| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is pcaK [H]
Identifier: 126452161
GI number: 126452161
Start: 3132138
End: 3133493
Strand: Reverse
Name: pcaK [H]
Synonym: BURPS1106A_3214
Alternate gene names: 126452161
Gene position: 3133493-3132138 (Counterclockwise)
Preceding gene: 126454817
Following gene: 126453053
Centisome position: 78.56
GC content: 71.39
Gene sequence:
>1356_bases ATGAGCGCGGCGGCGAATCCCGCGCGCGTGCTCGAGATCGAGCGCGTGATCGACGACACGCACCGGCCCGCGTTTCACGC GATGCTGCTCGCGCTTTGCGGGCTGTGCCTCGTGATCGACGGTTTCGACGCGCAGGCGATGGGCTACGTCGCACCGAGCG TGATCGCCGAATGGGGTGTGAAGAAGCAGGCGCTCGGGCCCGTCTTCAGCGCGAGCCTGTTCGGCATGCTGCTCGGCGCG CTCGGCCTGTCGGTGCTCGCCGATCGGATCGGCCGGCGGCCCGTGCTGATCGGCGCGACGCTGTTCTTCGCGCTCGCGAT GCTCGCGACGCCGTTCGCGACGTCGATCCCGATATTGATCGCGCTGCGCTTCGTCACGGGCCTGGGGCTCGGCTGCATCA TGCCGAACGCGATGGCGCTCGTCGGCGAATGCAGCCCGAGCGCGCACCGCGTGAAGCGGATGATGATCGTGTCGTGCGGC TTCACGCTCGGCGCGGCGCTGGGCGGGTTCGTCAGCGCCGCGCTGATTCCCGCGTTCGGCTGGCGCGCGGTGTTCTTCGT CGGCGGCGCGGTGCCGCTCGCGCTCGCGGCCGCGATGGCCGCGAGCCTGCCCGAATCGCCGCAGTTGCTCGTGCTGCGCG GCCGGCACGACGCGGCGCGCGCGTGGCTCGCGAAGTTCGCGCCGCGGCTCGCGGTCCCGCCCGATACGCGGCTTGTCGTG CGCGAAGCGGGACCCCGGGGCGCGCCCGTCGCCGAGCTGTTCCGCTCGGGACGCGCGCGCGTCACGCTGCTGTTGTGGGC GATCAACTTCATGAACCTGATCGACCTGTACTTCCTGTCGAACTGGCTGCCGACCGTGATGCGCGACGCGGGCTACGCGA GCGGCACGGCCGTCATCGTCGGCACGGTGCTGCAGACGGGCGGCGTGATCGGCACGCTGTCGCTCGGCTGGTTCATCGAA CGGCATGGTTTCGCGCGCGTGCTGTTCGCGTGCTTCGCGTGCGCGACGATCGCGATCGGCCTGATCGGCTCGGTCGCGCA CGCGTTCGTCTGGCTGCTCGCAGCCGTGTTCGTCGGCGGCTTTTGCGTCGTCGGCGGACAGCCCGCGGTCAATGCGCTCG CGGGCCATTATTACCCGACGTCGCTGCGCTCGACGGGCATCGGCTGGAGTCTCGGCGTGGGCCGCGTCGGCTCCGTGCTC GGGCCGCTCGTCGGCGGGCAACTGATCGCGCTCGGCTGGTCGAACGACGCGCTGTTTCACGCGGCGGCCGTGCCGGTGCT GTGCTCGGCCGTCTTCGTGATCGGCCTCGCGAGCGTGACGCGGCGGCGCGGCACGGCCGCGCCGAACGTCGCTTGA
Upstream 100 bases:
>100_bases CGAACCAGATCGGCGATCTCGACGTGCTGCGCGAGGCGATGGCGCTCGCGCGCAGCGGCGCGGCCGTGCTCGAAGGCGCG CCCGGCGCGCCCGCGCTGCA
Downstream 100 bases:
>100_bases ATGGAGAGAACGACAATCATGACATTGGATTTTTCGAAACCGGGCGAAGCCGGCTATCAGAGCGGCTTCGCGAACGAATT CGCGACCGAGGCGCTGCCGG
Product: 4-hydroxybenzoate transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSAAANPARVLEIERVIDDTHRPAFHAMLLALCGLCLVIDGFDAQAMGYVAPSVIAEWGVKKQALGPVFSASLFGMLLGA LGLSVLADRIGRRPVLIGATLFFALAMLATPFATSIPILIALRFVTGLGLGCIMPNAMALVGECSPSAHRVKRMMIVSCG FTLGAALGGFVSAALIPAFGWRAVFFVGGAVPLALAAAMAASLPESPQLLVLRGRHDAARAWLAKFAPRLAVPPDTRLVV REAGPRGAPVAELFRSGRARVTLLLWAINFMNLIDLYFLSNWLPTVMRDAGYASGTAVIVGTVLQTGGVIGTLSLGWFIE RHGFARVLFACFACATIAIGLIGSVAHAFVWLLAAVFVGGFCVVGGQPAVNALAGHYYPTSLRSTGIGWSLGVGRVGSVL GPLVGGQLIALGWSNDALFHAAAVPVLCSAVFVIGLASVTRRRGTAAPNVA
Sequences:
>Translated_451_residues MSAAANPARVLEIERVIDDTHRPAFHAMLLALCGLCLVIDGFDAQAMGYVAPSVIAEWGVKKQALGPVFSASLFGMLLGA LGLSVLADRIGRRPVLIGATLFFALAMLATPFATSIPILIALRFVTGLGLGCIMPNAMALVGECSPSAHRVKRMMIVSCG FTLGAALGGFVSAALIPAFGWRAVFFVGGAVPLALAAAMAASLPESPQLLVLRGRHDAARAWLAKFAPRLAVPPDTRLVV REAGPRGAPVAELFRSGRARVTLLLWAINFMNLIDLYFLSNWLPTVMRDAGYASGTAVIVGTVLQTGGVIGTLSLGWFIE RHGFARVLFACFACATIAIGLIGSVAHAFVWLLAAVFVGGFCVVGGQPAVNALAGHYYPTSLRSTGIGWSLGVGRVGSVL GPLVGGQLIALGWSNDALFHAAAVPVLCSAVFVIGLASVTRRRGTAAPNVA >Mature_450_residues SAAANPARVLEIERVIDDTHRPAFHAMLLALCGLCLVIDGFDAQAMGYVAPSVIAEWGVKKQALGPVFSASLFGMLLGAL GLSVLADRIGRRPVLIGATLFFALAMLATPFATSIPILIALRFVTGLGLGCIMPNAMALVGECSPSAHRVKRMMIVSCGF TLGAALGGFVSAALIPAFGWRAVFFVGGAVPLALAAAMAASLPESPQLLVLRGRHDAARAWLAKFAPRLAVPPDTRLVVR EAGPRGAPVAELFRSGRARVTLLLWAINFMNLIDLYFLSNWLPTVMRDAGYASGTAVIVGTVLQTGGVIGTLSLGWFIER HGFARVLFACFACATIAIGLIGSVAHAFVWLLAAVFVGGFCVVGGQPAVNALAGHYYPTSLRSTGIGWSLGVGRVGSVLG PLVGGQLIALGWSNDALFHAAAVPVLCSAVFVIGLASVTRRRGTAAPNVA
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=430, Percent_Identity=25.1162790697674, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI166064021, Length=368, Percent_Identity=29.0760869565217, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI8923870, Length=373, Percent_Identity=27.8820375335121, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI213021148, Length=446, Percent_Identity=23.542600896861, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI7662270, Length=224, Percent_Identity=23.6607142857143, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI87081723, Length=421, Percent_Identity=33.9667458432304, Blast_Score=174, Evalue=9e-45, Organism=Escherichia coli, GI87082231, Length=404, Percent_Identity=24.5049504950495, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1786229, Length=394, Percent_Identity=21.0659898477157, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788068, Length=400, Percent_Identity=23.75, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082404, Length=393, Percent_Identity=22.1374045801527, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87082159, Length=390, Percent_Identity=24.6153846153846, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1788074, Length=247, Percent_Identity=27.5303643724696, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1789207, Length=420, Percent_Identity=25.952380952381, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI32564663, Length=432, Percent_Identity=22.4537037037037, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI19922874, Length=424, Percent_Identity=22.6415094339623, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24640198, Length=470, Percent_Identity=23.8297872340426, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24640196, Length=470, Percent_Identity=23.8297872340426, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24640200, Length=470, Percent_Identity=23.8297872340426, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI161077756, Length=463, Percent_Identity=22.6781857451404, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI19922616, Length=374, Percent_Identity=22.9946524064171, Blast_Score=72, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46866; Mature: 46735
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAANPARVLEIERVIDDTHRPAFHAMLLALCGLCLVIDGFDAQAMGYVAPSVIAEWGV CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC KKQALGPVFSASLFGMLLGALGLSVLADRIGRRPVLIGATLFFALAMLATPFATSIPILI CHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHHHH ALRFVTGLGLGCIMPNAMALVGECSPSAHRVKRMMIVSCGFTLGAALGGFVSAALIPAFG HHHHHHHCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC WRAVFFVGGAVPLALAAAMAASLPESPQLLVLRGRHDAARAWLAKFAPRLAVPPDTRLVV HHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEE REAGPRGAPVAELFRSGRARVTLLLWAINFMNLIDLYFLSNWLPTVMRDAGYASGTAVIV ECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH GTVLQTGGVIGTLSLGWFIERHGFARVLFACFACATIAIGLIGSVAHAFVWLLAAVFVGG HHHHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FCVVGGQPAVNALAGHYYPTSLRSTGIGWSLGVGRVGSVLGPLVGGQLIALGWSNDALFH EEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHH AAAVPVLCSAVFVIGLASVTRRRGTAAPNVA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SAAANPARVLEIERVIDDTHRPAFHAMLLALCGLCLVIDGFDAQAMGYVAPSVIAEWGV CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC KKQALGPVFSASLFGMLLGALGLSVLADRIGRRPVLIGATLFFALAMLATPFATSIPILI CHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHHHH ALRFVTGLGLGCIMPNAMALVGECSPSAHRVKRMMIVSCGFTLGAALGGFVSAALIPAFG HHHHHHHCCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC WRAVFFVGGAVPLALAAAMAASLPESPQLLVLRGRHDAARAWLAKFAPRLAVPPDTRLVV HHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEE REAGPRGAPVAELFRSGRARVTLLLWAINFMNLIDLYFLSNWLPTVMRDAGYASGTAVIV ECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH GTVLQTGGVIGTLSLGWFIERHGFARVLFACFACATIAIGLIGSVAHAFVWLLAAVFVGG HHHHHCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FCVVGGQPAVNALAGHYYPTSLRSTGIGWSLGVGRVGSVLGPLVGGQLIALGWSNDALFH EEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHH AAAVPVLCSAVFVIGLASVTRRRGTAAPNVA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]