCEGDKTLVTLPAIAVAADAPVGTVLWRQKGIAFSTYCTLGWFDT
SNIYVWRADLRSALQPYGLTFWLTYGGQGGNTALQIKEPMVVDLGGKAGYASGSVDLELRKTGVTPAQGVVGAADIPAFY
LDSNTNYNKGSHYIRGLTNISFVSYTCDIDTGSRSMNVPLGDVRVDRFSGIGSTFADRNFGIGMTCTQPAGTYDIALTFS
ATADSSGAPGVLAITQGASSASGVGIQLLMNGSPVTFGAVLDAGSATAGATLTIPMTARYYQTGSVVTPGAANGIATFAV
SYK

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 33553; Mature: 33553

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKRERRARRSRLPAAAGGLWLVVAALPPGARAATCEGDKTLVTLPAIAVAADAPVGTV
CCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEECCCCCEEEEECEEEEECCCCCCEE
LWRQKGIAFSTYCTLGWFDTSNIYVWRADLRSALQPYGLTFWLTYGGQGGNTALQIKEPM
EECCCCCEEEEEEEEEEEECCCEEEEHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCE
VVDLGGKAGYASGSVDLELRKTGVTPAQGVVGAADIPAFYLDSNTNYNKGSHYIRGLTNI
EEEECCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCEEEEECCCCCCCCCCEEEECCCE
SFVSYTCDIDTGSRSMNVPLGDVRVDRFSGIGSTFADRNFGIGMTCTQPAGTYDIALTFS
EEEEEEEEECCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEE
ATADSSGAPGVLAITQGASSASGVGIQLLMNGSPVTFGAVLDAGSATAGATLTIPMTARY
ECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEEE
YQTGSVVTPGAANGIATFAVSYK
EECCCEECCCCCCCEEEEEEEEC
>Mature Secondary Structure
MRLKRERRARRSRLPAAAGGLWLVVAALPPGARAATCEGDKTLVTLPAIAVAADAPVGTV
CCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEECCCCCEEEEECEEEEECCCCCCEE
LWRQKGIAFSTYCTLGWFDTSNIYVWRADLRSALQPYGLTFWLTYGGQGGNTALQIKEPM
EECCCCCEEEEEEEEEEEECCCEEEEHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCE
VVDLGGKAGYASGSVDLELRKTGVTPAQGVVGAADIPAFYLDSNTNYNKGSHYIRGLTNI
EEEECCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCEEEEECCCCCCCCCCEEEECCCE
SFVSYTCDIDTGSRSMNVPLGDVRVDRFSGIGSTFADRNFGIGMTCTQPAGTYDIALTFS
EEEEEEEEECCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEE
ATADSSGAPGVLAITQGASSASGVGIQLLMNGSPVTFGAVLDAGSATAGATLTIPMTARY
ECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEEE
YQTGSVVTPGAANGIATFAVSYK
EECCCEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2890624 [H]